FFCP PHASE1:Hg19::chr12:52511996..52512012,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52511996..52512012,- | |||
|coexpression_cluster_id=C3241 | |||
|description=CAGE_peak_at_chr12:52511996..52512012,- | |description=CAGE_peak_at_chr12:52511996..52512012,- | ||
|id=chr12:52511996..52512012,- | |id=chr12:52511996..52512012,- | ||
|ontology_enrichment_celltype=CL:0000945!2.38e-13!24;CL:0000826!2.38e-13!24;CL:0000242!3.66e-10!2;CL:0002149!2.72e-07!6;CL:0002255!2.72e-07!6 | |ontology_enrichment_celltype=CL:0000945!2.38e-13!24;CL:0000826!2.38e-13!24;CL:0000242!3.66e-10!2;CL:0002149!2.72e-07!6;CL:0002255!2.72e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000123;6.80e-07;2!CL:0000242;6.80e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,7.20e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;8.81e-28;10!UBERON:0007687;8.81e-28;10!UBERON:0007297;1.26e-23;2!UBERON:0005754;8.84e-13;1!UBERON:0003104;3.13e-09;31 | |||
|ontology_enrichment_disease=DOID:3001!2.72e-07!6 | |ontology_enrichment_disease=DOID:3001!2.72e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:2355;1.56e-12;1!DOID:74;6.80e-07;2!DOID:4468;9.53e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.57e-12,1;DOID:74,6.80e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0006947!3.87e-15!3;UBERON:0004054!3.87e-15!3;UBERON:0004175!7.79e-13!25;UBERON:0005904!1.83e-11!4;UBERON:0003133!6.56e-09!48;UBERON:0005795!9.95e-09!22;UBERON:0005156!2.81e-08!59;UBERON:0000990!2.81e-08!59;UBERON:0003135!6.38e-07!11;UBERON:0000995!8.85e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.11e-34;3!UBERON:0004054;1.11e-34;3!UBERON:0005904;3.37e-26;4!UBERON:0001000;7.02e-13;1!UBERON:0005352;7.02e-13;1!UBERON:0000998;8.84e-13;1!UBERON:0006868;8.84e-13;1!UBERON:0001301;1.25e-12;1!UBERON:0005795;3.08e-12;1!UBERON:0000058;7.56e-11;10!UBERON:0003135;6.56e-10;11!UBERON:0004175;8.06e-09;21!UBERON:0003101;1.99e-08;22!UBERON:0000079;1.99e-08;22!UBERON:0002113;1.23e-07;24!UBERON:0011143;1.23e-07;24!UBERON:0000341;9.53e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.11e-34,3;UBERON:0004054,1.11e-34,3;UBERON:0005904,3.37e-26,4;UBERON:0002113,3.54e-15,26;UBERON:0003918,3.54e-15,26;UBERON:0011143,3.54e-15,26;UBERON:0005095,3.54e-15,26;UBERON:0007687,3.54e-15,26;UBERON:0001000,7.03e-13,1;UBERON:0005352,7.03e-13,1;UBERON:0000998,8.85e-13,1;UBERON:0006868,8.85e-13,1;UBERON:0000489,1.13e-12,31;UBERON:0001301,1.25e-12,1;UBERON:0006554,5.54e-11,47;UBERON:0001008,9.68e-11,48;UBERON:0003135,6.56e-10,11;UBERON:0003101,2.15e-08,22;UBERON:0000079,2.15e-08,22;UBERON:0004175,1.96e-07,25;UBERON:0005172,4.21e-07,54;UBERON:0005173,4.21e-07,54;UBERON:0000341,8.06e-07,2 | |||
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| ||
|short_description=p@chr12:52511996..52512012,- | |short_description=p@chr12:52511996..52512012,- | ||
}} | }} |
Latest revision as of 09:28, 24 July 2015
Short description: | p@chr12:52511996..52512012, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52511996..52512012, - |
Coexpression cluster: | C3241_thyroid_ductus_seminal_throat_epididymis_serous_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.11e-34 | 3 |
internal male genitalia | 1.11e-34 | 3 |
duct of male reproductive system | 3.37e-26 | 4 |
kidney | 3.54e-15 | 26 |
kidney mesenchyme | 3.54e-15 | 26 |
upper urinary tract | 3.54e-15 | 26 |
kidney rudiment | 3.54e-15 | 26 |
kidney field | 3.54e-15 | 26 |
vas deferens | 7.03e-13 | 1 |
spermatic cord | 7.03e-13 | 1 |
seminal vesicle | 8.85e-13 | 1 |
seminal fluid secreting gland | 8.85e-13 | 1 |
cavitated compound organ | 1.13e-12 | 31 |
epididymis | 1.25e-12 | 1 |
urinary system structure | 5.54e-11 | 47 |
renal system | 9.68e-11 | 48 |
male reproductive organ | 6.56e-10 | 11 |
male organism | 2.15e-08 | 22 |
male reproductive system | 2.15e-08 | 22 |
internal genitalia | 1.96e-07 | 25 |
abdomen element | 4.21e-07 | 54 |
abdominal segment element | 4.21e-07 | 54 |
throat | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.57e-12 | 1 |
hematopoietic system disease | 6.80e-07 | 2 |