FFCP PHASE1:Hg19::chr15:29131103..29131186,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=321 | |EntrezGene=321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=579 | |HGNC=579 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000558330,ENST00000558402,uc010azj.2,uc010uas.1,uc010uat.1_5end | |association_with_transcript=0bp_to_ENST00000558330,ENST00000558402,uc010azj.2,uc010uas.1,uc010uat.1_5end | ||
|cluster_id=chr15:29131103..29131186,+ | |||
|description=CAGE_peak_2_at_APBA2_5end | |description=CAGE_peak_2_at_APBA2_5end | ||
|id=chr15:29131103..29131186,+ | |id=chr15:29131103..29131186,+ | ||
|ontology_enrichment_celltype=CL:0000222!5.71e-17!119;CL:0000115!2.19e-11!35;CL:0002321!4.38e-11!248;CL:0000220!4.71e-11!246;CL:0002078!1.16e-10!44;CL:0002139!5.61e-10!24;CL:0000055!6.59e-10!180;CL:0000213!1.09e-09!57;CL:0000215!1.09e-09!57;CL:0000183!1.75e-08!59;CL:0000393!2.41e-08!60;CL:0000211!2.41e-08!60;CL:0000071!1.31e-07!18;CL:0002546!1.31e-07!18;CL:1000449!2.83e-07!16;CL:0002319!4.17e-07!25;CL:0000187!5.39e-07!54 | |ontology_enrichment_celltype=CL:0000222!5.71e-17!119;CL:0000115!2.19e-11!35;CL:0002321!4.38e-11!248;CL:0000220!4.71e-11!246;CL:0002078!1.16e-10!44;CL:0002139!5.61e-10!24;CL:0000055!6.59e-10!180;CL:0000213!1.09e-09!57;CL:0000215!1.09e-09!57;CL:0000183!1.75e-08!59;CL:0000393!2.41e-08!60;CL:0000211!2.41e-08!60;CL:0000071!1.31e-07!18;CL:0002546!1.31e-07!18;CL:1000449!2.83e-07!16;CL:0002319!4.17e-07!25;CL:0000187!5.39e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000115;1.59e-10;36!CL:0002139;1.71e-10;24!CL:0002078;2.40e-08;45!CL:1000449;4.69e-08;15!CL:0000071;6.28e-08;18!CL:0002319;4.56e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.42e-17,121;CL:0000115,3.96e-12,36;CL:0002078,8.41e-12,45;CL:0002139,1.38e-10,24;CL:0000213,1.71e-10,58;CL:0000215,1.71e-10,58;CL:0002321,7.45e-10,250;CL:0000071,4.78e-08,18;CL:0002546,4.78e-08,18;CL:1000449,6.71e-08,15;CL:0000393,1.00e-07,61;CL:0000211,1.00e-07,61;CL:0002319,2.96e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002546;6.28e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!3.82e-22!312;UBERON:0000073!5.44e-22!94;UBERON:0001016!5.44e-22!94;UBERON:0005743!1.05e-21!86;UBERON:0000483!1.95e-21!309;UBERON:0001017!1.22e-20!82;UBERON:0000025!2.11e-19!194;UBERON:0003075!3.40e-17!86;UBERON:0007284!3.40e-17!86;UBERON:0002346!3.74e-17!90;UBERON:0004111!5.79e-17!241;UBERON:0000955!6.91e-17!69;UBERON:0006238!6.91e-17!69;UBERON:0000477!7.81e-17!286;UBERON:0001049!1.39e-16!57;UBERON:0005068!1.39e-16!57;UBERON:0006241!1.39e-16!57;UBERON:0007135!1.39e-16!57;UBERON:0002616!6.23e-16!59;UBERON:0000033!1.09e-15!123;UBERON:0000153!6.03e-15!129;UBERON:0007811!6.03e-15!129;UBERON:0003056!3.09e-14!61;UBERON:0000924!4.86e-14!173;UBERON:0006601!4.86e-14!173;UBERON:0004121!7.24e-14!169;UBERON:0001893!6.30e-13!34;UBERON:0000956!7.03e-13!25;UBERON:0000203!7.03e-13!25;UBERON:0001869!1.03e-12!32;UBERON:0002020!1.04e-12!34;UBERON:0003528!1.04e-12!34;UBERON:0002049!1.39e-12!79;UBERON:0007798!1.39e-12!79;UBERON:0002791!1.80e-12!33;UBERON:0002780!6.84e-12!41;UBERON:0001890!6.84e-12!41;UBERON:0006240!6.84e-12!41;UBERON:0000475!1.09e-11!365;UBERON:0003080!1.16e-11!42;UBERON:0002619!1.69e-11!22;UBERON:0004535!3.14e-11!110;UBERON:0001950!1.28e-10!20;UBERON:0000481!1.34e-10!347;UBERON:0001009!2.33e-10!113;UBERON:0000055!8.18e-10!69;UBERON:0001981!2.60e-08!60;UBERON:0007500!2.60e-08!60;UBERON:0004537!2.60e-08!60;UBERON:0006965!2.60e-08!60;UBERON:0001986!1.31e-07!18;UBERON:0004638!1.31e-07!18;UBERON:0004852!1.31e-07!18;UBERON:0003914!1.49e-07!118;UBERON:0004211!2.83e-07!16;UBERON:0001285!2.83e-07!16;UBERON:0007684!2.83e-07!16;UBERON:0003220!2.83e-07!16;UBERON:0004208!2.83e-07!16;UBERON:0004872!7.70e-07!84;UBERON:0006555!8.20e-07!17;UBERON:0005103!8.20e-07!17;UBERON:0000083!8.20e-07!17;UBERON:0009201!8.20e-07!17;UBERON:0004819!8.20e-07!17;UBERON:0006553!8.20e-07!17;UBERON:0003074!8.20e-07!17;UBERON:0003060!8.20e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.46e-13;25!UBERON:0000203;1.46e-13;25!UBERON:0001869;3.21e-12;32!UBERON:0002619;4.65e-12;22!UBERON:0001893;6.00e-12;34!UBERON:0002791;8.56e-12;32!UBERON:0003528;8.91e-12;34!UBERON:0002020;8.91e-12;34!UBERON:0001950;3.95e-11;20!UBERON:0000073;3.39e-09;53!UBERON:0002616;3.39e-09;53!UBERON:0002780;7.14e-09;41!UBERON:0001890;7.14e-09;41!UBERON:0001017;2.64e-08;75!UBERON:0006555;4.69e-08;15!UBERON:0004819;4.69e-08;15!UBERON:0001285;4.69e-08;15!UBERON:0007684;4.69e-08;15!UBERON:0004638;6.28e-08;18!UBERON:0001986;6.28e-08;18!UBERON:0004852;6.28e-08;18!UBERON:0001016;8.32e-08;83!UBERON:0000955;1.03e-07;68!UBERON:0003914;6.45e-07;74!UBERON:0000353;6.51e-07;15 | |||
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|phase1_expression=0.54503513781167,0.428201047781966,0.281908808191942,1.0007329835313,0,3.48935409640147,0,1.89515962028049,0,5.16041266653169,2.09340350391728,0.218441372130172,0.263766978228454,2.97039247104112,4.63956326019082,4.03395087871065,1.80808358407193,4.38186054232424,6.34312638427659,7.87974771691443,9.38403179723564,7.20945859399602,6.01095572975219,7.52809337900863,6.52821725892975,0,0,0,0,0.383829398097213,0.619264493264304,2.75826367343678,2.409647350226,1.10926203050036,0,0,0,0.553995408531877,1.20326668482085,0.868043482863407,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0.263384084775077,5.31116379307349,3.93010762749165,3.90642848099067,0,5.54067853277104,1.89379122293893,13.6378709885538,0,0.294605907474837,0.664601683750863,0.270803863765016,0,0,0.328875809207352,0.829050053357545,0.289803085735052,7.41432815810302,9.89901063931938,12.5442628565972,0.113309342697566,2.68254345521345,3.77990190030893,4.30133476433155,3.18565414324097,2.60433381542567,3.8018081777935,4.66782869141096,4.99147783502232,3.74792179657038,4.02521328474829,2.46338399076314,3.22570789159572,2.13952156626806,6.95157138637435,2.43806866313962,2.68280343881454,4.60305222636709,0,0.50133791063589,0.289693037921647,0,0,3.97046232089085,3.76939975686359,4.3917392846563,2.16115474571226,0.364295288292542,0,0,0.348259474598534,0.132957960518865,0.238490624305342,0,0,4.37277296206751,9.46258054616737,7.28995053375948,6.21838736116411,12.1654836500873,8.52865930014209,8.98678356108286,6.46041897923322,8.18262404179434,4.68608857870538,4.02829317109147,6.84244895146661,14.8877855104383,2.57364156242108,8.91156142669936,2.50039239195423,1.79623498100936,3.49095589498299,4.5994991239765,5.69559395740877,6.96166626935548,0,0,1.74437620857014,0.496971951695318,1.8994576749687,1.72131935057184,0.573673241497627,1.41867352879343,2.24271040056923,6.4049397437823,3.94668077467456,3.42332138939743,5.52313755485721,4.41347138406339,3.63257826347835,2.30470369792,9.13853584151807,1.5608003841516,5.13424639390004,0.448346041655403,4.69737994575059,4.04682360920329,5.19667984798319,2.04154171254893,10.563751288812,2.58314452939414,3.56400857184616,6.18167323196392,2.73048408581408,2.15585442544872,8.75347792561144,8.50805935129356,4.98715407871529,0.877955241761676,0.30648779579902,3.45547535485173,2.83580457900053,0.358779271377724,0.213557388818567,0,0.300091096084402,0.206105058476878,0,0.18611685633159,1.85653965465393,1.26668106709558,0.252433774244115,0.184099797284599,0.80823028409406,0.355009592516614,0.403008392910561,2.37384829234683,0.193260853163297,1.09098448236334,0.286804595389004,1.70763188581434,2.12047629314376,2.5562667431294,4.35376431064556,2.77552935963191,3.6497735907583,0,0,1.38134921352481,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,9.59602091012043,22.4386838085513,3.7041661019826,13.2307840246988,0,0,0.590789906681404,0,0,3.25978839567199,0.98775256867763,2.24803506515239,0.703702806881416,2.40729957412177,5.86454949558584,7.27954349695705,2.88662684050547,11.0133884726323,1.29149563659404,5.05282567163758,6.01881166349594,5.89787871927255,0,0,0,0,0,0.93733833986777,0.671928512795438,0.567100388969546,0,0.871901815541886,2.30029607499127,0,0,0,0,0,4.19086102328316,9.93169906451522,5.86087236050235,5.13217338068116,8.22619941626588,0,6.00235508524214,7.73704481982989,2.1798003441664,3.88692914851035,2.32689088364,0,5.071816515336,1.06375246633948,2.08014873822732,6.68739173081569,4.25547396069835,4.52917704327369,4.14636181608628,3.7983512377401,10.70212437815,1.30294473717494,3.909311436168,5.543663110534,3.91871190177462,6.97226766880235,3.09916272664377,0,0,0,6.23024624278115,4.59447743336456,0,2.17171960001369,0.61642896765115,1.61154866915906,0,2.75843064282698,1.72502059887614,4.74869234235069,6.09827098133912,9.10978977003352,12.3726210044431,8.04078073604874,13.3967137847164,0,0,0.414415513436035,2.57652132610194,3.00102312635806,2.17012018959788,0.207970861530807,0.892144943985809,0.157702415033935,0,2.40756879782175,2.27407504055985,1.03473071292505,1.99267679560631,2.76553752812555,1.91143951829782,6.85304051119592,1.71571711905428,2.48121631347465,2.5885704098234,2.56146138728266,0,1.66435439510497,0.30239029332968,0.992431231275107,0,0.280660094433074,0.640695746278505,1.02341449813341,1.44768529029247,0,0,0.355123450626254,0.246381468041427,1.55776328755086,0,0,2.20557117333613,1.19705285616665,1.7222167224691,2.1850940160806,3.67148361886388,11.2799903226853,4.6979355633693,15.6869953835371,17.5367069583913,3.4832037534649,19.3346752920524,8.33459155854927,5.18198198645135,4.62681758070868,8.39933956385944,8.52872615553251,3.05851527654046,6.64860807142979,7.83561641527624,0,0,4.35965212697862,7.87235149679294,4.22991913063594,0.309123034943167,0,0,0,1.30012049207304,1.6068392984416,3.28680442193215,2.92692372517824,2.91656981979646,4.54860689198951,3.007766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| ||
|short_description=p2@APBA2 | |short_description=p2@APBA2 | ||
}} | }} |
Latest revision as of 02:17, 17 September 2015
Short description: | p2@APBA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_APBA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000558330, ENST00000558402, uc010azj.2, uc010uas.1, uc010uat.1_5end |
EntrezGene: | APBA2 |
HGNC: | 579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.42e-17 | 121 |
endothelial cell | 3.96e-12 | 36 |
meso-epithelial cell | 8.41e-12 | 45 |
endothelial cell of vascular tree | 1.38e-10 | 24 |
lining cell | 1.71e-10 | 58 |
barrier cell | 1.71e-10 | 58 |
embryonic cell | 7.45e-10 | 250 |
blood vessel endothelial cell | 4.78e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.78e-08 | 18 |
epithelial cell of nephron | 6.71e-08 | 15 |
electrically responsive cell | 1.00e-07 | 61 |
electrically active cell | 1.00e-07 | 61 |
neural cell | 2.96e-07 | 25 |