FFCP PHASE1:Mm9::chr7:148661358..148661361,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=64540 | |EntrezGene=64540 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=D3Z0B7 | |UniProt=D3Z0B7 | ||
|association_with_transcript=-47bp_to_ENSMUST00000138092_5end | |association_with_transcript=-47bp_to_ENSMUST00000138092_5end | ||
|cluster_id=chr7:148661358..148661361,+ | |||
|description=CAGE_peak_8_at_Tspan4_5end | |description=CAGE_peak_8_at_Tspan4_5end | ||
|id=chr7:148661358..148661361,+ | |id=chr7:148661358..148661361,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.72e-14,54;CL:0002453,1.24e-12,8;CL:0000128,5.40e-10,6;CL:0000126,5.40e-10,6;CL:0000127,5.40e-10,6;CL:0000333,1.02e-09,10;CL:0000095,1.02e-09,10;CL:0000243,1.02e-09,10;CL:0000123,1.02e-09,10;CL:0000125,1.02e-09,10;CL:0000030,1.02e-09,10;CL:0000339,1.02e-09,10;CL:0002320,2.23e-09,46;CL:0000134,2.23e-09,46;CL:0000557,1.42e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!3.02e-12!49;UBERON:0005173!3.02e-12!49;UBERON:0002417!3.02e-12!49;UBERON:0000916!3.02e-12!49;UBERON:0003914!7.91e-12!47;UBERON:0009569!3.69e-11!66;UBERON:0002365!1.10e-10!25;UBERON:0002330!1.10e-10!25;UBERON:0002107!9.13e-10!22;UBERON:0007499!9.13e-10!22;UBERON:0006925!9.13e-10!22;UBERON:0009497!9.13e-10!22;UBERON:0000015!9.13e-10!22;UBERON:0002423!9.13e-10!22;UBERON:0006235!9.13e-10!22;UBERON:0008835!9.13e-10!22;UBERON:0003894!9.13e-10!22;UBERON:0004161!9.13e-10!22;UBERON:0008836!9.13e-10!22;UBERON:0009854!9.87e-09!23;UBERON:0009856!9.87e-09!23;UBERON:0005177!1.14e-08!85;UBERON:0002100!1.75e-08!98;UBERON:0000926!2.25e-08!193;UBERON:0004120!2.25e-08!193;UBERON:0006603!2.25e-08!193;UBERON:0005256!1.28e-07!47;UBERON:0000466!6.38e-07!79 | |ontology_enrichment_uberon=UBERON:0005172!3.02e-12!49;UBERON:0005173!3.02e-12!49;UBERON:0002417!3.02e-12!49;UBERON:0000916!3.02e-12!49;UBERON:0003914!7.91e-12!47;UBERON:0009569!3.69e-11!66;UBERON:0002365!1.10e-10!25;UBERON:0002330!1.10e-10!25;UBERON:0002107!9.13e-10!22;UBERON:0007499!9.13e-10!22;UBERON:0006925!9.13e-10!22;UBERON:0009497!9.13e-10!22;UBERON:0000015!9.13e-10!22;UBERON:0002423!9.13e-10!22;UBERON:0006235!9.13e-10!22;UBERON:0008835!9.13e-10!22;UBERON:0003894!9.13e-10!22;UBERON:0004161!9.13e-10!22;UBERON:0008836!9.13e-10!22;UBERON:0009854!9.87e-09!23;UBERON:0009856!9.87e-09!23;UBERON:0005177!1.14e-08!85;UBERON:0002100!1.75e-08!98;UBERON:0000926!2.25e-08!193;UBERON:0004120!2.25e-08!193;UBERON:0006603!2.25e-08!193;UBERON:0005256!1.28e-07!47;UBERON:0000466!6.38e-07!79 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.38e-16,22;UBERON:0007499,5.38e-16,22;UBERON:0006925,5.38e-16,22;UBERON:0009497,5.38e-16,22;UBERON:0000015,5.38e-16,22;UBERON:0002423,5.38e-16,22;UBERON:0006235,5.38e-16,22;UBERON:0008835,5.38e-16,22;UBERON:0003894,5.38e-16,22;UBERON:0004161,5.38e-16,22;UBERON:0008836,5.38e-16,22;UBERON:0002365,2.37e-15,25;UBERON:0002330,2.37e-15,25;UBERON:0009854,4.39e-15,23;UBERON:0009856,4.39e-15,23;UBERON:0005172,3.88e-13,49;UBERON:0005173,3.88e-13,49;UBERON:0002417,3.88e-13,49;UBERON:0000916,3.88e-13,49;UBERON:0003914,2.42e-10,47;UBERON:0003104,4.37e-10,61;UBERON:0009142,4.37e-10,61;UBERON:0002384,2.23e-09,46;UBERON:0005256,5.18e-08,45;UBERON:0009569,5.67e-08,66;UBERON:0005177,1.31e-07,79;UBERON:0002100,4.22e-07,90 | |||
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| ||
|short_description=p8@Tspan4 | |short_description=p8@Tspan4 | ||
}} | }} |
Latest revision as of 04:09, 26 September 2015
Short description: | p8@Tspan4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Tspan4_5end |
Coexpression cluster: | NA |
Association with transcript: | -47bp_to_ENSMUST00000138092_5end |
EntrezGene: | Tspan4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 2.72e-14 | 54 |
oligodendrocyte precursor cell | 1.24e-12 | 8 |
oligodendrocyte | 5.40e-10 | 6 |
macroglial cell | 5.40e-10 | 6 |
astrocyte | 5.40e-10 | 6 |
migratory neural crest cell | 1.02e-09 | 10 |
neuron associated cell | 1.02e-09 | 10 |
glial cell (sensu Vertebrata) | 1.02e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 1.02e-09 | 10 |
glial cell | 1.02e-09 | 10 |
glioblast | 1.02e-09 | 10 |
glioblast (sensu Vertebrata) | 1.02e-09 | 10 |
connective tissue cell | 2.23e-09 | 46 |
mesenchymal cell | 2.23e-09 | 46 |
granulocyte monocyte progenitor cell | 1.42e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
liver | 5.38e-16 | 22 |
epithelial sac | 5.38e-16 | 22 |
digestive gland | 5.38e-16 | 22 |
epithelium of foregut-midgut junction | 5.38e-16 | 22 |
anatomical boundary | 5.38e-16 | 22 |
hepatobiliary system | 5.38e-16 | 22 |
foregut-midgut junction | 5.38e-16 | 22 |
hepatic diverticulum | 5.38e-16 | 22 |
liver primordium | 5.38e-16 | 22 |
septum transversum | 5.38e-16 | 22 |
liver bud | 5.38e-16 | 22 |
exocrine gland | 2.37e-15 | 25 |
exocrine system | 2.37e-15 | 25 |
digestive tract diverticulum | 4.39e-15 | 23 |
sac | 4.39e-15 | 23 |
abdomen element | 3.88e-13 | 49 |
abdominal segment element | 3.88e-13 | 49 |
abdominal segment of trunk | 3.88e-13 | 49 |
abdomen | 3.88e-13 | 49 |
epithelial tube | 2.42e-10 | 47 |
mesenchyme | 4.37e-10 | 61 |
entire embryonic mesenchyme | 4.37e-10 | 61 |
connective tissue | 2.23e-09 | 46 |
trunk mesenchyme | 5.18e-08 | 45 |
subdivision of trunk | 5.67e-08 | 66 |
trunk region element | 1.31e-07 | 79 |
trunk | 4.22e-07 | 90 |