FFCP PHASE1:Hg19::chr16:7382818..7382819,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54715 | |EntrezGene=54715 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18222 | |HGNC=18222 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NWB1,F8WAC5 | |UniProt=Q9NWB1,F8WAC5 | ||
|association_with_transcript=67bp_to_ENST00000311745,ENST00000340209,ENST00000352951,ENST00000355637,ENST00000436368,NM_145891,NM_145892,NM_145893,uc002cyw.2,uc002cyx.2,uc002cyy.2,uc010uyc.1_5end | |association_with_transcript=67bp_to_ENST00000311745,ENST00000340209,ENST00000352951,ENST00000355637,ENST00000436368,NM_145891,NM_145892,NM_145893,uc002cyw.2,uc002cyx.2,uc002cyy.2,uc010uyc.1_5end | ||
|cluster_id=chr16:7382818..7382819,+ | |||
|coexpression_cluster_id=C1425 | |||
|description=CAGE_peak_40_at_RBFOX1_5end | |description=CAGE_peak_40_at_RBFOX1_5end | ||
|id=chr16:7382818..7382819,+ | |id=chr16:7382818..7382819,+ | ||
|ontology_enrichment_celltype=CL:0000188!5.78e-14!9 | |ontology_enrichment_celltype=CL:0000188!5.78e-14!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;7.48e-30;1!UBERON:0004140;3.16e-29;1 | |||
|ontology_enrichment_disease=DOID:114!1.49e-17!2;DOID:178!1.43e-09!1;DOID:326!1.43e-09!1;DOID:3978!1.43e-09!1;DOID:3394!1.43e-09!1;DOID:5844!1.43e-09!1;DOID:1287!3.13e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:114;1.66e-15;2!DOID:1287;2.03e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.78e-15,2;DOID:1287,2.11e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!3.70e-18!27;UBERON:0001630!1.62e-17!2;UBERON:0005090!1.62e-17!2;UBERON:0000341!2.65e-17!2;UBERON:0007023!4.77e-15!115;UBERON:0004151!1.16e-11!3;UBERON:0003978!1.51e-11!3;UBERON:0009751!1.51e-11!3;UBERON:0000946!1.51e-11!3;UBERON:0002523!1.51e-11!3;UBERON:0005983!1.51e-11!3;UBERON:0002165!1.51e-11!3;UBERON:0002062!1.51e-11!3;UBERON:0007280!1.51e-11!3;UBERON:0005418!8.68e-10!1;UBERON:0001389!8.68e-10!1;UBERON:0000026!8.68e-10!1;UBERON:0008784!8.68e-10!1;UBERON:0006058!8.68e-10!1;UBERON:0003663!8.68e-10!1;UBERON:0001383!8.68e-10!1;UBERON:0004256!8.68e-10!1;UBERON:0002529!8.68e-10!1;UBERON:0004708!8.68e-10!1;UBERON:0002101!8.68e-10!1;UBERON:0004709!8.68e-10!1;UBERON:0003661!8.68e-10!1;UBERON:0002471!8.68e-10!1;UBERON:0004357!8.68e-10!1;UBERON:0009872!8.68e-10!1;UBERON:0004347!8.68e-10!1;UBERON:0005420!8.68e-10!1;UBERON:0005732!8.68e-10!1;UBERON:0006057!8.68e-10!1;UBERON:0000978!8.68e-10!1;UBERON:0002103!8.68e-10!1;UBERON:0001665!8.68e-10!1;UBERON:0003823!8.68e-10!1;UBERON:0000154!8.68e-10!1;UBERON:0005733!8.68e-10!1;UBERON:0005730!8.68e-10!1;UBERON:0000989!1.56e-09!1;UBERON:0008811!1.56e-09!1;UBERON:0006258!1.56e-09!1;UBERON:0005876!1.56e-09!1;UBERON:0004874!1.56e-09!1;UBERON:0002426!1.84e-09!1;UBERON:0003831!1.84e-09!1;UBERON:0003898!1.84e-09!1;UBERON:0004830!1.84e-09!1;UBERON:0001774!1.84e-09!1;UBERON:0003830!1.84e-09!1;UBERON:0005175!1.84e-09!1;UBERON:0003897!1.84e-09!1;UBERON:0001103!1.84e-09!1;UBERON:0010084!1.84e-09!1;UBERON:0002079!1.99e-09!1;UBERON:0002146!2.35e-09!1;UBERON:0005623!2.35e-09!1;UBERON:0002084!2.55e-09!1;UBERON:0002082!2.55e-09!1;UBERON:0004706!2.55e-09!1;UBERON:0002135!3.25e-09!1;UBERON:0002372!3.83e-09!1;UBERON:0001961!3.83e-09!1;UBERON:0001744!3.83e-09!1;UBERON:0001735!3.83e-09!1;UBERON:0000948!3.22e-08!24;UBERON:0005498!3.22e-08!24;UBERON:0004140!3.22e-08!24;UBERON:0009881!3.22e-08!24;UBERON:0004141!3.22e-08!24;UBERON:0003084!3.22e-08!24;UBERON:0007005!3.22e-08!24;UBERON:0004139!3.22e-08!24;UBERON:0004291!3.22e-08!24;UBERON:0003103!3.54e-08!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;9.99e-30;1!UBERON:0000026;9.99e-30;1!UBERON:0008784;9.99e-30;1!UBERON:0006058;9.99e-30;1!UBERON:0003663;9.99e-30;1!UBERON:0004256;9.99e-30;1!UBERON:0004708;9.99e-30;1!UBERON:0002101;9.99e-30;1!UBERON:0004709;9.99e-30;1!UBERON:0002529;9.99e-30;1!UBERON:0010538;9.99e-30;1!UBERON:0003661;9.99e-30;1!UBERON:0010890;9.99e-30;1!UBERON:0002471;9.99e-30;1!UBERON:0001383;9.99e-30;1!UBERON:0010758;9.99e-30;1!UBERON:0010707;9.99e-30;1!UBERON:0000978;9.99e-30;1!UBERON:0002103;9.99e-30;1!UBERON:0001665;9.99e-30;1!UBERON:0003823;9.99e-30;1!UBERON:0000154;9.99e-30;1!UBERON:0010709;9.99e-30;1!UBERON:0005090;1.33e-15;2!UBERON:0001630;1.33e-15;2!UBERON:0000341;2.37e-15;2!UBERON:0007100;7.29e-11;25!UBERON:0001134;4.19e-08;16!UBERON:0002036;4.19e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,9.99e-30,1;UBERON:0001389,9.99e-30,1;UBERON:0000026,9.99e-30,1;UBERON:0008784,9.99e-30,1;UBERON:0006058,9.99e-30,1;UBERON:0003663,9.99e-30,1;UBERON:0004256,9.99e-30,1;UBERON:0004708,9.99e-30,1;UBERON:0002101,9.99e-30,1;UBERON:0004709,9.99e-30,1;UBERON:0002529,9.99e-30,1;UBERON:0010538,9.99e-30,1;UBERON:0003661,9.99e-30,1;UBERON:0010890,9.99e-30,1;UBERON:0002471,9.99e-30,1;UBERON:0001383,9.99e-30,1;UBERON:0004357,9.99e-30,1;UBERON:0004347,9.99e-30,1;UBERON:0005420,9.99e-30,1;UBERON:0005732,9.99e-30,1;UBERON:0010758,9.99e-30,1;UBERON:0010707,9.99e-30,1;UBERON:0000978,9.99e-30,1;UBERON:0002103,9.99e-30,1;UBERON:0001665,9.99e-30,1;UBERON:0003823,9.99e-30,1;UBERON:0000154,9.99e-30,1;UBERON:0010709,9.99e-30,1;UBERON:0005733,9.99e-30,1;UBERON:0005730,9.99e-30,1;UBERON:0005090,1.33e-15,2;UBERON:0001630,1.33e-15,2;UBERON:0000341,2.37e-15,2;UBERON:0007100,4.19e-10,27 | |||
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|short_description=p40@RBFOX1 | |short_description=p40@RBFOX1 | ||
}} | }} |
Latest revision as of 20:12, 17 September 2015
Short description: | p40@RBFOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_RBFOX1_5end |
Coexpression cluster: | C1425_umbilical_skeletal_heart_penis_left_vein_diaphragm |
Association with transcript: | 67bp_to_ENST00000311745, ENST00000340209, ENST00000352951, ENST00000355637, ENST00000436368, NM_145891, NM_145892, NM_145893, uc002cyw.2, uc002cyx.2, uc002cyy.2, uc010uyc.1_5end |
EntrezGene: | RBFOX1 |
HGNC: | 18222 |
UniProt: | Q9NWB1F8WAC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 9.99e-30 | 1 |
soleus muscle | 9.99e-30 | 1 |
appendage | 9.99e-30 | 1 |
lower limb segment | 9.99e-30 | 1 |
multi-limb segment region | 9.99e-30 | 1 |
hindlimb muscle | 9.99e-30 | 1 |
hindlimb zeugopod muscle | 9.99e-30 | 1 |
paired limb/fin | 9.99e-30 | 1 |
limb | 9.99e-30 | 1 |
pelvic appendage | 9.99e-30 | 1 |
limb segment | 9.99e-30 | 1 |
paired limb/fin segment | 9.99e-30 | 1 |
limb muscle | 9.99e-30 | 1 |
pelvic complex muscle | 9.99e-30 | 1 |
zeugopod | 9.99e-30 | 1 |
muscle of leg | 9.99e-30 | 1 |
paired limb/fin bud | 9.99e-30 | 1 |
limb bud | 9.99e-30 | 1 |
pelvic appendage bud | 9.99e-30 | 1 |
limb/fin field | 9.99e-30 | 1 |
subdivision of organism along appendicular axis | 9.99e-30 | 1 |
appendage girdle complex | 9.99e-30 | 1 |
leg | 9.99e-30 | 1 |
hindlimb | 9.99e-30 | 1 |
triceps surae | 9.99e-30 | 1 |
hindlimb zeugopod | 9.99e-30 | 1 |
posterior region of body | 9.99e-30 | 1 |
pelvic complex | 9.99e-30 | 1 |
limb field | 9.99e-30 | 1 |
hindlimb/pelvic fin field | 9.99e-30 | 1 |
muscle structure | 1.33e-15 | 2 |
muscle organ | 1.33e-15 | 2 |
throat | 2.37e-15 | 2 |
primary circulatory organ | 4.19e-10 | 27 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.78e-15 | 2 |
cardiovascular system disease | 2.11e-08 | 4 |