FFCP PHASE1:Hg19::chr14:59830427..59830451,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:59830427..59830451,+ | |||
|coexpression_cluster_id=C2304 | |||
|description=CAGE_peak_at_chr14:59830427..59830451,+ | |description=CAGE_peak_at_chr14:59830427..59830451,+ | ||
|id=chr14:59830427..59830451,+ | |id=chr14:59830427..59830451,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.18e-19!254;CL:0000076!5.81e-19!62;CL:0000220!4.65e-15!246;CL:0002321!5.57e-15!248;CL:0000222!5.78e-10!119;CL:0002494!1.15e-09!16;CL:0000077!1.20e-07!19;CL:0000359!2.31e-07!32;CL:0002076!6.98e-07!43 | |ontology_enrichment_celltype=CL:0000066!1.18e-19!254;CL:0000076!5.81e-19!62;CL:0000220!4.65e-15!246;CL:0002321!5.57e-15!248;CL:0000222!5.78e-10!119;CL:0002494!1.15e-09!16;CL:0000077!1.20e-07!19;CL:0000359!2.31e-07!32;CL:0002076!6.98e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002494;9.58e-12;16!CL:0000076;3.58e-10;63!CL:0000077;6.30e-09;19!CL:0000359;9.04e-08;32!CL:0002076;9.94e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,3.83e-21,63;CL:0000066,2.11e-20,253;CL:0002321,3.33e-14,250;CL:0002494,9.69e-12,16;CL:0002076,5.14e-10,42;CL:0000077,5.53e-09,19;CL:0000223,1.35e-08,58;CL:0000359,3.45e-08,32;CL:0000222,1.08e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.58e-07!14;DOID:1749!2.16e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.94e-10;14!DOID:2394;1.82e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.37e-10,14;DOID:2394,1.87e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.20e-20!84;UBERON:0003914!4.27e-14!118;UBERON:0001981!1.49e-13!60;UBERON:0007500!1.49e-13!60;UBERON:0004537!1.49e-13!60;UBERON:0006965!1.49e-13!60;UBERON:0000055!3.24e-12!69;UBERON:0001637!3.60e-12!42;UBERON:0003509!3.60e-12!42;UBERON:0004572!3.60e-12!42;UBERON:0001048!4.55e-12!168;UBERON:0001009!9.98e-12!113;UBERON:0002049!2.12e-11!79;UBERON:0007798!2.12e-11!79;UBERON:0004535!3.10e-11!110;UBERON:0007100!5.58e-11!27;UBERON:0004573!1.13e-10!33;UBERON:0004571!1.13e-10!33;UBERON:0000948!1.21e-10!24;UBERON:0005498!1.21e-10!24;UBERON:0004140!1.21e-10!24;UBERON:0009881!1.21e-10!24;UBERON:0004141!1.21e-10!24;UBERON:0003084!1.21e-10!24;UBERON:0007005!1.21e-10!24;UBERON:0004139!1.21e-10!24;UBERON:0004291!1.21e-10!24;UBERON:0000490!2.73e-09!138;UBERON:0000483!7.50e-09!309;UBERON:0000119!9.11e-09!312;UBERON:0000477!1.32e-08!286;UBERON:0004111!1.78e-07!241;UBERON:0000947!1.91e-07!21;UBERON:0010191!1.91e-07!21;UBERON:0004458!2.31e-07!49;UBERON:0000486!2.46e-07!82;UBERON:0002323!4.12e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;9.73e-12;22!UBERON:0007100;1.93e-11;25!UBERON:0004573;1.79e-10;33!UBERON:0004571;1.79e-10;33!UBERON:0001637;2.22e-10;42!UBERON:0003509;2.22e-10;42!UBERON:0004572;2.22e-10;42!UBERON:0007500;1.13e-08;56!UBERON:0001981;1.13e-08;56!UBERON:0004537;1.13e-08;56!UBERON:0000947;1.08e-07;21!UBERON:0010191;1.08e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,7.80e-21,83;UBERON:0003914,9.22e-15,117;UBERON:0001637,2.39e-13,42;UBERON:0003509,2.39e-13,42;UBERON:0004572,2.39e-13,42;UBERON:0007500,6.51e-13,59;UBERON:0001981,6.51e-13,59;UBERON:0004537,6.51e-13,59;UBERON:0006965,6.51e-13,59;UBERON:0000948,1.32e-12,24;UBERON:0005498,1.32e-12,24;UBERON:0004140,1.32e-12,24;UBERON:0009881,1.32e-12,24;UBERON:0004141,1.32e-12,24;UBERON:0003084,1.32e-12,24;UBERON:0007005,1.32e-12,24;UBERON:0004139,1.32e-12,24;UBERON:0004291,1.32e-12,24;UBERON:0007100,2.88e-12,27;UBERON:0001048,9.19e-12,160;UBERON:0004573,1.13e-11,33;UBERON:0004571,1.13e-11,33;UBERON:0001009,4.88e-11,112;UBERON:0004535,7.74e-11,109;UBERON:0000055,1.54e-09,68;UBERON:0002049,1.90e-08,78;UBERON:0007798,1.90e-08,78;UBERON:0000947,9.07e-08,21;UBERON:0010191,9.07e-08,21;UBERON:0000490,3.52e-07,148 | |||
|phase1_expression=1.63510541343501,1.07050261945492,2.53717927372748,1.0007329835313,1.78784437770915,6.97870819280295,0,0,0.261185628199839,2.94880723801811,0,1.96597234917155,0.527533956456907,0,0,4.70627602516243,7.8350288643117,5.84248072309899,5.36726078669558,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,17.4690032650996,0,2.9580320813343,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,16.7675214925909,18.9236591528425,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,1.99556457716308,0.614843499851882,0.458426764241994,2.91436230634034,0.741568885568859,0,0,0,0,0,0,3.57772333260069,2.58070378531837,5.20710752411391,11.8714667804042,0.838998872419812,2.20094433552054,2.92592953151535,0.775250277507987,0,0.33472061276467,2.81980521976403,6.0821768457481,0.488124115096339,5.8826092855339,0,0.803697554556718,2.02076435363553,0.450445921933289,1.53316637465883,1.89853131913626,3.84723662253855,0,0,3.05265836499774,0.993943903390637,5.06522046658319,1.72131935057184,2.29469296599051,3.90135220418193,15.1382952038423,8.5399196583764,18.9934012281213,6.53543174339509,10.1033004052266,10.4615617992614,0.151357427644931,1.72852777344,0,0.624320153660641,1.1409436430889,0.597794722207204,0.352303495931295,0,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,7.59995627172141,0,0.213557388818567,1.48352330811693,0.300091096084402,2.06105058476878,0.257640540045629,0.18611685633159,0,0.0974370051611986,0.757301322732344,0.184099797284599,6.62748832957129,0,0,0.169560592310488,23.5778240859222,15.2737827530867,20.9367354633973,0.121973706129595,0.132529768321485,0,0,0,0,0,0,1.38134921352481,0,0,1.30137480043828,0.674338760312407,2.41011029883482,2.64705534557745,1.08939722046203,1.66089433377768,2.56179485504312,2.35465758150415,3.07797725557112,0,0,0,0,1.26755034821831,1.96565443335525,3.54473944008842,0,0,2.91665277507493,2.30475599358114,3.37205259772859,50.3650151782271,16.6659201285353,0,0,0,0.231860809950154,9.27528684462991,0.288732895522148,0.925971025153221,0.761016608938393,0,0.858486162094873,0,0,0,12.185398418281,23.5174979478403,18.714312835995,13.1651028373187,36.0386083757313,4.21720947081732,0,0,0,0,0,0.190493682876507,0,0,0,0,0.901029173531752,0,0.112131084345361,0,0.95339771567235,63.9894993001,0,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0,0.285955987316295,0,0.823240336780769,0.325736184293735,0.355391948742546,2.37585561880029,6.02878754119172,20.9168030064071,14.09619175667,0,0,0,0,0,0,2.31650090668127,0.410952645100767,0.358121926479791,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,2.49565033836969,1.78428988797162,1.26161932027148,0.585707074963566,1.20378439891088,0,2.0694614258501,0,0.368738337083406,0,0,0,0,0,0,0.909382714338778,0,0,6.4508030032882,1.2276957863045,1.40330047216537,2.56278298511402,5.11707249066703,1.28683136914886,2.96836132889982,2.15893571323718,8.34540108971697,1.31403449622095,13.5006151587741,0.697262270759755,0,23.6597634957876,2.20994373446151,1.37777337797528,0,0.131124414959424,0.451199612907412,0.15403067420883,0,0,0.316654886678627,0,0.510281115829547,0.431831832204279,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0.328014645699706,0.976135183992909,1.54561517471583,0,0,5.74265537996172,8.45078319847478,4.82051789532479,0,0.154048617114644,0.307007349452259,0.413509717453592,0.429680979473094,0.145016693914229,0.0852266274161009,0.534192213880424,11.7352289906294,16.1439656586689,7.52915003718046,2.2254711788221,4.18360994367557,0.62962469366128,0.6970372701606,1.54016790088044,5.32306030317022,4.34966496037536,1.29726953372744,5.43874569619567,0,0,0.38126038784765,0,0,0.318203247925937,1.56989728039846,0,0,0.942499218765491,3.43710218674637,9.5106192703805,13.4802705996474,0,1.21856744815642,1.05650146756755,0.136499911407986,0.848432591722276,1.13008116620243,1.65409603063837,1.99031692572366,2.63070531152258,0,0,1.01455188481352,0,6.76069446077379,1.00387946542836,2.84922218938051,2.1400263088875,0,1.47775344708365,0.987884678879706,0,0,14.0484284579248,4.02181365321472,1.08890984861323,1.50630081242847,8.17960208075337,16.8471475667626,3.10401107475673,19.9859358180055,0,0,0,0,0,0,0,0,0,0,12.2520107990516,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,1.4098700508785,0,0.293016358543788,0,0,0,0.95497793895076,0.593929361665277,3.37876772309155,0,0.140669416410513,19.4790233790085,0.16480387422676,0,0.796991953004279,0.552567831062295,0,0.102268682502155,0,0,9.52604522161664,0.537063524026827,0,0.789147245095469,0,1.11136990144637,0.969332746095218,0,0,0.7812832832557,0,1.44999915086959,3.86897724170699,1.5255219017566,0,0.344743373241465,0,0,0,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| ||
|short_description=p@chr14:59830427..59830451,+ | |short_description=p@chr14:59830427..59830451,+ | ||
}} | }} |
Latest revision as of 21:28, 24 July 2015
Short description: | p@chr14:59830427..59830451, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:59830427..59830451, + |
Coexpression cluster: | C2304_malignant_mesothelioma_Keratinocyte_Mesenchymal_oral_epidermoid_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 3.83e-21 | 63 |
epithelial cell | 2.11e-20 | 253 |
embryonic cell | 3.33e-14 | 250 |
cardiocyte | 9.69e-12 | 16 |
endo-epithelial cell | 5.14e-10 | 42 |
mesothelial cell | 5.53e-09 | 19 |
endodermal cell | 1.35e-08 | 58 |
vascular associated smooth muscle cell | 3.45e-08 | 32 |
mesodermal cell | 1.08e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 7.80e-21 | 83 |
epithelial tube | 9.22e-15 | 117 |
artery | 2.39e-13 | 42 |
arterial blood vessel | 2.39e-13 | 42 |
arterial system | 2.39e-13 | 42 |
epithelial tube open at both ends | 6.51e-13 | 59 |
blood vessel | 6.51e-13 | 59 |
blood vasculature | 6.51e-13 | 59 |
vascular cord | 6.51e-13 | 59 |
heart | 1.32e-12 | 24 |
primitive heart tube | 1.32e-12 | 24 |
primary heart field | 1.32e-12 | 24 |
anterior lateral plate mesoderm | 1.32e-12 | 24 |
heart tube | 1.32e-12 | 24 |
heart primordium | 1.32e-12 | 24 |
cardiac mesoderm | 1.32e-12 | 24 |
cardiogenic plate | 1.32e-12 | 24 |
heart rudiment | 1.32e-12 | 24 |
primary circulatory organ | 2.88e-12 | 27 |
primordium | 9.19e-12 | 160 |
systemic artery | 1.13e-11 | 33 |
systemic arterial system | 1.13e-11 | 33 |
circulatory system | 4.88e-11 | 112 |
cardiovascular system | 7.74e-11 | 109 |
vessel | 1.54e-09 | 68 |
vasculature | 1.90e-08 | 78 |
vascular system | 1.90e-08 | 78 |
aorta | 9.07e-08 | 21 |
aortic system | 9.07e-08 | 21 |
unilaminar epithelium | 3.52e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.37e-10 | 14 |
ovarian cancer | 1.87e-08 | 14 |