FFCP PHASE1:Hg19::chr12:13066116..13066151,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:13066116..13066151,+ | |||
|description=CAGE_peak_at_chr12:13066116..13066151,+ | |description=CAGE_peak_at_chr12:13066116..13066151,+ | ||
|id=chr12:13066116..13066151,+ | |id=chr12:13066116..13066151,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.23e-24!254;CL:0000077!1.45e-11!19;CL:0002076!9.37e-07!43 | |ontology_enrichment_celltype=CL:0000066!3.23e-24!254;CL:0000077!1.45e-11!19;CL:0002076!9.37e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.81e-17;19!CL:0002595;4.34e-08;5!CL:1000507;6.31e-07;10!CL:1000494;6.31e-07;10!CL:0000349;9.12e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.98e-19,253;CL:0000077,2.93e-17,19;CL:0000076,4.43e-08,63;CL:0002595,8.11e-08,5;CL:0000349,6.00e-07,19;CL:1000507,6.44e-07,10;CL:1000494,6.44e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.33e-08;29 | |||
|ontology_enrichment_disease=DOID:305!1.30e-13!106;DOID:0050687!1.11e-09!143 | |ontology_enrichment_disease=DOID:305!1.30e-13!106;DOID:0050687!1.11e-09!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.78e-13,106;DOID:0050687,3.24e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.85e-12!169;UBERON:0000925!1.85e-12!169;UBERON:0006595!1.85e-12!169;UBERON:0003104!4.66e-11!238;UBERON:0009142!4.66e-11!238;UBERON:0006554!4.73e-11!44;UBERON:0003064!1.34e-10!37;UBERON:0001008!1.67e-10!45;UBERON:0001007!1.40e-09!155;UBERON:0001555!1.40e-09!155;UBERON:0007026!1.40e-09!155;UBERON:0002100!7.73e-09!216;UBERON:0005156!1.54e-08!59;UBERON:0000990!1.54e-08!59;UBERON:0003101!2.69e-08!22;UBERON:0000079!2.69e-08!22;UBERON:0000481!3.38e-08!347;UBERON:0004921!3.41e-08!129;UBERON:0004185!3.41e-08!129;UBERON:0004122!3.49e-08!15;UBERON:0002367!7.55e-08!11;UBERON:0010147!7.55e-08!11;UBERON:0009846!7.55e-08!11;UBERON:0003353!7.55e-08!11;UBERON:0004902!7.55e-08!11;UBERON:0003820!7.55e-08!11;UBERON:0009847!7.55e-08!11;UBERON:0000077!8.76e-08!130;UBERON:0005153!9.69e-08!37;UBERON:0005911!1.38e-07!82;UBERON:0000162!2.03e-07!14;UBERON:0001353!2.03e-07!14;UBERON:0000163!2.03e-07!14;UBERON:0006866!2.03e-07!14;UBERON:0000164!2.03e-07!14;UBERON:0000931!2.03e-07!14;UBERON:0000065!4.11e-07!53;UBERON:0003937!8.20e-07!12;UBERON:0005399!8.20e-07!12;UBERON:0000464!8.33e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.55e-11;9!UBERON:0001557;1.55e-11;9!UBERON:0002367;2.15e-11;11!UBERON:0010147;2.15e-11;11!UBERON:0003937;2.95e-10;12!UBERON:0005399;2.95e-10;12!UBERON:0003101;6.50e-10;22!UBERON:0000079;6.50e-10;22!UBERON:0003834;4.34e-08;5!UBERON:0001533;4.34e-08;5!UBERON:0005631;9.55e-08;10!UBERON:0000158;9.55e-08;10!UBERON:0004211;6.31e-07;10!UBERON:0009773;6.31e-07;10!UBERON:0001231;6.31e-07;10!UBERON:0004810;6.31e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004122,6.87e-12,15;UBERON:0002367,1.22e-11,11;UBERON:0010147,1.22e-11,11;UBERON:0009846,1.22e-11,11;UBERON:0003353,1.22e-11,11;UBERON:0004902,1.22e-11,11;UBERON:0003820,1.22e-11,11;UBERON:0009847,1.22e-11,11;UBERON:0001737,2.95e-11,9;UBERON:0006554,8.26e-11,47;UBERON:0003937,1.77e-10,12;UBERON:0005399,1.77e-10,12;UBERON:0001008,1.87e-10,48;UBERON:0000162,1.94e-10,14;UBERON:0001353,1.94e-10,14;UBERON:0000163,1.94e-10,14;UBERON:0006866,1.94e-10,14;UBERON:0000164,1.94e-10,14;UBERON:0000931,1.94e-10,14;UBERON:0003101,4.55e-10,22;UBERON:0000079,4.55e-10,22;UBERON:0004119,9.32e-10,160;UBERON:0000925,9.32e-10,160;UBERON:0006595,9.32e-10,160;UBERON:0003064,1.71e-09,28;UBERON:0004921,1.49e-08,118;UBERON:0005631,3.02e-08,14;UBERON:0000158,3.02e-08,14;UBERON:0001007,5.75e-08,145;UBERON:0001555,5.75e-08,145;UBERON:0007026,5.75e-08,145;UBERON:0003834,8.11e-08,5;UBERON:0001533,8.11e-08,5;UBERON:0008947,2.45e-07,38;UBERON:0003258,2.45e-07,38;UBERON:0005156,2.90e-07,59;UBERON:0000990,2.90e-07,59;UBERON:0001046,4.85e-07,19;UBERON:0004810,6.44e-07,10;UBERON:0005153,6.66e-07,37;UBERON:0001557,8.61e-07,19 | |||
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| ||
|short_description=p@chr12:13066116..13066151,+ | |short_description=p@chr12:13066116..13066151,+ | ||
}} | }} |
Latest revision as of 06:44, 24 July 2015
Short description: | p@chr12:13066116..13066151, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:13066116..13066151, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.98e-19 | 253 |
mesothelial cell | 2.93e-17 | 19 |
squamous epithelial cell | 4.43e-08 | 63 |
smooth muscle cell of the subclavian artery | 8.11e-08 | 5 |
extraembryonic cell | 6.00e-07 | 19 |
kidney tubule cell | 6.44e-07 | 10 |
nephron tubule epithelial cell | 6.44e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.78e-13 | 106 |
cell type cancer | 3.24e-09 | 143 |