FFCP PHASE1:Hg19::chr10:123845267..123845279,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:123845267..123845279,+
|short_description=p@chr10:123845267..123845279,+
|description=CAGE_peak_at_chr10:123845267..123845279,+
|association_with_transcri...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:123845267..123845279,+ | |||
|coexpression_cluster_id=C1302 | |||
|description=CAGE_peak_at_chr10:123845267..123845279,+ | |||
|id=chr10:123845267..123845279,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.30e-30!43;CL:0000223!5.03e-21!59;CL:0002251!1.98e-18!21;CL:0002368!1.23e-14!13;CL:0002623!6.08e-14!3;CL:0000066!8.50e-13!254;CL:0000575!5.31e-09!2;CL:0000622!1.59e-08!5;CL:0000076!1.98e-08!62;CL:0002159!1.33e-07!13;CL:0000154!3.66e-07!6;CL:0000240!5.97e-07!6;CL:0000311!5.97e-07!6;CL:0000079!5.97e-07!6;CL:0000237!5.97e-07!6;CL:0000036!5.97e-07!6;CL:0000357!5.97e-07!6;CL:0000114!5.97e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002623;1.98e-38;3!CL:0000622;1.52e-23;5!CL:0000154;8.22e-20;6!CL:0001014;2.37e-15;2!CL:0001016;2.37e-15;2!CL:0000150;1.44e-13;9!CL:0002251;2.05e-13;20!CL:0000453;6.39e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.18e-38,3;CL:0000622,1.61e-23,5;CL:0000154,8.63e-20,6;CL:0001014,2.37e-15,2;CL:0001016,2.37e-15,2;CL:0000150,1.49e-13,9;CL:0002251,2.01e-13,20;CL:0000453,6.39e-07,5;CL:0002076,9.61e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.02e-17!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.15e-29;1!DOID:3149;1.15e-29;1!DOID:3451;1.43e-15;2!DOID:4159;1.43e-15;2!DOID:0060122;1.43e-15;2!DOID:1749;4.47e-09;14!DOID:4362;5.23e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.33e-29,1;DOID:3149,1.33e-29,1;DOID:3451,1.54e-15,2;DOID:4159,1.54e-15,2;DOID:0060122,1.54e-15,2;DOID:1749,4.56e-09,14;DOID:4362,4.79e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000161!4.63e-17!35;UBERON:0000166!1.07e-14!21;UBERON:0003729!7.31e-14!5;UBERON:0000165!3.72e-13!28;UBERON:0000930!3.72e-13!28;UBERON:0003102!3.59e-11!95;UBERON:0001004!4.91e-11!72;UBERON:0003343!3.84e-10!4;UBERON:0004785!3.84e-10!4;UBERON:0004119!5.24e-10!169;UBERON:0000925!5.24e-10!169;UBERON:0006595!5.24e-10!169;UBERON:0001444!5.64e-10!48;UBERON:0001044!3.66e-07!6;UBERON:0003293!3.66e-07!6;UBERON:0003294!3.66e-07!6;UBERON:0010047!3.66e-07!6;UBERON:0000167!3.66e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;8.22e-20;6!UBERON:0003293;8.22e-20;6!UBERON:0003294;8.22e-20;6!UBERON:0010047;8.22e-20;6!UBERON:0003408;8.22e-20;6!UBERON:0000167;8.22e-20;6!UBERON:0000161;4.43e-14;19!UBERON:0000166;4.43e-14;19!UBERON:0000165;8.68e-10;28!UBERON:0001041;4.47e-09;14!UBERON:0000014;1.89e-08;4!UBERON:0003343;2.43e-08;4!UBERON:0004785;2.43e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,8.63e-20,6;UBERON:0003293,8.63e-20,6;UBERON:0003294,8.63e-20,6;UBERON:0010047,8.63e-20,6;UBERON:0000167,8.63e-20,6;UBERON:0003408,2.66e-12,10;UBERON:0000166,2.85e-12,22;UBERON:0000165,1.76e-09,29;UBERON:0000930,1.76e-09,29;UBERON:0000014,1.96e-08,4;UBERON:0003343,2.26e-08,4;UBERON:0004785,2.26e-08,4;UBERON:0000161,9.16e-08,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.904760751704678,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.828728900423067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.384380134730212,0.510450849978337,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,2.78847488557207,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0,2.68347750079413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55336503108073,0.544017803369474,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96295437002051,0.235939446695481,0.917142992608395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,1.03608082081518,0.85359238546975,2.76503864725637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.904760751704678,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.828728900423067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.384380134730212,0.510450849978337,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,2.78847488557207,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0,2.68347750079413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55336503108073,0.544017803369474,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96295437002051,0.235939446695481,0.917142992608395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,1.03608082081518,0.85359238546975,2.76503864725637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr10:123845267..123845279,+ | |||
}} | }} |
Latest revision as of 11:09, 23 July 2015
Short description: | p@chr10:123845267..123845279, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:123845267..123845279, + |
Coexpression cluster: | C1302_keratoacanthoma_cervical_immature_salivary_malignant_oral_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.18e-38 | 3 |
acinar cell | 1.61e-23 | 5 |
protein secreting cell | 8.63e-20 | 6 |
CD1a-positive Langerhans cell | 2.37e-15 | 2 |
immature CD1a-positive Langerhans cell | 2.37e-15 | 2 |
glandular epithelial cell | 1.49e-13 | 9 |
epithelial cell of alimentary canal | 2.01e-13 | 20 |
Langerhans cell | 6.39e-07 | 5 |
endo-epithelial cell | 9.61e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 8.63e-20 | 6 |
gland of oral region | 8.63e-20 | 6 |
gland of foregut | 8.63e-20 | 6 |
oral gland | 8.63e-20 | 6 |
oral cavity | 8.63e-20 | 6 |
gland of gut | 2.66e-12 | 10 |
oral opening | 2.85e-12 | 22 |
mouth | 1.76e-09 | 29 |
stomodeum | 1.76e-09 | 29 |
zone of skin | 1.96e-08 | 4 |
mucosa of oral region | 2.26e-08 | 4 |
respiratory system mucosa | 2.26e-08 | 4 |
orifice | 9.16e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.33e-29 | 1 |
keratoacanthoma | 1.33e-29 | 1 |
skin carcinoma | 1.54e-15 | 2 |
skin cancer | 1.54e-15 | 2 |
integumentary system cancer | 1.54e-15 | 2 |
squamous cell carcinoma | 4.56e-09 | 14 |
cervical cancer | 4.79e-07 | 5 |