FFCP PHASE1:Mm9::chr6:72047817..72047828,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20454 | |EntrezGene=20454 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=O88829 | |UniProt=O88829 | ||
|association_with_transcript=210bp_to_ENSMUST00000114112,NM_011375,uc009chz.1_5end | |association_with_transcript=210bp_to_ENSMUST00000114112,NM_011375,uc009chz.1_5end | ||
|cluster_id=chr6:72047817..72047828,+ | |||
|description=CAGE_peak_6_at_St3gal5_5end | |description=CAGE_peak_6_at_St3gal5_5end | ||
|id=chr6:72047817..72047828,+ | |id=chr6:72047817..72047828,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!1.03e-08!10;UBERON:0000411!1.03e-08!10;UBERON:0001950!1.03e-08!10;UBERON:0005172!6.61e-08!49;UBERON:0005173!6.61e-08!49;UBERON:0002417!6.61e-08!49;UBERON:0000916!6.61e-08!49;UBERON:0002619!4.57e-07!17;UBERON:0002107!8.72e-07!22;UBERON:0007499!8.72e-07!22;UBERON:0006925!8.72e-07!22;UBERON:0009497!8.72e-07!22;UBERON:0000015!8.72e-07!22;UBERON:0002423!8.72e-07!22;UBERON:0006235!8.72e-07!22;UBERON:0008835!8.72e-07!22;UBERON:0003894!8.72e-07!22;UBERON:0004161!8.72e-07!22;UBERON:0008836!8.72e-07!22 | |ontology_enrichment_uberon=UBERON:0002021!1.03e-08!10;UBERON:0000411!1.03e-08!10;UBERON:0001950!1.03e-08!10;UBERON:0005172!6.61e-08!49;UBERON:0005173!6.61e-08!49;UBERON:0002417!6.61e-08!49;UBERON:0000916!6.61e-08!49;UBERON:0002619!4.57e-07!17;UBERON:0002107!8.72e-07!22;UBERON:0007499!8.72e-07!22;UBERON:0006925!8.72e-07!22;UBERON:0009497!8.72e-07!22;UBERON:0000015!8.72e-07!22;UBERON:0002423!8.72e-07!22;UBERON:0006235!8.72e-07!22;UBERON:0008835!8.72e-07!22;UBERON:0003894!8.72e-07!22;UBERON:0004161!8.72e-07!22;UBERON:0008836!8.72e-07!22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.08e-24,10;UBERON:0000411,1.08e-24,10;UBERON:0001950,1.08e-24,10;UBERON:0002619,6.95e-19,17;UBERON:0000956,1.59e-17,21;UBERON:0001869,1.59e-17,21;UBERON:0000203,1.59e-17,21;UBERON:0003528,7.91e-12,29;UBERON:0002791,7.91e-12,29;UBERON:0001893,7.91e-12,29;UBERON:0002020,1.22e-09,34;UBERON:0002616,1.22e-08,46;UBERON:0000955,2.20e-08,47;UBERON:0006238,2.20e-08,47;UBERON:0002780,5.05e-08,39;UBERON:0001890,5.05e-08,39;UBERON:0006240,5.05e-08,39;UBERON:0004111,6.28e-08,122;UBERON:0003080,9.49e-08,40;UBERON:0010314,2.45e-07,92;UBERON:0001049,3.00e-07,52;UBERON:0005068,3.00e-07,52;UBERON:0006241,3.00e-07,52;UBERON:0007135,3.00e-07,52;UBERON:0000073,7.41e-07,54 | |||
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|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,2.09868563438444,0,0,0,0.425216450755349,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0.251793635951155,0.101376931219515,0.183546752161682,0,0.218025156380447,0.878744730937887,1.1665793944457,0,0,0,0,0,0.257259436035947,0,1.03134418455488,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0,0,0,0.135005938331691,0,0.856952953211411,0,0,0,0,0,0.638436690425939,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0,0.294628585473668,0,0.186399445825301,0,0.0755715601067855,3.18850937571846,0,0.679971333707751,0,0,0.896053774194671,0.421333260395256,0,0,0.35333957451034,1.26759077799012,1.28326477414318,0,0,0,0,0,0.34255163915718,0,2.22663208597237,0.520455980298408,0.608930956624282,1.38369298353635,0.150722640552623,1.17588707135705,1.75933227861546,0.247194967734374,0,0,0.485300549842228,0.220841518460394,0.969750506270444,0,1.75668478206928,1.25668024088073,0,0,0,0,0.149790639404823,0.457500602818626,0,5.73620256634512,4.85859368927628,0.41557608911912,0.973447578406546,0.203678727700633,0.373220911830279,0,0,0,0.459804208866946,0.540186389416048,0.30140963567143,0.272145996605311,0.2562274405697,0.187403449119458,0,0,0,0,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0.414251545071004,0.938104239924385,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0.536825675041487,1.05144974282064,0.617427674275707,0,0,0.213288250535234,0.696710015581316,0.515469845288373,0.403367049246685,0.22237804384487,0,0,0.164698954724011,1.25667604400135,0.795825888164603,0.779856348476481,0,0,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0.387904974335251,0.280543279561274,0.0632365371242573,0,0.156998727841375,0.123397163921801,0.592905254174298,0.166845105716094,0.786235980452812,0.899448449539415,0.811440485554012,0.964708639009667,1.52775511068852,3.16465751195892,2.2698931748505,1.09824565275233,2.87536413054709,1.11642284300551,1.87222603868736,0.757736633841335,0.538192240565737,0.482443521363367,0,0.189491411770485,0.162964976442026,0,0.234690248288502,0.167506257441816,0.476087281772027,0.585400943573396,0,0,0.318909537314974,0.163863314715738,0.345369963731791,0,0,0,0,0,0.160550589987792,0.35163505977661,0.327869890753351,2.27223834483936,0,0,0.215423397732799,0.238968797952552,0.668396022247182,0.283076530788832,0,0.584511715822624,0.395287777946524,0.963963949265421,2.2710413633323,0.35613120733451,0.977321756121456,0.329940245945071,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,1.09060118843252,0,0,0,0,0,0.540183282093931,0.517434735131018,0.214337035031592,0.886701168211368,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0.32977250588296,0.161464426695906,0.0603129249281559,0,0.820704498725306,0,0,0.341741761595705,1.44470807574256,0.555583582109135,0.941842285023455,0.27338845544205,0.457556346413045,0,0,0.276399947608848,0.954670618015114,0,0.609958401380546,0.432021363287205,0.209088296014469,0.218362563746178,0,0.165306911450672,0.26175594198403,0.518459893167171,1.24267862617385,0,0.747582730219894,0.827292452285488,0.777804753376191,0.516639293910924,0.168956125490778,0.704143431874524,0.651021924219751,0.629156066554265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.19318959403219,0,0,0,0,3.3885110557024,4.60325236507177,2.86447756719698,6.35856774671644,7.53590771747707,8.3093328712867,6.75022500231806,6.30449684513909,6.79713613476307,6.21312374102184,0,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0.666740183404846,0.412070114477788,0.64183841918363,0.505394423527595,0.760437899670719,0.377252682772152,0.0936415074698824,0.384150914429216,0.229741875822453,0.476293691283074,0.115884325944855,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.70990322463735,0.238436189947321,0.145346416632329,0.470546902076653,0.0846146078916765,0.365855945745545,0.526139422875686,0.271608227691724,0,0,0.197008964751127,0.409231043169689,0.619747364743864,0.385813221962283,0,0.233931608445408,0.644613162144895,1.14772999241306,0.441182838239031,0.231867835620421 | ||
|short_description=p6@St3gal5 | |short_description=p6@St3gal5 | ||
}} | }} |
Latest revision as of 17:04, 1 October 2015
Short description: | p6@St3gal5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_St3gal5_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 210bp_to_ENSMUST00000114112, NM_011375, uc009chz.1_5end |
EntrezGene: | St3gal5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.08e-24 | 10 |
visual cortex | 1.08e-24 | 10 |
neocortex | 1.08e-24 | 10 |
regional part of cerebral cortex | 6.95e-19 | 17 |
cerebral cortex | 1.59e-17 | 21 |
cerebral hemisphere | 1.59e-17 | 21 |
pallium | 1.59e-17 | 21 |
brain grey matter | 7.91e-12 | 29 |
regional part of telencephalon | 7.91e-12 | 29 |
telencephalon | 7.91e-12 | 29 |
gray matter | 1.22e-09 | 34 |
regional part of brain | 1.22e-08 | 46 |
brain | 2.20e-08 | 47 |
future brain | 2.20e-08 | 47 |
regional part of forebrain | 5.05e-08 | 39 |
forebrain | 5.05e-08 | 39 |
future forebrain | 5.05e-08 | 39 |
anatomical conduit | 6.28e-08 | 122 |
anterior neural tube | 9.49e-08 | 40 |
structure with developmental contribution from neural crest | 2.45e-07 | 92 |
neural tube | 3.00e-07 | 52 |
neural rod | 3.00e-07 | 52 |
future spinal cord | 3.00e-07 | 52 |
neural keel | 3.00e-07 | 52 |
regional part of nervous system | 7.41e-07 | 54 |