FFCP PHASE1:Hg19::chr11:65779257..65779267,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1474 | |EntrezGene=1474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2478 | |HGNC=2478 | ||
|TSSclassifier=strong | |||
|UniProt=Q15828 | |UniProt=Q15828 | ||
|association_with_transcript=-44bp_to_ENST00000312134_5end | |association_with_transcript=-44bp_to_ENST00000312134_5end | ||
|cluster_id=chr11:65779257..65779267,+ | |||
|coexpression_cluster_id=C1349 | |||
|description=CAGE_peak_6_at_CST6_5end | |description=CAGE_peak_6_at_CST6_5end | ||
|id=chr11:65779257..65779267,+ | |id=chr11:65779257..65779267,+ | ||
|ontology_enrichment_celltype=CL:0002541!1.55e-11!3;CL:0000239!1.44e-10!3;CL:1000615!1.44e-10!3;CL:0002306!1.44e-10!3;CL:1000507!3.56e-09!12;CL:1000494!3.56e-09!12;CL:1000449!3.67e-09!16;CL:0002681!9.54e-09!13;CL:0002584!9.54e-09!13;CL:1000497!5.02e-08!18;CL:0002518!5.02e-08!18;CL:0002537!5.80e-07!5;CL:0000066!5.86e-07!254 | |ontology_enrichment_celltype=CL:0002541!1.55e-11!3;CL:0000239!1.44e-10!3;CL:1000615!1.44e-10!3;CL:0002306!1.44e-10!3;CL:1000507!3.56e-09!12;CL:1000494!3.56e-09!12;CL:1000449!3.67e-09!16;CL:0002681!9.54e-09!13;CL:0002584!9.54e-09!13;CL:1000497!5.02e-08!18;CL:0002518!5.02e-08!18;CL:0002537!5.80e-07!5;CL:0000066!5.86e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.87e-50;3!CL:0000349;6.35e-22;19!CL:0002537;2.75e-14;5!CL:0000322;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.89e-50,3;CL:0000349,5.45e-22,19;CL:0002537,2.58e-14,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4468!7.82e-08!2 | |ontology_enrichment_disease=DOID:4468!7.82e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:3111;1.12e-17;1!DOID:3603;1.12e-17;1!DOID:4929;1.07e-09;2!DOID:3910;1.64e-09;2!DOID:4468;1.64e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.03e-17,1;DOID:3603,1.03e-17,1;DOID:4929,1.03e-09,2;DOID:4468,1.86e-09,2;DOID:3910,2.02e-09,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003124;2.87e-50;3!UBERON:0000920;2.87e-50;3!UBERON:0005631;1.92e-41;10!UBERON:0000158;1.92e-41;10!UBERON:0004913;4.83e-18;1!UBERON:0003703;4.83e-18;1!UBERON:0001174;4.83e-18;1!UBERON:0004914;4.83e-18;1!UBERON:0002394;1.28e-17;4!UBERON:0003928;1.28e-17;4!UBERON:0000478;2.18e-17;24!UBERON:0000058;1.57e-15;10!UBERON:0002294;1.72e-10;7!UBERON:0001173;1.72e-10;7!UBERON:0000305;1.77e-10;7!UBERON:0004903;1.64e-09;2!UBERON:0002173;1.64e-09;2!UBERON:0002186;1.64e-09;2!UBERON:0002114;7.08e-07;2!UBERON:0004821;9.37e-07;3!UBERON:0007499;9.37e-07;3!UBERON:0003215;9.37e-07;3!UBERON:0010368;9.37e-07;3!UBERON:0009911;9.37e-07;3!UBERON:0002299;9.37e-07;3!UBERON:0006524;9.37e-07;3!UBERON:0008874;9.37e-07;3!UBERON:0002169;9.37e-07;3!UBERON:0004894;9.37e-07;3 | |||
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| ||
|short_description=p6@CST6 | |short_description=p6@CST6 | ||
}} | }} |
Latest revision as of 12:50, 19 September 2015
Short description: | p6@CST6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CST6_5end |
Coexpression cluster: | C1349_Alveolar_bile_chorionic_clear_amniotic_papillotubular_serous |
Association with transcript: | -44bp_to_ENST00000312134_5end |
EntrezGene: | CST6 |
HGNC: | 2478 |
UniProt: | Q15828 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.89e-50 | 3 |
extraembryonic cell | 5.45e-22 | 19 |
amnion mesenchymal stem cell | 2.58e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.89e-50 | 3 |
extraembryonic membrane | 9.03e-30 | 14 |
membranous layer | 9.03e-30 | 14 |
chorion | 4.28e-22 | 7 |
hepatopancreatic ampulla | 4.44e-18 | 1 |
extrahepatic bile duct | 4.44e-18 | 1 |
common bile duct | 4.44e-18 | 1 |
duodenal papilla | 4.44e-18 | 1 |
extraembryonic structure | 1.93e-17 | 24 |
duct | 2.72e-14 | 19 |
bile duct | 4.30e-12 | 6 |
digestive system duct | 4.30e-12 | 6 |
amnion | 1.68e-10 | 7 |
bronchoalveolar duct junction | 2.02e-09 | 2 |
alveolar duct | 2.02e-09 | 2 |
bronchiole | 2.02e-09 | 2 |
somatic layer of lateral plate mesoderm | 2.66e-09 | 8 |
organ component layer | 6.85e-09 | 66 |
biliary system | 2.29e-08 | 9 |
biliary tree | 2.29e-08 | 9 |
biliary bud | 2.29e-08 | 9 |
duodenum | 6.88e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.03e-17 | 1 |
mucinous cystadenocarcinoma | 1.03e-17 | 1 |
tubular adenocarcinoma | 1.03e-09 | 2 |
clear cell adenocarcinoma | 1.86e-09 | 2 |
lung adenocarcinoma | 2.02e-09 | 2 |