FFCP PHASE1:Hg19::chr11:1855634..1855641,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90019 | |EntrezGene=90019 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19264 | |HGNC=19264 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NBV8 | |UniProt=Q8NBV8 | ||
|association_with_transcript=-32bp_to_ENST00000381968,NM_138567,uc001lue.1_5end | |association_with_transcript=-32bp_to_ENST00000381968,NM_138567,uc001lue.1_5end | ||
|cluster_id=chr11:1855634..1855641,+ | |||
|coexpression_cluster_id=C3124 | |||
|description=CAGE_peak_8_at_SYT8_5end | |description=CAGE_peak_8_at_SYT8_5end | ||
|id=chr11:1855634..1855641,+ | |id=chr11:1855634..1855641,+ | ||
|ontology_enrichment_celltype=CL:0002076!3.54e-13!43;CL:0000223!3.06e-10!59;CL:0002327!1.95e-09!4;CL:0002251!1.94e-07!21;CL:0002537!2.17e-07!5 | |ontology_enrichment_celltype=CL:0002076!3.54e-13!43;CL:0000223!3.06e-10!59;CL:0002327!1.95e-09!4;CL:0002251!1.94e-07!21;CL:0002537!2.17e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002149;6.07e-23;6!CL:0002255;6.07e-23;6!CL:0002541;2.31e-12;3!CL:0002327;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,5.43e-23,6;CL:0002255,5.43e-23,6;CL:0002541,2.31e-12,3;CL:0002327,1.57e-09,4;CL:0002076,7.40e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0005795;3.25e-14;10 | |||
|ontology_enrichment_disease=DOID:299!2.60e-08!25;DOID:305!8.81e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3001;6.07e-23;6!DOID:4929;1.07e-17;2!DOID:299;1.28e-12;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,5.43e-23,6;DOID:4929,1.27e-17,2;DOID:299,1.28e-12,25 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004913;7.06e-34;1!UBERON:0003703;7.06e-34;1!UBERON:0001174;7.06e-34;1!UBERON:0004914;7.06e-34;1!UBERON:0003124;2.31e-12;3!UBERON:0000920;2.31e-12;3!UBERON:0002114;2.89e-12;2!UBERON:0003343;1.12e-09;4!UBERON:0004785;1.12e-09;4!UBERON:0001911;1.57e-09;4!UBERON:0002394;1.57e-09;4!UBERON:0003928;1.57e-09;4!UBERON:0000995;8.90e-09;17!UBERON:0003975;2.42e-08;18!UBERON:0002108;7.01e-08;4!UBERON:0004175;2.77e-07;21!UBERON:0000974;7.17e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,9.85e-34,1;UBERON:0003703,9.85e-34,1;UBERON:0001174,9.85e-34,1;UBERON:0004914,9.85e-34,1;UBERON:0000920,2.31e-12,3;UBERON:0002114,3.24e-12,2;UBERON:0003343,1.12e-09,4;UBERON:0004785,1.12e-09,4;UBERON:0001911,1.57e-09,4;UBERON:0005333,1.57e-09,4;UBERON:0008425,1.57e-09,4;UBERON:0005311,1.57e-09,4;UBERON:0003100,5.45e-08,41;UBERON:0002108,7.49e-08,4;UBERON:0000995,2.69e-07,21;UBERON:0005795,5.24e-07,22;UBERON:0003975,5.24e-07,22;UBERON:0002394,9.49e-07,6;UBERON:0003928,9.49e-07,6 | |||
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| ||
|short_description=p8@SYT8 | |short_description=p8@SYT8 | ||
}} | }} |
Latest revision as of 02:56, 17 September 2015
Short description: | p8@SYT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SYT8_5end |
Coexpression cluster: | C3124_oral_chorionic_amniotic_Mammary_Small_gall_glassy |
Association with transcript: | -32bp_to_ENST00000381968, NM_138567, uc001lue.1_5end |
EntrezGene: | SYT8 |
HGNC: | 19264 |
UniProt: | Q8NBV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 5.43e-23 | 6 |
stromal cell of endometrium | 5.43e-23 | 6 |
chorionic membrane mesenchymal stem cell | 2.31e-12 | 3 |
mammary gland epithelial cell | 1.57e-09 | 4 |
endo-epithelial cell | 7.40e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 9.85e-34 | 1 |
extrahepatic bile duct | 9.85e-34 | 1 |
common bile duct | 9.85e-34 | 1 |
duodenal papilla | 9.85e-34 | 1 |
egg chorion | 2.31e-12 | 3 |
duodenum | 3.24e-12 | 2 |
mucosa of oral region | 1.12e-09 | 4 |
respiratory system mucosa | 1.12e-09 | 4 |
mammary gland | 1.57e-09 | 4 |
mammary bud | 1.57e-09 | 4 |
mammary ridge | 1.57e-09 | 4 |
mammary placode | 1.57e-09 | 4 |
female organism | 5.45e-08 | 41 |
small intestine | 7.49e-08 | 4 |
uterus | 2.69e-07 | 21 |
embryonic uterus | 5.24e-07 | 22 |
internal female genitalia | 5.24e-07 | 22 |
bile duct | 9.49e-07 | 6 |
digestive system duct | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 5.43e-23 | 6 |
tubular adenocarcinoma | 1.27e-17 | 2 |
adenocarcinoma | 1.28e-12 | 25 |