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FFCP PHASE1:Hg19::chr10:105846063..105846083,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr10:105846063..105846083,-
|DHSsupport=supported 
|short_description=p5@COL17A1
|DPIdataset=robust
|description=CAGE_peak_5_at_COL17A1_5end
|association_with_transcript=-303bp_to_ENST00000353479,ENST00000369733_5end
|EntrezGene=1308
|EntrezGene=1308
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=2194
|HGNC=2194
|TSSclassifier=strong
|UniProt=Q9UMD9
|UniProt=Q9UMD9
|association_with_transcript=-303bp_to_ENST00000353479,ENST00000369733_5end
|cluster_id=chr10:105846063..105846083,-
|coexpression_cluster_id=C139
|description=CAGE_peak_5_at_COL17A1_5end
|id=chr10:105846063..105846083,-
|ontology_enrichment_celltype=CL:0002076!2.70e-28!43;CL:0000066!1.94e-21!254;CL:0002159!4.15e-20!13;CL:0000223!3.84e-19!59;CL:0002251!1.25e-16!21;CL:0002368!6.32e-15!13;CL:0002621!1.01e-11!3;CL:0002166!1.58e-11!3;CL:0000349!3.37e-11!3;CL:0002577!3.37e-11!3;CL:0000622!6.56e-11!5;CL:0000362!1.54e-10!8;CL:0002541!1.91e-10!3;CL:0002077!3.96e-10!33;CL:0000240!2.97e-09!6;CL:0000311!2.97e-09!6;CL:0000079!2.97e-09!6;CL:0000237!2.97e-09!6;CL:0000036!2.97e-09!6;CL:0000357!2.97e-09!6;CL:0000114!2.97e-09!6;CL:0000154!4.28e-09!6;CL:0000244!7.78e-09!4;CL:0000731!7.78e-09!4;CL:0002536!3.26e-08!2;CL:0000317!5.11e-08!2;CL:1000448!5.11e-08!2;CL:0002308!5.11e-08!2;CL:0002140!5.11e-08!2;CL:0000220!4.20e-07!246;CL:0002321!5.49e-07!248
|ontology_enrichment_celltype_v019=CL:0002621;2.28e-27;3!CL:0002166;1.73e-26;3!CL:0002159;1.44e-21;14!CL:0000244;1.83e-20;4!CL:0000731;1.83e-20;4!CL:0002536;2.89e-18;2!CL:0000317;5.82e-18;2!CL:1000448;5.82e-18;2!CL:0002308;5.82e-18;2!CL:0002140;5.82e-18;2!CL:0002577;6.98e-13;3!CL:0000349;2.30e-11;19!CL:0002336;7.54e-10;1!CL:0002261;7.54e-10;1!CL:0002170;7.54e-10;1!CL:0002076;2.25e-09;42!CL:0000362;4.51e-09;9!CL:0002077;6.59e-08;34!CL:0000622;9.88e-08;5!CL:0002251;2.99e-07;20
|ontology_enrichment_celltype_v019_2=CL:0002621,2.50e-27,3;CL:0002166,7.88e-27,3;CL:0002159,1.20e-21,14;CL:0000244,1.50e-20,4;CL:0000731,1.50e-20,4;CL:0002536,2.04e-18,2;CL:0000317,6.35e-18,2;CL:1000448,6.35e-18,2;CL:0002308,6.35e-18,2;CL:0002140,6.35e-18,2;CL:0002577,6.20e-13,3;CL:0000066,6.78e-12,253;CL:0000349,2.25e-11,19;CL:0002336,1.07e-09,1;CL:0002261,1.07e-09,1;CL:0002170,1.07e-09,1;CL:0002076,2.01e-09,42;CL:0000362,5.05e-09,9;CL:0002077,1.15e-08,34;CL:0000622,1.02e-07,5;CL:0002251,3.25e-07,20
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005631!4.79e-32!14;UBERON:0000158!4.79e-32!14;UBERON:0003124!1.60e-22!7;UBERON:0000478!1.58e-17!24;UBERON:0001987!8.25e-14!4;UBERON:0004340!8.25e-14!4;UBERON:0000305!4.58e-12!7;UBERON:0001949!1.01e-11!3;UBERON:0000365!2.42e-11!5;UBERON:0004119!8.58e-11!169;UBERON:0000925!8.58e-11!169;UBERON:0006595!8.58e-11!169;UBERON:0004871!1.64e-10!8;UBERON:0000476!1.91e-10!3;UBERON:0000920!1.91e-10!3;UBERON:0004923!1.69e-09!57;UBERON:0005910!1.88e-09!6;UBERON:0001708!9.80e-09!4;UBERON:0001704!9.80e-09!4;UBERON:0002419!5.11e-08!2;UBERON:0007771!5.11e-08!2;UBERON:0003297!5.11e-08!2;UBERON:0001821!5.11e-08!2;UBERON:0003487!5.11e-08!2;UBERON:0001820!5.11e-08!2;UBERON:0005089!5.11e-08!2;UBERON:0005088!5.11e-08!2
|ontology_enrichment_uberon_v019=UBERON:0001949;2.28e-27;3!UBERON:0000486;3.71e-26;12!UBERON:0001708;4.90e-20;4!UBERON:0008895;4.90e-20;4!UBERON:0002419;5.82e-18;2!UBERON:0007771;5.82e-18;2!UBERON:0003297;5.82e-18;2!UBERON:0001821;5.82e-18;2!UBERON:0003487;5.82e-18;2!UBERON:0001820;5.82e-18;2!UBERON:0000365;1.70e-16;5!UBERON:0011159;3.73e-16;5!UBERON:0005910;7.63e-14;6!UBERON:0003929;4.49e-12;7!UBERON:0003729;4.43e-11;13!UBERON:0003350;1.25e-10;8!UBERON:0001828;1.25e-10;8!UBERON:0001987;6.93e-10;4!UBERON:0010371;1.00e-09;31!UBERON:0000478;5.79e-09;24!UBERON:0005911;1.20e-08;36!UBERON:0005631;2.66e-08;10!UBERON:0000158;2.66e-08;10!UBERON:0011137;1.25e-07;11!UBERON:0010323;1.25e-07;11!UBERON:0000344;2.99e-07;20!UBERON:0004923;3.10e-07;55
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.50e-27,3;UBERON:0001708,2.72e-20,4;UBERON:0008895,2.72e-20,4;UBERON:0002419,6.35e-18,2;UBERON:0007771,6.35e-18,2;UBERON:0003297,6.35e-18,2;UBERON:0001821,6.35e-18,2;UBERON:0003487,6.35e-18,2;UBERON:0001820,6.35e-18,2;UBERON:0005089,6.35e-18,2;UBERON:0005088,6.35e-18,2;UBERON:0000365,1.45e-16,5;UBERON:0011159,2.33e-16,5;UBERON:0005631,1.77e-15,14;UBERON:0000158,1.77e-15,14;UBERON:0005910,6.70e-14,6;UBERON:0010188,9.91e-14,6;UBERON:0002539,9.91e-14,6;UBERON:0008816,9.91e-14,6;UBERON:0003124,7.84e-12,7;UBERON:0003729,5.05e-11,13;UBERON:0003350,1.29e-10,8;UBERON:0001828,1.29e-10,8;UBERON:0001987,6.34e-10,4;UBERON:0004340,6.34e-10,4;UBERON:0004923,1.97e-09,66;UBERON:0000478,5.69e-09,24;UBERON:0003102,8.35e-09,99;UBERON:0010323,1.01e-07,11;UBERON:0000344,3.25e-07,20;UBERON:0000033,6.47e-07,56
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|short_description=p5@COL17A1
}}
}}

Latest revision as of 05:04, 16 September 2015

Short description:p5@COL17A1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_5_at_COL17A1_5end
Coexpression cluster:C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal
Association with transcript: -303bp_to_ENST00000353479, ENST00000369733_5end
EntrezGene:COL17A1
HGNC: 2194
UniProt: Q9UMD9
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data