FFCP PHASE1:Hg19::chr10:73975657..73975739,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:73975657..73975739,-
|short_description=p2@ASCC1
|description=CAGE_peak_2_at_ASCC1_5end
|association_with_transcript=0bp_to_ENST00000394919,ENST0000052675...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51008 | |EntrezGene=51008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24268 | |HGNC=24268 | ||
|UniProt=E9PL92, | |TSSclassifier=strong | ||
|UniProt=E9PL92,E9PSA3,Q8N9N2 | |||
|association_with_transcript=0bp_to_ENST00000394919,ENST00000526751,ENST00000530431,uc001jss.1_5end | |||
|cluster_id=chr10:73975657..73975739,- | |||
|description=CAGE_peak_2_at_ASCC1_5end | |||
|id=chr10:73975657..73975739,- | |||
|ontology_enrichment_celltype=CL:0000542!5.18e-10!53;CL:0000051!5.18e-10!53;CL:0000838!9.32e-10!52;CL:0000945!4.37e-07!24;CL:0000826!4.37e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.13e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.13e-10,53;CL:0000051,5.13e-10,53;CL:0000838,9.22e-10,52;CL:0000945,4.36e-07,24;CL:0000826,4.36e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.07e-15!57;UBERON:0005068!3.07e-15!57;UBERON:0006241!3.07e-15!57;UBERON:0007135!3.07e-15!57;UBERON:0001017!3.45e-14!82;UBERON:0007023!1.41e-13!115;UBERON:0005743!1.49e-13!86;UBERON:0002616!8.72e-13!59;UBERON:0000073!7.03e-12!94;UBERON:0001016!7.03e-12!94;UBERON:0000955!1.46e-11!69;UBERON:0006238!1.46e-11!69;UBERON:0003080!1.91e-11!42;UBERON:0002780!3.06e-11!41;UBERON:0001890!3.06e-11!41;UBERON:0006240!3.06e-11!41;UBERON:0003075!2.30e-09!86;UBERON:0007284!2.30e-09!86;UBERON:0002346!2.39e-09!90;UBERON:0001893!3.14e-09!34;UBERON:0002020!5.65e-09!34;UBERON:0003528!5.65e-09!34;UBERON:0002791!5.87e-09!33;UBERON:0000153!9.19e-09!129;UBERON:0007811!9.19e-09!129;UBERON:0001869!2.08e-08!32;UBERON:0000924!2.60e-08!173;UBERON:0006601!2.60e-08!173;UBERON:0004121!3.19e-08!169;UBERON:0000033!5.61e-08!123;UBERON:0002619!3.79e-07!22;UBERON:0003056!9.77e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.78e-09;53!UBERON:0002616;4.78e-09;53!UBERON:0002780;2.04e-08;41!UBERON:0001890;2.04e-08;41!UBERON:0001893;5.11e-08;34!UBERON:0002791;8.22e-08;32!UBERON:0003528;9.93e-08;34!UBERON:0002020;9.93e-08;34!UBERON:0001869;1.12e-07;32!UBERON:0002619;3.01e-07;22!UBERON:0001950;8.43e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.96e-15,56;UBERON:0005068,4.96e-15,56;UBERON:0006241,4.96e-15,56;UBERON:0007135,4.96e-15,56;UBERON:0000073,3.49e-14,53;UBERON:0002616,3.49e-14,53;UBERON:0001017,5.62e-14,81;UBERON:0007023,1.78e-13,114;UBERON:0001016,3.54e-12,89;UBERON:0000955,2.34e-11,68;UBERON:0006238,2.34e-11,68;UBERON:0002780,3.05e-11,41;UBERON:0001890,3.05e-11,41;UBERON:0003080,3.05e-11,41;UBERON:0006240,3.05e-11,41;UBERON:0011216,1.24e-09,223;UBERON:0001893,3.13e-09,34;UBERON:0003528,5.64e-09,34;UBERON:0002020,5.64e-09,34;UBERON:0002791,1.53e-08,32;UBERON:0001869,2.08e-08,32;UBERON:0003075,2.53e-08,82;UBERON:0007284,2.53e-08,82;UBERON:0002346,2.57e-08,86;UBERON:0004121,9.34e-08,171;UBERON:0000924,9.34e-08,171;UBERON:0006601,9.34e-08,171;UBERON:0002619,3.78e-07,22;UBERON:0010371,5.72e-07,104;UBERON:0003056,6.14e-07,61 | |||
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| ||
|short_description=p2@ASCC1 | |||
}} | }} |
Latest revision as of 05:18, 19 September 2015
Short description: | p2@ASCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ASCC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000394919, ENST00000526751, ENST00000530431, uc001jss.1_5end |
EntrezGene: | ASCC1 |
HGNC: | 24268 |
UniProt: | E9PL92E9PSA3Q8N9N2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.13e-10 | 53 |
common lymphoid progenitor | 5.13e-10 | 53 |
lymphoid lineage restricted progenitor cell | 9.22e-10 | 52 |
lymphocyte of B lineage | 4.36e-07 | 24 |
pro-B cell | 4.36e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
neural tube | 4.96e-15 | 56 |
neural rod | 4.96e-15 | 56 |
future spinal cord | 4.96e-15 | 56 |
neural keel | 4.96e-15 | 56 |
regional part of nervous system | 3.49e-14 | 53 |
regional part of brain | 3.49e-14 | 53 |
central nervous system | 5.62e-14 | 81 |
adult organism | 1.78e-13 | 114 |
nervous system | 3.54e-12 | 89 |
brain | 2.34e-11 | 68 |
future brain | 2.34e-11 | 68 |
regional part of forebrain | 3.05e-11 | 41 |
forebrain | 3.05e-11 | 41 |
anterior neural tube | 3.05e-11 | 41 |
future forebrain | 3.05e-11 | 41 |
organ system subdivision | 1.24e-09 | 223 |
telencephalon | 3.13e-09 | 34 |
brain grey matter | 5.64e-09 | 34 |
gray matter | 5.64e-09 | 34 |
regional part of telencephalon | 1.53e-08 | 32 |
cerebral hemisphere | 2.08e-08 | 32 |
neural plate | 2.53e-08 | 82 |
presumptive neural plate | 2.53e-08 | 82 |
neurectoderm | 2.57e-08 | 86 |
ectoderm-derived structure | 9.34e-08 | 171 |
ectoderm | 9.34e-08 | 171 |
presumptive ectoderm | 9.34e-08 | 171 |
regional part of cerebral cortex | 3.78e-07 | 22 |
ecto-epithelium | 5.72e-07 | 104 |
pre-chordal neural plate | 6.14e-07 | 61 |