FFCP PHASE1:Hg19::chr11:33891541..33891551,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4005 | |EntrezGene=4005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6642 | |HGNC=6642 | ||
|TSSclassifier=strong | |||
|UniProt=P25791 | |UniProt=P25791 | ||
|association_with_transcript=-32bp_to_NM_001142315,uc010rel.1_5end | |association_with_transcript=-32bp_to_NM_001142315,uc010rel.1_5end | ||
|cluster_id=chr11:33891541..33891551,- | |||
|description=CAGE_peak_10_at_LMO2_5end | |description=CAGE_peak_10_at_LMO2_5end | ||
|id=chr11:33891541..33891551,- | |id=chr11:33891541..33891551,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;7.05e-34;1!CL:0002589;1.07e-17;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,7.06e-34,1;CL:0002589,9.07e-18,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.58e-34;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;2.66e-14;10!DOID:3095;4.94e-07;22!DOID:2994;4.94e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.49e-14,10;DOID:3095,4.79e-07,22;DOID:2994,4.79e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.27e-16!115;UBERON:0002346!4.87e-08!90;UBERON:0005743!1.28e-07!86;UBERON:0001049!1.49e-07!57;UBERON:0005068!1.49e-07!57;UBERON:0006241!1.49e-07!57;UBERON:0007135!1.49e-07!57;UBERON:0001017!1.89e-07!82;UBERON:0002616!2.96e-07!59;UBERON:0002308!3.36e-07!9;UBERON:0000125!3.36e-07!9;UBERON:0000073!3.88e-07!94;UBERON:0001016!3.88e-07!94;UBERON:0003075!6.86e-07!86;UBERON:0007284!6.86e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!1.27e-16!115;UBERON:0002346!4.87e-08!90;UBERON:0005743!1.28e-07!86;UBERON:0001049!1.49e-07!57;UBERON:0005068!1.49e-07!57;UBERON:0006241!1.49e-07!57;UBERON:0007135!1.49e-07!57;UBERON:0001017!1.89e-07!82;UBERON:0002616!2.96e-07!59;UBERON:0002308!3.36e-07!9;UBERON:0000125!3.36e-07!9;UBERON:0000073!3.88e-07!94;UBERON:0001016!3.88e-07!94;UBERON:0003075!6.86e-07!86;UBERON:0007284!6.86e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;5.06e-34;4!UBERON:0000923;5.06e-34;4!UBERON:0010316;5.06e-34;4!UBERON:0005291;5.06e-34;4!UBERON:0002050;1.82e-27;5!UBERON:0005423;1.82e-27;5!UBERON:0000078;1.07e-17;2!UBERON:0002012;1.07e-17;2!UBERON:0001529;1.07e-17;2!UBERON:0007204;1.07e-17;2!UBERON:0008886;1.07e-17;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,9.07e-18,2;UBERON:0007204,9.07e-18,2;UBERON:0000078,1.07e-17,2;UBERON:0007497,1.07e-17,2;UBERON:0003643,1.07e-17,2;UBERON:0003504,1.07e-17,2;UBERON:0003469,1.07e-17,2;UBERON:0003496,1.07e-17,2;UBERON:0002012,1.07e-17,2;UBERON:0008886,1.07e-17,2;UBERON:0007303,1.07e-17,2;UBERON:0002061,1.07e-17,2;UBERON:0005432,1.07e-17,2;UBERON:0004363,1.07e-17,2;UBERON:0004145,2.89e-12,3;UBERON:0003498,7.01e-08,5;UBERON:0005985,7.01e-08,5;UBERON:0010188,8.97e-07,6;UBERON:0002539,8.97e-07,6;UBERON:0003351,8.97e-07,6;UBERON:0008816,8.97e-07,6 | |||
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| ||
|short_description=p10@LMO2 | |short_description=p10@LMO2 | ||
}} | }} |
Latest revision as of 17:08, 17 September 2015
Short description: | p10@LMO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LMO2_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_NM_001142315, uc010rel.1_5end |
EntrezGene: | LMO2 |
HGNC: | 6642 |
UniProt: | P25791 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 7.06e-34 | 1 |
smooth muscle cell of the brachiocephalic vasculature | 9.07e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 9.07e-18 | 2 |
brachiocephalic vasculature | 9.07e-18 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.07e-17 | 2 |
developing epithelial placode | 1.07e-17 | 2 |
respiratory system arterial blood vessel | 1.07e-17 | 2 |
respiratory system blood vessel | 1.07e-17 | 2 |
respiratory system artery | 1.07e-17 | 2 |
head blood vessel | 1.07e-17 | 2 |
pulmonary artery | 1.07e-17 | 2 |
pulmonary vascular system | 1.07e-17 | 2 |
pharyngeal vasculature | 1.07e-17 | 2 |
truncus arteriosus | 1.07e-17 | 2 |
aortic sac | 1.07e-17 | 2 |
pharyngeal arch artery | 1.07e-17 | 2 |
outflow tract | 2.89e-12 | 3 |
heart blood vessel | 7.01e-08 | 5 |
coronary vessel | 7.01e-08 | 5 |
protuberance | 8.97e-07 | 6 |
pharyngeal arch | 8.97e-07 | 6 |
pharyngeal epithelium | 8.97e-07 | 6 |
embryonic head | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.49e-14 | 10 |
germ cell and embryonal cancer | 4.79e-07 | 22 |
germ cell cancer | 4.79e-07 | 22 |