FFCP PHASE1:Hg19::chr10:27147823..27147834,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:27147823..27147834,+ | |||
|description=CAGE_peak_at_chr10:27147823..27147834,+ | |description=CAGE_peak_at_chr10:27147823..27147834,+ | ||
|id=chr10:27147823..27147834,+ | |id=chr10:27147823..27147834,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.55e-19!140;CL:0000037!2.65e-17!172;CL:0000566!2.65e-17!172;CL:0002031!3.28e-17!124;CL:0002032!1.58e-16!165;CL:0000837!1.58e-16!165;CL:0000988!1.26e-15!182;CL:0002087!4.40e-15!119;CL:0000766!6.48e-10!76;CL:0000838!2.34e-09!52;CL:0000542!4.31e-09!53;CL:0000051!4.31e-09!53;CL:0000763!2.34e-08!112;CL:0000049!2.34e-08!112;CL:0002057!3.42e-08!42;CL:0000839!5.99e-08!70;CL:0000557!6.84e-08!71;CL:0000767!1.12e-07!3;CL:0000860!2.10e-07!45;CL:0000623!2.74e-07!3;CL:0000825!2.74e-07!3 | |ontology_enrichment_celltype=CL:0000738!1.55e-19!140;CL:0000037!2.65e-17!172;CL:0000566!2.65e-17!172;CL:0002031!3.28e-17!124;CL:0002032!1.58e-16!165;CL:0000837!1.58e-16!165;CL:0000988!1.26e-15!182;CL:0002087!4.40e-15!119;CL:0000766!6.48e-10!76;CL:0000838!2.34e-09!52;CL:0000542!4.31e-09!53;CL:0000051!4.31e-09!53;CL:0000763!2.34e-08!112;CL:0000049!2.34e-08!112;CL:0002057!3.42e-08!42;CL:0000839!5.99e-08!70;CL:0000557!6.84e-08!71;CL:0000767!1.12e-07!3;CL:0000860!2.10e-07!45;CL:0000623!2.74e-07!3;CL:0000825!2.74e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.56e-12;2!CL:0001016;1.56e-12;2!CL:0002327;6.68e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.48e-12,2;CL:0001016,1.48e-12,2;CL:0002009,4.56e-09,61;CL:0000557,2.81e-08,67;CL:0002327,6.87e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.85e-08!14 | |ontology_enrichment_disease=DOID:1749!2.85e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;3.28e-23;1!DOID:3149;3.28e-23;1!DOID:3451;2.59e-12;2!DOID:4159;2.59e-12;2!DOID:0060122;2.59e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.13e-23,1;DOID:3149,5.13e-23,1;DOID:3451,3.24e-12,2;DOID:4159,3.24e-12,2;DOID:0060122,3.24e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.87e-07!102;UBERON:0003061!3.87e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;6.68e-07;4!UBERON:0000014;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.54e-07,76;UBERON:0001911,6.87e-07,4;UBERON:0005333,6.87e-07,4;UBERON:0008425,6.87e-07,4;UBERON:0005311,6.87e-07,4;UBERON:0001474,8.50e-07,82;UBERON:0000014,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0.0821005894499457,0,0.393364276848904,0.767658796194425,0.464448369948228,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,0,1.10799081706375,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,1.72372840368309,0.645484683583826,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0,0.580418477257168,0,0,0,0,0.434377689410233,0,0.368277635987565,1.26584954976354,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0,0,0.779873198196215,0,0,0,0,0,0,0,0,0.296573126324121,0.535081656179426,0,0,0,0.34362744548263,0.506039384039006,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,3.76145795351963,0.871901815541886,0,0.492663237895943,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0.383010740264733,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,1.00109485027145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.522355239482415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,3.86900977278975,0,1.0063040627978,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr10:27147823..27147834,+ | |short_description=p@chr10:27147823..27147834,+ | ||
}} | }} |
Latest revision as of 12:51, 23 July 2015
Short description: | p@chr10:27147823..27147834, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:27147823..27147834, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.48e-12 | 2 |
immature CD1a-positive Langerhans cell | 1.48e-12 | 2 |
macrophage dendritic cell progenitor | 4.56e-09 | 61 |
granulocyte monocyte progenitor cell | 2.81e-08 | 67 |
mammary gland epithelial cell | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.54e-07 | 76 |
mammary gland | 6.87e-07 | 4 |
mammary bud | 6.87e-07 | 4 |
mammary ridge | 6.87e-07 | 4 |
mammary placode | 6.87e-07 | 4 |
bone element | 8.50e-07 | 82 |
zone of skin | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.13e-23 | 1 |
keratoacanthoma | 5.13e-23 | 1 |
skin carcinoma | 3.24e-12 | 2 |
skin cancer | 3.24e-12 | 2 |
integumentary system cancer | 3.24e-12 | 2 |