FFCP PHASE1:Hg19::chr14:89319304..89319352,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:89319304..89319352,+ | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_at_chr14:89319304..89319352,+ | |description=CAGE_peak_at_chr14:89319304..89319352,+ | ||
|id=chr14:89319304..89319352,+ | |id=chr14:89319304..89319352,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.15e-51;5!CL:0002591;2.73e-29;1!CL:0002321;7.82e-18;15!CL:0002567;1.04e-10;3!CL:0002537;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.37e-29,1;CL:0000333,4.18e-11,41;CL:0002567,8.99e-11,3;CL:0000133,5.83e-08,59;CL:0002537,6.77e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000221;2.45e-07;72 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;3.16e-43;6!DOID:171;2.55e-26;10!DOID:3095;2.09e-12;22!DOID:2994;2.09e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,3.16e-43,6;DOID:171,2.55e-26,10;DOID:3095,2.09e-12,22;DOID:2994,2.09e-12,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.15e-51;5!UBERON:0002410;1.15e-51;5!UBERON:0000010;3.84e-29;8!UBERON:0000078;2.21e-15;2!UBERON:0002012;2.21e-15;2!UBERON:0008886;2.21e-15;2!UBERON:0002114;1.04e-10;2!UBERON:0002108;6.21e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.15e-51,5;UBERON:0002410,1.15e-51,5;UBERON:0000010,3.84e-29,8;UBERON:0000078,2.05e-15,2;UBERON:0007497,2.05e-15,2;UBERON:0003643,2.05e-15,2;UBERON:0003504,2.05e-15,2;UBERON:0003469,2.05e-15,2;UBERON:0003496,2.05e-15,2;UBERON:0002012,2.05e-15,2;UBERON:0008886,2.05e-15,2;UBERON:0007303,2.05e-15,2;UBERON:0002061,2.05e-15,2;UBERON:0005432,2.05e-15,2;UBERON:0004363,2.05e-15,2;UBERON:0004145,9.90e-11,3;UBERON:0002114,1.09e-10,2;UBERON:0003498,6.04e-07,5;UBERON:0005985,6.04e-07,5;UBERON:0002108,6.39e-07,4 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276149695926898,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0.40101294060657,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0.208843899010911,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0.146552233678082,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0,0,0.889811221596536,0.228840068396924,0,0,0,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0.521745061811734,0,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30209868346573,3.01909471910709,0,5.4604819096007,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0.157115589916002,0.280272163313789,0,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0.227336094654718,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276149695926898,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0.40101294060657,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0.208843899010911,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0.146552233678082,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0,0,0.889811221596536,0.228840068396924,0,0,0,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0.521745061811734,0,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30209868346573,3.01909471910709,0,5.4604819096007,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0.157115589916002,0.280272163313789,0,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0.227336094654718,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr14:89319304..89319352,+ | |short_description=p@chr14:89319304..89319352,+ | ||
}} | }} |
Latest revision as of 23:25, 24 July 2015
Short description: | p@chr14:89319304..89319352, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:89319304..89319352, + |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.37e-29 | 1 |
migratory neural crest cell | 4.18e-11 | 41 |
light melanocyte | 8.99e-11 | 3 |
neurectodermal cell | 5.83e-08 | 59 |
amnion mesenchymal stem cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.15e-51 | 5 |
autonomic nervous system | 1.15e-51 | 5 |
peripheral nervous system | 3.84e-29 | 8 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.05e-15 | 2 |
developing epithelial placode | 2.05e-15 | 2 |
respiratory system arterial blood vessel | 2.05e-15 | 2 |
respiratory system blood vessel | 2.05e-15 | 2 |
respiratory system artery | 2.05e-15 | 2 |
head blood vessel | 2.05e-15 | 2 |
pulmonary artery | 2.05e-15 | 2 |
pulmonary vascular system | 2.05e-15 | 2 |
pharyngeal vasculature | 2.05e-15 | 2 |
truncus arteriosus | 2.05e-15 | 2 |
aortic sac | 2.05e-15 | 2 |
pharyngeal arch artery | 2.05e-15 | 2 |
outflow tract | 9.90e-11 | 3 |
duodenum | 1.09e-10 | 2 |
heart blood vessel | 6.04e-07 | 5 |
coronary vessel | 6.04e-07 | 5 |
small intestine | 6.39e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.16e-43 | 6 |
neuroectodermal tumor | 2.55e-26 | 10 |
germ cell and embryonal cancer | 2.09e-12 | 22 |
germ cell cancer | 2.09e-12 | 22 |