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FFCP PHASE1:Mm9::chr5:54200871..54200922,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=67249
|EntrezGene=67249
|HGNC=
|HGNC=
|MCL_coexpression_id=797
|TSSclassifier=NA
|UniProt=Q8VDV7
|UniProt=Q8VDV7
|association_with_transcript=5bp_to_ENSMUST00000037337,NM_144517,uc008xln.2,uc008xlo.2_5end
|association_with_transcript=5bp_to_ENSMUST00000037337,NM_144517,uc008xln.2,uc008xlo.2_5end
|cluster_id=chr5:54200871..54200922,+
|description=CAGE_peak_1_at_Tbc1d19_5end
|description=CAGE_peak_1_at_Tbc1d19_5end
|id=chr5:54200871..54200922,+
|id=chr5:54200871..54200922,+
|ontology_enrichment_celltype=CL:0000393!1.57e-07!39;CL:0000211!1.57e-07!39
|ontology_enrichment_celltype=CL:0000393!1.57e-07!39;CL:0000211!1.57e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000393,1.57e-07,39;CL:0000211,1.57e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.79e-15!75;UBERON:0001016!4.79e-15!75;UBERON:0002346!9.83e-15!71;UBERON:0003075!9.83e-15!71;UBERON:0007284!9.83e-15!71;UBERON:0001017!1.75e-14!73;UBERON:0005743!1.75e-14!73;UBERON:0000033!2.39e-14!63;UBERON:0001049!6.68e-14!52;UBERON:0005068!6.68e-14!52;UBERON:0006241!6.68e-14!52;UBERON:0007135!6.68e-14!52;UBERON:0004121!4.59e-13!102;UBERON:0000924!4.59e-13!102;UBERON:0006601!4.59e-13!102;UBERON:0000955!6.43e-13!50;UBERON:0006238!6.43e-13!50;UBERON:0002616!2.38e-12!49;UBERON:0003056!9.86e-11!49;UBERON:0003080!2.57e-09!40;UBERON:0002020!4.76e-09!34;UBERON:0002780!7.14e-09!39;UBERON:0001890!7.14e-09!39;UBERON:0006240!7.14e-09!39;UBERON:0000025!7.17e-09!114;UBERON:0004111!1.12e-08!122;UBERON:0000153!8.07e-08!94;UBERON:0000468!1.93e-07!333;UBERON:0007811!1.95e-07!86;UBERON:0002791!6.15e-07!29;UBERON:0003528!6.15e-07!29;UBERON:0001893!6.15e-07!29;UBERON:0000475!9.83e-07!200
|ontology_enrichment_uberon=UBERON:0000073!4.79e-15!75;UBERON:0001016!4.79e-15!75;UBERON:0002346!9.83e-15!71;UBERON:0003075!9.83e-15!71;UBERON:0007284!9.83e-15!71;UBERON:0001017!1.75e-14!73;UBERON:0005743!1.75e-14!73;UBERON:0000033!2.39e-14!63;UBERON:0001049!6.68e-14!52;UBERON:0005068!6.68e-14!52;UBERON:0006241!6.68e-14!52;UBERON:0007135!6.68e-14!52;UBERON:0004121!4.59e-13!102;UBERON:0000924!4.59e-13!102;UBERON:0006601!4.59e-13!102;UBERON:0000955!6.43e-13!50;UBERON:0006238!6.43e-13!50;UBERON:0002616!2.38e-12!49;UBERON:0003056!9.86e-11!49;UBERON:0003080!2.57e-09!40;UBERON:0002020!4.76e-09!34;UBERON:0002780!7.14e-09!39;UBERON:0001890!7.14e-09!39;UBERON:0006240!7.14e-09!39;UBERON:0000025!7.17e-09!114;UBERON:0004111!1.12e-08!122;UBERON:0000153!8.07e-08!94;UBERON:0000468!1.93e-07!333;UBERON:0007811!1.95e-07!86;UBERON:0002791!6.15e-07!29;UBERON:0003528!6.15e-07!29;UBERON:0001893!6.15e-07!29;UBERON:0000475!9.83e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.46e-16,64;UBERON:0003075,7.46e-16,64;UBERON:0007284,7.46e-16,64;UBERON:0010314,3.95e-15,92;UBERON:0001016,4.76e-15,75;UBERON:0000073,1.11e-14,54;UBERON:0001017,1.74e-14,73;UBERON:0010371,4.22e-14,73;UBERON:0001049,6.65e-14,52;UBERON:0005068,6.65e-14,52;UBERON:0006241,6.65e-14,52;UBERON:0007135,6.65e-14,52;UBERON:0004121,1.28e-13,95;UBERON:0000924,1.28e-13,95;UBERON:0006601,1.28e-13,95;UBERON:0000955,1.47e-11,47;UBERON:0006238,1.47e-11,47;UBERON:0002616,5.24e-11,46;UBERON:0003056,9.82e-11,49;UBERON:0003080,2.56e-09,40;UBERON:0002020,4.74e-09,34;UBERON:0002780,7.12e-09,39;UBERON:0001890,7.12e-09,39;UBERON:0006240,7.12e-09,39;UBERON:0000025,7.49e-09,114;UBERON:0004111,1.16e-08,122;UBERON:0003528,6.14e-07,29;UBERON:0002791,6.14e-07,29;UBERON:0001893,6.14e-07,29
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3,3.11075935900303,6.83473244395618,22.5477175473676,12.7089064137382,11.0857188606255,14.1949367491155,11.6243841129958,14.3612706667161,15.256441023948,11.7183946359555,13.6317147753424,24.8831644450786,24.1945205256607,5.68820017130721,8.5144590421869,7.08705604437308,8.31493267057888,8.77230808770659,7.3512101269068,7.69250876927801,6.79371825003055,7.16861794631848,7.84930108546498,5.54544018252623,7.50425681696094,6.15755786498109,9.93453668543336,7.48210265930198,5.54964883435162,5.9211145362254,6.04384618910682,10.4322380777383,10.8855835761686,13.9195234443121,9.21784030039983,10.0314420807073,12.9892923801925,17.9526842237799,14.8952833494243,24.0594455281163,22.6077231524312,15.8632718451837,15.5255175053315,20.2644541450899,18.5788387683524,16.0505696643064,10.3787347584177,26.7346665178691,17.5855613926758,13.1277627216879,9.64220548088719,10.6629234901008,15.1127774905098,13.598313777767,11.2321723357135,12.8875577999537,17.4900716924265,13.7697229211836,14.7017166727715,16.1983635584319,15.0480928663707,15.2413981210584,13.7902347874378,16.5901929598786,11.9504911232959,14.2782952530365,7.88599280486455,14.0205886865877,10.4911923576821,13.5172167468066,13.3635320189769,15.3998586362851,15.3659497213129,10.7858581689516,14.2594319538155,12.906272248128,13.64302708428,12.7070782264477,17.5969348562966,13.3245683419931,10.8027702149439,15.9878769880285,10.7608539884888,12.4625211348013,10.9034349279241,7.27951683094401,12.9845987947436
|phase1_expression=20.178754735204,0.348975407639361,0,0,0,3.02182689441402,1.40167584357315,4.13194635013044,0,0.70219357896598,0,1.19658238493005,1.19840510951844,3.05971408466491,1.66554880907831,1.01237633694913,1.39912375625629,1.26184866143295,2.19383093769182,1.69755860719212,20.66551950671,7.34753038886551,7.57479388502913,1.59992422793407,2.75291137280604,0,0,0.861884930743556,0.570070258369122,1.26015064879965,1.33038306393183,0.635030673459631,0.61506478758457,0,5.19932915552294,4.48833542467929,2.6542016314108,0.418531630736908,1.5626706890476,2.61761871986899,0.588231488031014,1.36609096991689,0.485510353031154,17.877348152532,19.2616169317078,21.2914232507551,18.7773922643529,5.66865406589161,8.12838876117546,12.4435135407541,5.31948402176378,2.87505128729943,1.34226084846189,0.725362142011344,1.34437519656986,10.8048963135098,17.1920063963254,10.3134418455488,14.9714181036102,11.6378015439847,13.3104594736298,8.4711133017283,4.4464739805557,3.5995988691256,1.97773272513395,4.9733608046227,6.89080254192331,9.98967593836042,15.0349937847293,9.31540974488665,13.0401476037857,15.7108041422092,21.4242484723065,12.4940615199253,8.05101956553185,11.0306254393203,15.4162233399144,24.8990309266116,23.0409799884365,16.8814448294648,15.4614117688072,16.6692278578163,22.8930059181132,20.8222165711722,27.6564828476026,26.2219441071564,16.9422300150933,24.9775257405903,14.7666076999709,17.8348881852014,26.6675329605544,5.16254326188832,0.679971333707751,0.539703191637817,1.94932925234301,2.24013443548668,7.44355426698285,20.1107780642108,9.35229616570328,8.48014978824817,19.0138616698519,19.2489716121477,38.2207859559969,35.5533351576666,7.79367747640371,6.33399663687746,7.58286667522175,5.93756174539112,8.80388804400384,14.9926560455473,8.84775166507293,8.22056791442781,9.4552353874984,11.4549206819993,12.2292255421133,12.1896593589785,2.96633961281249,10.1219549843938,5.30766331169925,11.4854463462661,8.83366073841574,8.24287930329878,0,15.8101630386235,21.7824575085993,2.29911349687732,6.82946209683746,5.39912457894067,7.62421362438388,20.5213175984607,21.9600289352941,12.8167439155122,21.5542157038423,22.7586757023994,21.4021685896347,22.064811777215,14.7667077582959,6.71797641294502,12.8888606801174,6.73413938836717,11.5807194236806,16.5529515192101,16.5657159420921,19.4409215008072,18.7780737657665,19.7295129238669,16.8663104207512,12.6764651662118,9.26942369611222,13.615637772083,19.0027214097065,13.3709396780821,15.5706459566335,13.5818344943645,10.7006710932131,13.733364410476,8.42655824775882,4.63226232806487,5.39910648851626,10.3562886267751,15.0096678387902,9.7233513188948,13.2577051927718,13.3799677588235,12.1871019181029,16.2773761325285,12.0723030629829,10.3921154706781,13.8230273927324,17.4017511923841,12.1603214318784,10.5263990946239,10.0993053033883,11.4075455946316,22.2907345477975,20.5809224758569,0.991256348951394,1.05780226665418,13.4371597837197,13.9342003116263,12.7578786708872,7.66397393568702,6.0042071838115,8.75037880117772,2.37264530772256,3.29397909448022,7.28872105520782,6.16765063327568,7.01870713628832,3.59527763461689,5.18731319699266,3.58454291857861,9.48339504765408,14.5095611014356,14.6520056375005,14.8665469327079,16.0980564349129,14.9389296366379,22.0063149192415,19.6321496812871,22.2938193534752,20.1137377192535,1.77871576252289,7.34118465150814,4.12773889737726,2.9232074610031,4.05720242777006,3.85883455603867,3.05551022137704,4.89083433666378,3.72911021582581,2.74561413188081,7.18841032636773,4.46569137202204,4.99260276983297,4.2938409251009,4.12614051100398,3.37710464954357,17.9210594461607,15.7277871769502,20.6965520081373,16.4652733201932,15.4895563870411,16.9181320016234,17.377185784679,12.0982861671835,17.4975009957872,16.6098517236581,18.337298395611,13.764518436122,16.7504432409919,15.7667473853848,4.52373851817817,7.07077388964322,3.44234991113325,6.89841865761831,26.1697461680101,25.9037827368769,8.6885521049638,19.6927323219411,14.5133780931478,13.6653560503823,15.2950612390287,12.9043150894378,12.9223230967789,13.3045969470751,14.9779959619711,10.2289550268959,11.4633455604492,23.4564560987919,15.8972895433261,12.6426578603751,16.6144698540648,19.6314446337317,10.619611067197,10.4395673546642,8.76738315197778,15.0884063804718,7.38254732201932,14.4494519533646,14.4719844174204,13.8142817201452,15.6858846489277,15.1697643809192,13.7044191147498,14.4389760547462,21.7881347682424,14.4048875225048,8.79639049722731,11.574199891706,18.6207245324387,18.9070946658195,19.087686389846,10.3518082698964,5.63212099352905,8.04961869282517,9.48272111636336,9.39851641766436,12.9171541356724,10.7960135621399,7.5204576721976,5.41664969158702,3.49777003955821,30.7806001337446,2.39219233116994,8.46186158649212,5.55583582109135,3.57900068308913,2.1871076435364,4.80434163733698,9.17883521966819,7.55737842547753,7.04819866402561,9.54670618015114,12.6534397432454,17.0788352386553,14.5807210109432,11.4998562807958,11.7915784422936,9.97996163247673,11.6541372572724,11.2555055053133,3.11075935900303,6.83473244395618,22.5477175473676,12.7089064137382,11.0857188606255,14.1949367491155,11.6243841129958,14.3612706667161,15.256441023948,11.7183946359555,13.6317147753424,24.8831644450786,24.1945205256607,5.68820017130721,8.5144590421869,7.08705604437308,8.31493267057888,8.77230808770659,7.3512101269068,7.69250876927801,6.79371825003055,7.16861794631848,7.84930108546498,5.54544018252623,7.50425681696094,6.15755786498109,9.93453668543336,7.48210265930198,5.54964883435162,5.9211145362254,6.04384618910682,10.4322380777383,10.8855835761686,13.9195234443121,9.21784030039983,10.0314420807073,12.9892923801925,17.9526842237799,14.8952833494243,24.0594455281163,22.6077231524312,15.8632718451837,15.5255175053315,20.2644541450899,18.5788387683524,16.0505696643064,10.3787347584177,26.7346665178691,17.5855613926758,13.1277627216879,9.64220548088719,10.6629234901008,15.1127774905098,13.598313777767,11.2321723357135,12.8875577999537,17.4900716924265,13.7697229211836,14.7017166727715,16.1983635584319,15.0480928663707,15.2413981210584,13.7902347874378,16.5901929598786,11.9504911232959,14.2782952530365,7.88599280486455,14.0205886865877,10.4911923576821,13.5172167468066,13.3635320189769,15.3998586362851,15.3659497213129,10.7858581689516,14.2594319538155,12.906272248128,13.64302708428,12.7070782264477,17.5969348562966,13.3245683419931,10.8027702149439,15.9878769880285,10.7608539884888,12.4625211348013,10.9034349279241,7.27951683094401,12.9845987947436
|short_description=p1@Tbc1d19
|short_description=p1@Tbc1d19
}}
}}

Latest revision as of 02:23, 26 September 2015

Short description:p1@Tbc1d19
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tbc1d19_5end
Coexpression cluster:MCL_coexpression_mm9:797
Association with transcript: 5bp_to_ENSMUST00000037337, NM_144517, uc008xln.2, uc008xlo.2_5end
EntrezGene:Tbc1d19
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Tbc1d19

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.18
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.06
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D817.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.26
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B321.29
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.13
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E117.19
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C314.97
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.47
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E89.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.03
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D723.04
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E520.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I627.66
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D626.22
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.94
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.98
Mouse Schwann, donor1.CNhs12507.11728-123D914.77
Mouse Schwann, donor2.CNhs12573.11746-123F917.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G326.67
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I720.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.48
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.01
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I838.22
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.94
accessory axillary lymph node, adult.CNhs10475.1063-29H98.80
adrenal gland, adult.CNhs10508.49-24D714.99
adrenal gland, embryo E14.CNhs11038.406-44C58.85
adrenal gland, embryo E16.CNhs11004.1254-43D68.22
adrenal gland, embryo E17.CNhs11043.1263-45I19.46
adrenal gland, embryo E18.CNhs11026.1262-18F511.45
adrenal gland, neonate N00.CNhs11191.1311-23C112.23
adrenal gland, neonate N25.CNhs11223.1377-27I312.19
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H110.12
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F511.49
bone (os femoris), neonate N16.CNhs11225.1525-43A68.83
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B215.81
cerebellum, neonate N30.CNhs11135.1395-42I221.78
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.83
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.62
corpora quadrigemina, adult.CNhs10501.16-22A420.52
corpus striatum, adult.CNhs10487.19-21D821.96
corpus striatum, neonate N00.CNhs11226.630-43F112.82
cortex, adult.CNhs10473.12-14D521.55
cortex, neonate N30.CNhs11107.1392-42F222.76
diencephalon, adult.CNhs10482.20-12F221.40
diencephalon, neonate N30.CNhs11201.1388-42B222.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.72
epididymis, adult.CNhs10490.58-23B212.89
eyeball, adult.CNhs10484.31-12G46.73
eyeball, embryo E12.CNhs11016.345-16C611.58
eyeball, embryo E14.CNhs10521.399-16E216.55
eyeball, embryo E15.CNhs10593.426-16C916.57
eyeball, embryo E17.CNhs11023.1261-18D419.44
eyeball, neonate N00.CNhs11207.633-15C618.78
eyeball, neonate N01.CNhs11140.1532-43E719.73
eyeball, neonate N02.CNhs11205.1551-44G816.87
eyeball, neonate N16.CNhs11188.777-19A212.68
forelimb, embryo E11.CNhs10596.335-25E29.27
forelimb, embryo E12.CNhs10600.359-14H213.62
forelimb, embryo E13.CNhs10589.384-1E219.00
forelimb, embryo E14.CNhs10577.413-26A813.37
forelimb, embryo E15.CNhs11007.437-20E715.57
forelimb, embryo E17.CNhs10598.1517-43C413.58
forelimb, embryo E18.CNhs11008.1520-43B510.70
gonad, embryo E13.CNhs11044.1564-45I613.73
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.63
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.40
heart, embryo E11.CNhs10586.331-24E910.36
heart, embryo E12.CNhs11015.353-12F515.01
heart, embryo E13.CNhs11013.376-3I99.72
heart, embryo E14.CNhs10597.403-26D413.26
heart, embryo E15.CNhs11017.431-16C813.38
heart, embryo E16.CNhs11021.457-17C612.19
heart, embryo E17.CNhs11025.479-18E516.28
heart, embryo E18.CNhs11030.1283-20G312.07
heart, neonate N00.CNhs11213.639-21E310.39
heart, neonate N03.CNhs11221.1349-25I213.82
heart, neonate N10.CNhs11118.749-24G117.40
heart, neonate N16.CNhs11209.782-15G112.16
heart, neonate N20.CNhs11127.821-26I610.53
heart, neonate N25.CNhs11196.1351-25D310.10
heart, neonate N30.CNhs11202.1390-42D211.41
hippocampus, adult.CNhs10478.13-16E822.29
hippocampus, neonate N00.CNhs11228.627-43G120.58
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I513.44
intestine, embryo E13.CNhs11010.381-16D513.93
intestine, embryo E15.CNhs10602.976-16D812.76
intestine, embryo E16.CNhs10585.463-22H47.66
intestine, embryo E17.CNhs10582.482-18D36.00
intestine, embryo E18.CNhs10526.1289-20F78.75
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B87.29
intestine, neonate N07.CNhs11095.720-20F26.17
intestine, neonate N10.CNhs11098.755-23A57.02
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I99.48
kidney, embryo E15.CNhs10997.434-16F814.51
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I214.87
kidney, embryo E18.CNhs11001.1288-20C716.10
kidney, neonate N00.CNhs11214.646-21G714.94
kidney, neonate N10.CNhs11206.758-6D522.01
kidney, neonate N20.CNhs11113.832-19I119.63
kidney, neonate N25.CNhs11122.1353-25F322.29
kidney, neonate N30.CNhs11203.1385-42H120.11
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F87.34
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D74.06
liver, embryo E16.CNhs10523.462-17F53.86
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H14.13
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B117.92
lung, embryo E12.CNhs10522.354-16G215.73
lung, embryo E14.CNhs10604.404-26F820.70
lung, embryo E15.CNhs11020.432-17C516.47
lung, embryo E16.CNhs10998.458-17B615.49
lung, embryo E17.CNhs10605.480-44A616.92
lung, embryo E18.CNhs10583.1287-20I617.38
lung, neonate N00.CNhs11224.640-42C612.10
lung, neonate N06.CNhs11212.683-20E517.50
lung, neonate N07.CNhs11111.715-19A316.61
lung, neonate N10.CNhs11219.750-23E618.34
lung, neonate N20.CNhs11109.822-18A413.76
lung, neonate N25.CNhs11119.1359-25C716.75
lung, neonate N30.CNhs11133.1394-42H215.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.07
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H26.90
medulla oblongata, adult.CNhs10477.17-12C226.17
medulla oblongata, neonate N30.CNhs11200.1396-42A325.90
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.69
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.69
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.51
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.30
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.90
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.92
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.30
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.98
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.23
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.46
olfactory brain, adult.CNhs10489.18-22I923.46
ovary, adult.CNhs10507.91-2I715.90
ovary, embryo E18.CNhs11040.505-44H712.64
ovary, neonate N00.CNhs11217.1299-22I416.61
oviduct, adult pregnant day01.CNhs10500.988-6G619.63
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F410.44
pancreas, embryo E15.CNhs11042.1556-45F28.77
pancreas, embryo E16.CNhs11003.460-26E515.09
pancreas, embryo E17.CNhs10599.1558-45G37.38
pancreas, embryo E18.CNhs10580.1535-43I714.45
pancreas, neonate N00.CNhs11105.645-26G914.47
pancreas, neonate N01.CNhs11138.1531-43D713.81
pancreas, neonate N02.CNhs11139.1539-43D815.69
pancreas, neonate N16.CNhs11136.787-43B615.17
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G821.79
pituitary gland, embryo E12.CNhs11018.346-16E614.40
pituitary gland, embryo E13.CNhs11009.370-44C78.80
pituitary gland, embryo E14.CNhs11037.398-44A511.57
pituitary gland, embryo E15.CNhs10592.427-16B918.62
pituitary gland, embryo E16.CNhs11036.449-43F618.91
pituitary gland, embryo E17.CNhs11039.1265-44F519.09
pituitary gland, neonate N00.CNhs11190.1308-22E910.35
placenta, adult pregnant day10.CNhs10472.539-13I75.63
placenta, adult pregnant day17.CNhs10464.577-18G38.05
prostate, adult.CNhs10470.859-1F89.48
skin, adult.CNhs10492.30-1C39.40
skin, neonate N00.CNhs11124.650-25G412.92
skin, neonate N03.CNhs11215.662-22H310.80
skin, neonate N06.CNhs11097.693-20I57.52
skin, neonate N10.CNhs11108.762-6C45.42
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C930.78
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C18.46
spleen, embryo E18.CNhs11011.1271-21F25.56
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.05
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E312.65
stomach, embryo E15.CNhs10603.1252-16G817.08
stomach, embryo E16.CNhs11022.459-17D414.58
stomach, embryo E17.CNhs11006.1035-18D511.50
stomach, embryo E18.CNhs10999.1286-20C611.79
stomach, neonate N03.CNhs11193.1340-24B89.98
stomach, neonate N07.CNhs11210.718-18A911.65
stomach, neonate N25.CNhs11104.1355-25E411.26
stomach, neonate N30.CNhs11134.1386-42I13.11
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G522.55
testis, embryo E13.CNhs11031.389-23F512.71
testis, embryo E15.CNhs11034.443-27C511.09
testis, embryo E16.CNhs11033.470-26G514.19
testis, embryo E17.CNhs11029.486-18I511.62
testis, embryo E18.CNhs11027.503-18G514.36
testis, neonate N00.CNhs11189.1300-22B715.26
testis, neonate N07.CNhs11222.726-26I411.72
testis, neonate N10.CNhs11204.763-44D913.63
testis, neonate N20.CNhs11110.839-18H324.88
testis, neonate N30.CNhs11130.1391-42E224.19
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I48.51
thymus, embryo E15.CNhs11005.430-45I27.09
thymus, embryo E16.CNhs11002.456-26C58.31
thymus, embryo E17.CNhs10581.478-18C18.77
thymus, embryo E18.CNhs10595.1273-19G47.35
thymus, neonate N02.CNhs11181.1541-43F87.69
thymus, neonate N03.CNhs11137.2104-43C76.79
thymus, neonate N06.CNhs11197.681-26C47.17
thymus, neonate N07.CNhs11211.713-19D37.85
thymus, neonate N10.CNhs11194.748-24E45.55
thymus, neonate N20.CNhs11186.820-7A27.50
thymus, neonate N25.CNhs11125.1362-25G76.16
thymus, neonate N30.CNhs11132.1393-42G29.93
tongue, adult.CNhs10499.32-1B47.48
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.92
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.04
urinary bladder, adult.CNhs10481.879-12E410.43
uterus, adult pregnant day19.CNhs10497.590-15F510.89
uterus, adult.CNhs10509.92-27E513.92
vagina, adult.CNhs10502.89-27D59.22
vesicular gland, adult.CNhs10491.51-27F810.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.95
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.90
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A818.58
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.05
whole body, embryo E11.CNhs11014.324-5I810.38
whole body, embryo E12.CNhs10587.857-27C926.73
whole body, embryo E13.CNhs10512.372-23H217.59
whole body, embryo E14.5.CNhs10578.420-27D213.13
whole body, embryo E14.CNhs10519.395-14B19.64
whole body, embryo E16.CNhs10514.453-14F210.66
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.23
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.49
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.70
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G515.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.49
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.52
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.36
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.71
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G517.60
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.32
whole body, embryo E17.5.CNhs10513.490-9F910.80
whole body, embryo E17.CNhs10517.475-3I515.99
whole body, embryo E18.CNhs10516.493-3B310.76
whole body, neonate N00.CNhs10525.657-19C212.46
whole body, neonate N01.CNhs10576.659-23C610.90
whole body, neonate N06.CNhs10515.692-21D17.28
whole body, neonate N10.CNhs10518.761-6B412.98





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell1.57e-0739
electrically active cell1.57e-0739

Uber anatomy
Ontology termp-valuen
neurectoderm7.46e-1664
neural plate7.46e-1664
presumptive neural plate7.46e-1664
structure with developmental contribution from neural crest3.95e-1592
nervous system4.76e-1575
regional part of nervous system1.11e-1454
central nervous system1.74e-1473
ecto-epithelium4.22e-1473
neural tube6.65e-1452
neural rod6.65e-1452
future spinal cord6.65e-1452
neural keel6.65e-1452
ectoderm-derived structure1.28e-1395
ectoderm1.28e-1395
presumptive ectoderm1.28e-1395
brain1.47e-1147
future brain1.47e-1147
regional part of brain5.24e-1146
pre-chordal neural plate9.82e-1149
anterior neural tube2.56e-0940
gray matter4.74e-0934
regional part of forebrain7.12e-0939
forebrain7.12e-0939
future forebrain7.12e-0939
tube7.49e-09114
anatomical conduit1.16e-08122
brain grey matter6.14e-0729
regional part of telencephalon6.14e-0729
telencephalon6.14e-0729
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