FFCP PHASE1:Hg19::chr11:2018305..2018318,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-50bp_to_ENST00000417089_5end | |association_with_transcript=-50bp_to_ENST00000417089_5end | ||
|cluster_id=chr11:2018305..2018318,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_8_at_H19_5end | |description=CAGE_peak_8_at_H19_5end | ||
|id=chr11:2018305..2018318,- | |id=chr11:2018305..2018318,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;4.25e-16;19!CL:0000188;4.70e-09;9!CL:0000680;4.81e-07;7!CL:0002577;9.82e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.59e-16,19;CL:0000188,2.34e-09,9;CL:0002577,9.84e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.64e-13!14;UBERON:0000158!2.64e-13!14;UBERON:0004923!6.90e-13!57;UBERON:0003104!2.26e-11!238;UBERON:0009142!2.26e-11!238;UBERON:0000478!1.20e-10!24;UBERON:0001737!2.32e-10!9;UBERON:0001557!6.40e-10!19;UBERON:0000481!2.40e-09!347;UBERON:0003124!7.26e-09!7;UBERON:0000064!2.34e-08!219;UBERON:0004119!2.50e-08!169;UBERON:0000925!2.50e-08!169;UBERON:0006595!2.50e-08!169;UBERON:0000077!2.96e-07!130;UBERON:0000468!3.03e-07!659;UBERON:0004921!3.03e-07!129;UBERON:0004185!3.03e-07!129;UBERON:0002100!6.31e-07!216;UBERON:0003103!9.54e-07!69 | |ontology_enrichment_uberon=UBERON:0005631!2.64e-13!14;UBERON:0000158!2.64e-13!14;UBERON:0004923!6.90e-13!57;UBERON:0003104!2.26e-11!238;UBERON:0009142!2.26e-11!238;UBERON:0000478!1.20e-10!24;UBERON:0001737!2.32e-10!9;UBERON:0001557!6.40e-10!19;UBERON:0000481!2.40e-09!347;UBERON:0003124!7.26e-09!7;UBERON:0000064!2.34e-08!219;UBERON:0004119!2.50e-08!169;UBERON:0000925!2.50e-08!169;UBERON:0006595!2.50e-08!169;UBERON:0000077!2.96e-07!130;UBERON:0000468!3.03e-07!659;UBERON:0004921!3.03e-07!129;UBERON:0004185!3.03e-07!129;UBERON:0002100!6.31e-07!216;UBERON:0003103!9.54e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;9.69e-19;16!UBERON:0002036;9.69e-19;16!UBERON:0000478;8.58e-16;24!UBERON:0001737;2.45e-15;9!UBERON:0001557;2.45e-15;9!UBERON:0005631;5.96e-14;10!UBERON:0000158;5.96e-14;10!UBERON:0000305;3.18e-09;7!UBERON:0003688;2.28e-08;6!UBERON:0002358;2.28e-08;6!UBERON:0003684;2.28e-08;6!UBERON:0001178;2.28e-08;6!UBERON:0001987;3.85e-08;4!UBERON:0002385;1.17e-07;31!UBERON:0001015;1.17e-07;31!UBERON:0000383;1.17e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.75e-20,14;UBERON:0000158,2.75e-20,14;UBERON:0000478,9.00e-16,24;UBERON:0001737,2.53e-15,9;UBERON:0003124,5.50e-13,7;UBERON:0001557,2.66e-11,19;UBERON:0000305,3.84e-09,7;UBERON:0004923,9.00e-09,66;UBERON:0003688,1.71e-08,6;UBERON:0002358,1.71e-08,6;UBERON:0003684,1.71e-08,6;UBERON:0001178,1.71e-08,6;UBERON:0001987,3.79e-08,4;UBERON:0004340,3.79e-08,4;UBERON:0002100,6.02e-08,199;UBERON:0004871,7.31e-08,8;UBERON:0001041,1.22e-07,87;UBERON:0005256,2.39e-07,122;UBERON:0003104,2.80e-07,160;UBERON:0009142,2.80e-07,160;UBERON:0004119,4.24e-07,160;UBERON:0000925,4.24e-07,160;UBERON:0006595,4.24e-07,160;UBERON:0004921,8.54e-07,118 | |||
|phase1_expression=5.26867299884614,3.21150785836475,1.69145284915165,4.00293193412522,2.68176656656373,27.9148327712118,0,0,0,1.47440361900905,1.39560233594486,33.4215299359164,33.2346392567852,0.74259811776028,1.65698687863958,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,1.39334510984468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.895037932904712,0,0.50133791063589,0,0,6.8128881842369,0.0945348171640679,0,0,0.261958150995425,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0.354668382198357,5.04609840128076,0,0,1.24484414159907,0,0.490385709340376,1.36221684880438,9.21881479167998,0.468642863667593,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,3.02104251460748,0.725627385107593,0.504641701751257,0,0,0,0,0,0,16.5629520055781,12.6438517558576,13.014595613708,15.2205682370704,12.854887201452,10.6771778599993,18.4718892179425,12.1657308377715,15.3898862778556,2.21446636387394,5.60967095213783,4.115740113314,13.2307840246988,0,0,2.36315962672562,0,0,0,0,0,0,6.85154494173119,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,1.04007436911366,0.514414748524284,0,0,1.57275793023962,136.198022953252,1.64648067356154,0,0.710783897485092,0.791951872933429,0,0,0,0,0,0,0,0,0,4.05387658669222,6.98619496671304,3.76028022803781,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,2.4538298343828,0,0.542530047399471,0,0,0,0,2.10662269809403,2.27407504055985,4.1389228517002,0,0.368738337083406,0,31.9155886664267,55.5892346573587,0,0,0,48.1972838599552,161.442376325182,58.3613266126283,9.17998888929474,0.61384789315225,6.45518217196069,2.69092213436972,2.55853624533352,2.2519548960105,14.8418066444991,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0,10.7959076883203,0,1.00337954770971,0,0,0,0,0,0,0,0.325378394664303,2.67906630284078,0,0,0,0,0,3.38347514022427,1.84858340537573,3.68408819342711,1.51620229732984,1.82614416276065,1.74020032697074,1.70453254832202,16.8270547372334,0,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,1.116475108079,1.58189712359363,0.38126038784765,0.255897791311334,4.70732886837312,0,0,0,0.274537029736055,0.235624804691373,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0,2.62357900818653,0,0.30982349809975,0,0.430234056612155,2.25972794330179,0,0,0.211107635297664,0,0.379473173765715,3.49934720244983,0,0,0,2.63602642174982,0.86101074534246,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,137.994312178385,70.9745587190006,182.146296344845,0,0,0,0,0,0.398495976502139,0.276283915531148,5.2905877049398,0,0,0,0,0,0,1.28236427328014,0,0,0,0,0,0,0,0,0.1137934482855,0,2.36387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.846452843541768,0,0,17.6822559487251,7.49666866261856,107.503390829657,7.87739303256016,291.570022482193,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.353830258013357,2.4441205797345,0,0,0,0,55.3778576636164,0,0,0,0,0,2.41981432097328,0.30607276163049,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,4.54289337429278,0,0,0,0,0.678923115418936,0.176512253383001,2.93774963014692,0,0,0,0.977756913674015,0,0.213452994739353,87.516608996973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.458320848023367,1.43574604915363,0.199679000498991,1.28767814440971,0.446342914883745,2.35142153703542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,2.62272940674991,0,0,0,0.714695326373367,0.662091970365432,0.25426853765475,0,0,0.326587360109409,0,0,0,0,0.732761168390412,38.4269977845442,0,0,0,0,0.106787412567695,2.04365596629566,0,0.992332043623902,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,28.0019435264208,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11038630016486,0,4.09734283307391,0,1.85656384926424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,1.1796972334774,1.10057159113007,26.4553775484275,0,0,0,0.526472298444801,0,0,18.595375308181,0,1.03499260351932,0,0,0,0,0,0,4.96211178389294,0,0,0,0,0,0,8.78153464610124,0,0.685952037749674,0,0,0,0,0.549451649953598,0,2.80272163313789,4.56579360254748,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0,0,1.69354820076372,3.6657098967048,0,0,0,0,0,7.12171720906684,8.41835016221226,41.7533195281752,14.5713297917742,0,0,0,0,0,0,0,2.40415516554353,0,0.245148321753905,0.235676547101626,0,0,2.5359343655004,0,0.0939839179798536,1.67590508731301,0,0.357107877211315,0,0,1.46067277649303,0.917458566809082,0,0.946629373159108,0,0.43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| ||
|short_description=p8@H19 | |short_description=p8@H19 | ||
}} | }} |
Latest revision as of 06:45, 17 September 2015
Short description: | p8@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -50bp_to_ENST00000417089_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.59e-16 | 19 |
cell of skeletal muscle | 2.34e-09 | 9 |
placental epithelial cell | 9.84e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.75e-20 | 14 |
membranous layer | 2.75e-20 | 14 |
extraembryonic structure | 9.00e-16 | 24 |
larynx | 2.53e-15 | 9 |
chorion | 5.50e-13 | 7 |
upper respiratory tract | 2.66e-11 | 19 |
amnion | 3.84e-09 | 7 |
organ component layer | 9.00e-09 | 66 |
omentum | 1.71e-08 | 6 |
peritoneum | 1.71e-08 | 6 |
abdominal cavity | 1.71e-08 | 6 |
visceral peritoneum | 1.71e-08 | 6 |
placenta | 3.79e-08 | 4 |
allantois | 3.79e-08 | 4 |
trunk | 6.02e-08 | 199 |
somatic layer of lateral plate mesoderm | 7.31e-08 | 8 |
foregut | 1.22e-07 | 87 |
trunk mesenchyme | 2.39e-07 | 122 |
mesenchyme | 2.80e-07 | 160 |
entire embryonic mesenchyme | 2.80e-07 | 160 |
endoderm-derived structure | 4.24e-07 | 160 |
endoderm | 4.24e-07 | 160 |
presumptive endoderm | 4.24e-07 | 160 |
subdivision of digestive tract | 8.54e-07 | 118 |