FFCP PHASE1:Mm9::chr6:48363021..48363033,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=77827 | |EntrezGene=77827 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=61 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-301bp_to_uc009bud.2_5end | |association_with_transcript=-301bp_to_uc009bud.2_5end | ||
|cluster_id=chr6:48363021..48363033,+ | |||
|description=CAGE_peak_9_at_Krba1_5end | |description=CAGE_peak_9_at_Krba1_5end | ||
|id=chr6:48363021..48363033,+ | |id=chr6:48363021..48363033,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.18e-14!43;UBERON:0005409!4.42e-10!59;UBERON:0000331!3.76e-08!3;UBERON:0002116!3.76e-08!3;UBERON:0001204!3.76e-08!3;UBERON:0001168!3.76e-08!3 | |ontology_enrichment_uberon=UBERON:0000160!9.18e-14!43;UBERON:0005409!4.42e-10!59;UBERON:0000331!3.76e-08!3;UBERON:0002116!3.76e-08!3;UBERON:0001204!3.76e-08!3;UBERON:0001168!3.76e-08!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.10e-28,31;UBERON:0005409,3.14e-18,47;UBERON:0002108,1.71e-09,4;UBERON:0004921,3.40e-07,114;UBERON:0001007,4.64e-07,116;UBERON:0001555,4.64e-07,116;UBERON:0007026,4.64e-07,116;UBERON:0004119,6.28e-07,118;UBERON:0000925,6.28e-07,118;UBERON:0006595,6.28e-07,118 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52018735565099,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,2.44615848229357,5.70676878337677,5.21981967698963,2.63518327558417,5.02670417600539,6.96347652144028,7.40863531052657,4.49409704327111,0.864552199498777,0,0,0,0,0,0,0,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0.290692833264657,0.188218760830661,0,0.182927972872773,0.526139422875686,0,0,0,0.0985044823755635,0,0,0.385813221962283,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52018735565099,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,2.44615848229357,5.70676878337677,5.21981967698963,2.63518327558417,5.02670417600539,6.96347652144028,7.40863531052657,4.49409704327111,0.864552199498777,0,0,0,0,0,0,0,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0.290692833264657,0.188218760830661,0,0.182927972872773,0.526139422875686,0,0,0,0.0985044823755635,0,0,0.385813221962283,0,0.233931608445408,0,0,0,0 | ||
|short_description=p9@Krba1 | |short_description=p9@Krba1 | ||
}} | }} |
Latest revision as of 07:15, 27 September 2015
Short description: | p9@Krba1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Krba1_5end |
Coexpression cluster: | MCL_coexpression_mm9:61 |
Association with transcript: | -301bp_to_uc009bud.2_5end |
EntrezGene: | Krba1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 8.10e-28 | 31 |
gastrointestinal system | 3.14e-18 | 47 |
small intestine | 1.71e-09 | 4 |
subdivision of digestive tract | 3.40e-07 | 114 |
digestive system | 4.64e-07 | 116 |
digestive tract | 4.64e-07 | 116 |
primitive gut | 4.64e-07 | 116 |
endoderm-derived structure | 6.28e-07 | 118 |
endoderm | 6.28e-07 | 118 |
presumptive endoderm | 6.28e-07 | 118 |