FFCP PHASE1:Hg19::chr17:61920023..61920110,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6603 | |EntrezGene=6603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11107 | |HGNC=11107 | ||
|TSSclassifier=strong | |||
|UniProt=Q92925 | |UniProt=Q92925 | ||
|association_with_transcript=-94bp_to_ENST00000225742_5end | |association_with_transcript=-94bp_to_ENST00000225742_5end | ||
|cluster_id=chr17:61920023..61920110,- | |||
|description=CAGE_peak_1_at_SMARCD2_5end | |description=CAGE_peak_1_at_SMARCD2_5end | ||
|id=chr17:61920023..61920110,- | |id=chr17:61920023..61920110,- | ||
|ontology_enrichment_celltype=CL:0000066!8.01e-15!254;CL:0002321!1.28e-12!248;CL:0000220!4.96e-12!246;CL:0000548!7.72e-11!679;CL:0000004!7.72e-11!679;CL:0000255!7.72e-11!679;CL:0000012!1.75e-10!682 | |ontology_enrichment_celltype=CL:0000066!8.01e-15!254;CL:0002321!1.28e-12!248;CL:0000220!4.96e-12!246;CL:0000548!7.72e-11!679;CL:0000004!7.72e-11!679;CL:0000255!7.72e-11!679;CL:0000012!1.75e-10!682 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.90e-14,253;CL:0002321,4.46e-13,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!4.04e-09!126;UBERON:0005177!5.40e-09!107;UBERON:0009569!9.63e-09!113;UBERON:0000464!3.87e-08!104;UBERON:0002100!1.81e-07!216;UBERON:0004119!5.30e-07!169;UBERON:0000925!5.30e-07!169;UBERON:0006595!5.30e-07!169;UBERON:0005178!9.48e-07!34;UBERON:0002224!9.48e-07!34;UBERON:0003104!9.71e-07!238;UBERON:0009142!9.71e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001041;4.53e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.43e-09,101;UBERON:0002100,6.51e-09,199;UBERON:0009569,1.83e-08,112;UBERON:0005178,7.45e-07,34;UBERON:0002224,7.45e-07,34 | |||
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| ||
|short_description=p1@SMARCD2 | |short_description=p1@SMARCD2 | ||
}} | }} |
Latest revision as of 18:25, 16 September 2015
Short description: | p1@SMARCD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SMARCD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -94bp_to_ENST00000225742_5end |
EntrezGene: | SMARCD2 |
HGNC: | 11107 |
UniProt: | Q92925 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.90e-14 | 253 |
embryonic cell | 4.46e-13 | 250 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 3.43e-09 | 101 |
trunk | 6.51e-09 | 199 |
subdivision of trunk | 1.83e-08 | 112 |
thoracic cavity element | 7.45e-07 | 34 |
thoracic cavity | 7.45e-07 | 34 |