FFCP PHASE1:Hg19::chr12:41374749..41374779,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:41374749..41374779,+ | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr12:41374749..41374779,+ | |description=CAGE_peak_at_chr12:41374749..41374779,+ | ||
|id=chr12:41374749..41374779,+ | |id=chr12:41374749..41374779,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.81e-07!25;CL:0002166!6.35e-07!3 | |ontology_enrichment_celltype=CL:0002319!1.81e-07!25;CL:0002166!6.35e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000047;7.30e-15;2!CL:0002605;1.31e-10;3!CL:0002166;2.53e-10;3!CL:0002579;3.84e-10;3!CL:0000128;6.40e-10;7!CL:0000126;6.40e-10;7!CL:0000127;6.40e-10;7!CL:0002621;6.81e-10;3!CL:0002319;5.50e-09;25!CL:0000511;1.13e-08;1!CL:0002625;1.13e-08;1!CL:0000216;1.13e-08;1!CL:0002568;4.89e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.22e-10,3;CL:0002166,2.59e-10,3;CL:0002579,3.27e-10,3;CL:0000128,6.12e-10,7;CL:0000126,6.12e-10,7;CL:0000127,6.12e-10,7;CL:0002453,6.12e-10,7;CL:0002621,7.46e-10,3;CL:0002319,5.38e-09,25;CL:0000511,1.13e-08,1;CL:0002625,1.13e-08,1;CL:0000216,1.13e-08,1;CL:0000047,2.09e-08,8;CL:0002568,3.57e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;3.53e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.77e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.11e-18!82;UBERON:0005743!2.45e-17!86;UBERON:0001049!5.46e-16!57;UBERON:0005068!5.46e-16!57;UBERON:0006241!5.46e-16!57;UBERON:0007135!5.46e-16!57;UBERON:0000073!9.08e-16!94;UBERON:0001016!9.08e-16!94;UBERON:0000955!3.62e-15!69;UBERON:0006238!3.62e-15!69;UBERON:0002616!6.81e-14!59;UBERON:0001869!1.04e-13!32;UBERON:0002020!9.85e-13!34;UBERON:0003528!9.85e-13!34;UBERON:0001893!1.26e-12!34;UBERON:0002780!3.43e-12!41;UBERON:0001890!3.43e-12!41;UBERON:0006240!3.43e-12!41;UBERON:0003080!8.91e-12!42;UBERON:0000475!9.25e-12!365;UBERON:0002791!9.90e-12!33;UBERON:0000033!1.21e-11!123;UBERON:0000153!2.61e-11!129;UBERON:0007811!2.61e-11!129;UBERON:0000956!3.31e-11!25;UBERON:0000203!3.31e-11!25;UBERON:0003075!7.20e-10!86;UBERON:0007284!7.20e-10!86;UBERON:0000025!1.60e-09!194;UBERON:0002619!3.44e-09!22;UBERON:0002346!4.27e-09!90;UBERON:0000349!6.62e-09!5;UBERON:0004121!1.22e-08!169;UBERON:0003056!2.28e-08!61;UBERON:0000924!3.39e-08!173;UBERON:0006601!3.39e-08!173;UBERON:0000483!4.70e-08!309;UBERON:0004111!6.49e-08!241;UBERON:0000119!7.88e-08!312;UBERON:0001950!4.20e-07!20;UBERON:0001871!4.39e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.81e-10;3!UBERON:0000992;8.43e-09;13!UBERON:0001136;1.13e-08;1!UBERON:0001343;1.13e-08;1!UBERON:0004910;1.13e-08;1!UBERON:0004813;1.13e-08;1!UBERON:0000991;3.14e-08;21!UBERON:0001708;5.94e-08;4!UBERON:0008895;5.94e-08;4!UBERON:0002119;7.18e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,7.46e-10,3;UBERON:0000992,9.07e-09,13;UBERON:0001136,1.13e-08,1;UBERON:0001343,1.13e-08,1;UBERON:0004910,1.13e-08,1;UBERON:0005154,1.13e-08,1;UBERON:0005295,1.13e-08,1;UBERON:0004813,1.13e-08,1;UBERON:0005297,1.13e-08,1;UBERON:0005294,1.13e-08,1;UBERON:0010141,1.13e-08,1;UBERON:0005891,1.13e-08,1;UBERON:0000991,3.32e-08,21;UBERON:0009196,3.32e-08,21;UBERON:0009117,3.32e-08,21;UBERON:0005564,3.32e-08,21;UBERON:0001708,6.04e-08,4;UBERON:0008895,6.04e-08,4;UBERON:0004176,8.03e-08,22;UBERON:0002119,8.53e-08,4 | |||
|phase1_expression=0.908391896352783,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,6.29719171688325,4.79060487755095,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,1.35282597214308,1.09098448236334,0,0.121973706129595,0,0,0,0,0,0,3.21620469096443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603173834469785,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0.93733833986777,38.4679073575388,1.27597587518148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55126058909333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899756920638513,0,0,0,0,0,0,0,0,0.716243852959582,0,0,0,0,4.06551398755941,1.30139853857622,0,0.502548796003046,3.82763250991898,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23297027036899,0.460385919864187,0.280660094433074,0,1.53512174720011,3.37793234401576,0,0,0,0,0,0,0,2.20557117333613,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,11.2478750890912,0,0,0,0,0,0,0,0.267096106940212,0.330569830721956,0,0,0,0,0,0,0,0,0,0.18532421910392,1.86062352764589,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.563391205064483,0.286822704408103,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,183.879091138874,0,0,1.43789361835723,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0.227586896570999,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,1.18219047581419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.783532859223623,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0.240476460754601,0,0,0,0,0,0,0,0,0.407712618220842,0.313808538937,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0.415440338029185,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,5.28202867534807,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.295710299979268,4.61960624774737,0,1.08684069813382,0,0,0,0,0.380805212168795,4.06870733204662,0,2.90008504014719,0,0,0.800055529326307,0.343395705182793,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0,0.205116364240755,0.252071696221718,0,0.484426936895553,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0.45178432815584,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0.0620747142958579,2.24263725161227,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.908391896352783,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,6.29719171688325,4.79060487755095,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,1.35282597214308,1.09098448236334,0,0.121973706129595,0,0,0,0,0,0,3.21620469096443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603173834469785,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0.93733833986777,38.4679073575388,1.27597587518148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55126058909333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899756920638513,0,0,0,0,0,0,0,0,0.716243852959582,0,0,0,0,4.06551398755941,1.30139853857622,0,0.502548796003046,3.82763250991898,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23297027036899,0.460385919864187,0.280660094433074,0,1.53512174720011,3.37793234401576,0,0,0,0,0,0,0,2.20557117333613,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,11.2478750890912,0,0,0,0,0,0,0,0.267096106940212,0.330569830721956,0,0,0,0,0,0,0,0,0,0.18532421910392,1.86062352764589,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.563391205064483,0.286822704408103,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,183.879091138874,0,0,1.43789361835723,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0.227586896570999,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,1.18219047581419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.783532859223623,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0.240476460754601,0,0,0,0,0,0,0,0,0.407712618220842,0.313808538937,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0.415440338029185,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,5.28202867534807,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.295710299979268,4.61960624774737,0,1.08684069813382,0,0,0,0,0.380805212168795,4.06870733204662,0,2.90008504014719,0,0,0.800055529326307,0.343395705182793,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0,0.205116364240755,0.252071696221718,0,0.484426936895553,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0.45178432815584,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0.0620747142958579,2.24263725161227,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:41374749..41374779,+ | |short_description=p@chr12:41374749..41374779,+ | ||
}} | }} |
Latest revision as of 08:26, 24 July 2015
Short description: | p@chr12:41374749..41374779, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:41374749..41374779, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.22e-10 | 3 |
epithelial cell of Malassez | 2.59e-10 | 3 |
omentum preadipocyte | 3.27e-10 | 3 |
oligodendrocyte | 6.12e-10 | 7 |
macroglial cell | 6.12e-10 | 7 |
astrocyte | 6.12e-10 | 7 |
oligodendrocyte precursor cell | 6.12e-10 | 7 |
gingival epithelial cell | 7.46e-10 | 3 |
neural cell | 5.38e-09 | 25 |
androgen binding protein secreting cell | 1.13e-08 | 1 |
seminiferous tubule epithelial cell | 1.13e-08 | 1 |
Sertoli cell | 1.13e-08 | 1 |
neuronal stem cell | 2.09e-08 | 8 |
mesenchymal stem cell of Wharton's jelly | 3.57e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 7.46e-10 | 3 |
female gonad | 9.07e-09 | 13 |
mesothelium | 1.13e-08 | 1 |
seminiferous tubule of testis | 1.13e-08 | 1 |
epithelium of male gonad | 1.13e-08 | 1 |
epithelial cord | 1.13e-08 | 1 |
sex cord | 1.13e-08 | 1 |
seminiferous tubule epithelium | 1.13e-08 | 1 |
testis sex cord | 1.13e-08 | 1 |
genital ridge | 1.13e-08 | 1 |
primitive sex cord of indifferent gonad | 1.13e-08 | 1 |
coelomic epithelium | 1.13e-08 | 1 |
gonad | 3.32e-08 | 21 |
indifferent external genitalia | 3.32e-08 | 21 |
indifferent gonad | 3.32e-08 | 21 |
gonad primordium | 3.32e-08 | 21 |
jaw skeleton | 6.04e-08 | 4 |
splanchnocranium | 6.04e-08 | 4 |
external genitalia | 8.03e-08 | 22 |
left ovary | 8.53e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.77e-08 | 14 |