FFCP PHASE1:Hg19::chr11:65668237..65668252,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:65668237..65668252,+ | |||
|description=CAGE_peak_at_chr11:65668237..65668252,+ | |description=CAGE_peak_at_chr11:65668237..65668252,+ | ||
|id=chr11:65668237..65668252,+ | |id=chr11:65668237..65668252,+ | ||
|ontology_enrichment_celltype=CL:0000082!2.22e-09!19;CL:0001014!9.56e-08!2;CL:0001016!9.56e-08!2;CL:0002327!3.14e-07!4;CL:0000066!4.33e-07!254 | |ontology_enrichment_celltype=CL:0000082!2.22e-09!19;CL:0001014!9.56e-08!2;CL:0001016!9.56e-08!2;CL:0002327!3.14e-07!4;CL:0000066!4.33e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.15e-15;2!CL:0001016;1.15e-15;2!CL:0000771;2.05e-15;2!CL:0000322;9.90e-11;3!CL:0000453;4.79e-07;5!CL:0000082;6.01e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.15e-15,2;CL:0001016,1.15e-15,2;CL:0000771,2.05e-15,2;CL:0000322,8.17e-11,3;CL:0000453,4.79e-07,5;CL:0000082,5.66e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0009847;9.90e-11;3!UBERON:0003353;9.90e-11;3!UBERON:0001041;3.27e-09;30 | |||
|ontology_enrichment_disease=DOID:305!1.40e-12!106;DOID:3908!2.18e-10!5;DOID:1749!1.12e-09!14;DOID:0050687!2.29e-09!143;DOID:1324!2.42e-09!15;DOID:0050615!1.09e-08!16;DOID:3905!2.30e-08!9;DOID:3910!8.13e-08!2;DOID:3493!2.63e-07!2 | |ontology_enrichment_disease=DOID:305!1.40e-12!106;DOID:3908!2.18e-10!5;DOID:1749!1.12e-09!14;DOID:0050687!2.29e-09!143;DOID:1324!2.42e-09!15;DOID:0050615!1.09e-08!16;DOID:3905!2.30e-08!9;DOID:3910!8.13e-08!2;DOID:3493!2.63e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3910;2.05e-15;2!DOID:1324;1.47e-08;15!DOID:0050615;4.42e-08;16!DOID:3908;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.54e-15,2;DOID:1324,1.37e-08,15;DOID:0050615,4.11e-08,16;DOID:3908,5.38e-07,5;DOID:305,5.64e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0005153!4.11e-13!37;UBERON:0004802!2.22e-09!19;UBERON:0000115!2.22e-09!19;UBERON:0005157!1.30e-08!51;UBERON:0002048!6.62e-08!22;UBERON:0000117!6.62e-08!22;UBERON:0000171!6.62e-08!22;UBERON:0000170!6.62e-08!22;UBERON:0005597!6.62e-08!22;UBERON:0000118!6.62e-08!22;UBERON:0004903!8.13e-08!2;UBERON:0002173!8.13e-08!2;UBERON:0002186!8.13e-08!2;UBERON:0004807!1.87e-07!28;UBERON:0001911!3.14e-07!4;UBERON:0005333!3.14e-07!4;UBERON:0008425!3.14e-07!4;UBERON:0005311!3.14e-07!4;UBERON:0005911!7.81e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.05e-15;2!UBERON:0002173;2.05e-15;2!UBERON:0002186;2.05e-15;2!UBERON:0000058;2.81e-12;10!UBERON:0004821;9.90e-11;3!UBERON:0007499;9.90e-11;3!UBERON:0003215;9.90e-11;3!UBERON:0010368;9.90e-11;3!UBERON:0009911;9.90e-11;3!UBERON:0002299;9.90e-11;3!UBERON:0006524;9.90e-11;3!UBERON:0008874;9.90e-11;3!UBERON:0002169;9.90e-11;3!UBERON:0004894;9.90e-11;3!UBERON:0002394;2.26e-08;4!UBERON:0003928;2.26e-08;4!UBERON:0009856;2.26e-08;4!UBERON:0004802;6.01e-07;19!UBERON:0000115;6.01e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.54e-15,2;UBERON:0002173,1.54e-15,2;UBERON:0002186,1.54e-15,2;UBERON:0004821,8.17e-11,3;UBERON:0003215,8.17e-11,3;UBERON:0010368,8.17e-11,3;UBERON:0009911,8.17e-11,3;UBERON:0002299,8.17e-11,3;UBERON:0006524,8.17e-11,3;UBERON:0008874,8.17e-11,3;UBERON:0002169,8.17e-11,3;UBERON:0004894,8.17e-11,3;UBERON:0005153,1.33e-07,37;UBERON:0004802,5.66e-07,19;UBERON:0000115,5.66e-07,19;UBERON:0000058,6.01e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,1.43789361835723,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0.661983911750998,0.313932918407225,0,0,0,0,0.0979923974143777,0.435296032902013,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,1.1524383839052,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,3.0952078182318,0,0.335434687599266,0,0,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18193840883968,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0.687051635306701,0.243835849964539,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,2.08627553391837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0.342233301085281,0,0,0,0,0.960546112899439,0,0.449126010532934,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,1.43789361835723,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0.661983911750998,0.313932918407225,0,0,0,0,0.0979923974143777,0.435296032902013,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,1.1524383839052,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,3.0952078182318,0,0.335434687599266,0,0,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18193840883968,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0.687051635306701,0.243835849964539,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,2.08627553391837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0.342233301085281,0,0,0,0,0.960546112899439,0,0.449126010532934,0,0,0,0,0,0 | ||
|short_description=p@chr11:65668237..65668252,+ | |short_description=p@chr11:65668237..65668252,+ | ||
}} | }} |
Latest revision as of 00:52, 24 July 2015
Short description: | p@chr11:65668237..65668252, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65668237..65668252, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.15e-15 | 2 |
immature CD1a-positive Langerhans cell | 1.15e-15 | 2 |
eosinophil | 2.05e-15 | 2 |
pneumocyte | 8.17e-11 | 3 |
Langerhans cell | 4.79e-07 | 5 |
epithelial cell of lung | 5.66e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.54e-15 | 2 |
alveolar duct | 1.54e-15 | 2 |
bronchiole | 1.54e-15 | 2 |
pulmonary alveolus epithelium | 8.17e-11 | 3 |
alveolus | 8.17e-11 | 3 |
pulmonary lobule | 8.17e-11 | 3 |
lobule | 8.17e-11 | 3 |
alveolus of lung | 8.17e-11 | 3 |
alveolar system | 8.17e-11 | 3 |
pulmonary acinus | 8.17e-11 | 3 |
alveolar sac | 8.17e-11 | 3 |
alveolar wall | 8.17e-11 | 3 |
epithelial bud | 1.33e-07 | 37 |
respiratory tract epithelium | 5.66e-07 | 19 |
lung epithelium | 5.66e-07 | 19 |
duct | 6.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.54e-15 | 2 |
lung cancer | 1.37e-08 | 15 |
respiratory system cancer | 4.11e-08 | 16 |
non-small cell lung carcinoma | 5.38e-07 | 5 |
carcinoma | 5.64e-07 | 106 |