FFCP PHASE1:Hg19::chr12:72666140..72666186,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29953 | |EntrezGene=29953 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30748 | |HGNC=30748 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKU6 | |UniProt=Q9UKU6 | ||
|association_with_transcript=-276bp_to_ENST00000261180_5end | |association_with_transcript=-276bp_to_ENST00000261180_5end | ||
|cluster_id=chr12:72666140..72666186,+ | |||
|description=CAGE_peak_1_at_TRHDE_5end | |description=CAGE_peak_1_at_TRHDE_5end | ||
|id=chr12:72666140..72666186,+ | |id=chr12:72666140..72666186,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.56e-08!180;CL:0002620!2.96e-07!23 | |ontology_enrichment_celltype=CL:0000055!7.56e-08!180;CL:0002620!2.96e-07!23 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.33e-22!365;UBERON:0000073!4.07e-18!94;UBERON:0001016!4.07e-18!94;UBERON:0001049!5.43e-18!57;UBERON:0005068!5.43e-18!57;UBERON:0006241!5.43e-18!57;UBERON:0007135!5.43e-18!57;UBERON:0002346!4.91e-17!90;UBERON:0005743!6.30e-17!86;UBERON:0001017!1.09e-16!82;UBERON:0000955!2.69e-16!69;UBERON:0006238!2.69e-16!69;UBERON:0000481!3.24e-16!347;UBERON:0003075!3.43e-16!86;UBERON:0007284!3.43e-16!86;UBERON:0002616!4.09e-16!59;UBERON:0001869!7.33e-16!32;UBERON:0002020!5.94e-15!34;UBERON:0003528!5.94e-15!34;UBERON:0000033!6.75e-15!123;UBERON:0001893!1.18e-14!34;UBERON:0003080!1.18e-14!42;UBERON:0002780!1.27e-14!41;UBERON:0001890!1.27e-14!41;UBERON:0006240!1.27e-14!41;UBERON:0003056!1.31e-14!61;UBERON:0000924!2.47e-14!173;UBERON:0006601!2.47e-14!173;UBERON:0002791!5.15e-14!33;UBERON:0000153!6.41e-14!129;UBERON:0007811!6.41e-14!129;UBERON:0004121!1.47e-13!169;UBERON:0000956!2.50e-13!25;UBERON:0000203!2.50e-13!25;UBERON:0002619!4.56e-13!22;UBERON:0007023!3.16e-12!115;UBERON:0001950!5.19e-12!20;UBERON:0000468!8.82e-11!659;UBERON:0000483!2.28e-09!309;UBERON:0000119!2.92e-09!312;UBERON:0000064!4.97e-09!219;UBERON:0000922!5.02e-08!612;UBERON:0000062!5.91e-08!511;UBERON:0002050!1.39e-07!605;UBERON:0005423!1.39e-07!605;UBERON:0000923!1.63e-07!604;UBERON:0005291!1.63e-07!604;UBERON:0006598!1.63e-07!604;UBERON:0002532!1.63e-07!604;UBERON:0003886!1.65e-07!63;UBERON:0000467!6.00e-07!625;UBERON:0000480!8.24e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.79e-17;32!UBERON:0002619;3.39e-16;22!UBERON:0000956;6.08e-16;25!UBERON:0000203;6.08e-16;25!UBERON:0002791;6.15e-16;32!UBERON:0003528;7.68e-16;34!UBERON:0002020;7.68e-16;34!UBERON:0001893;3.60e-15;34!UBERON:0001950;8.86e-15;20!UBERON:0002780;1.35e-11;41!UBERON:0001890;1.35e-11;41!UBERON:0000073;2.51e-09;53!UBERON:0002616;2.51e-09;53!UBERON:0000200;2.41e-07;6!UBERON:0000955;5.60e-07;68!UBERON:0001017;7.80e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.19e-19,32;UBERON:0003528,2.20e-18,34;UBERON:0002020,2.20e-18,34;UBERON:0000073,1.35e-17,53;UBERON:0002616,1.35e-17,53;UBERON:0002791,1.88e-17,32;UBERON:0001893,1.92e-17,34;UBERON:0001049,5.69e-17,56;UBERON:0005068,5.69e-17,56;UBERON:0006241,5.69e-17,56;UBERON:0007135,5.69e-17,56;UBERON:0002619,3.78e-16,22;UBERON:0000956,8.23e-16,25;UBERON:0000203,8.23e-16,25;UBERON:0002780,1.20e-15,41;UBERON:0001890,1.20e-15,41;UBERON:0003080,1.20e-15,41;UBERON:0006240,1.20e-15,41;UBERON:0001950,9.70e-15,20;UBERON:0000955,1.96e-14,68;UBERON:0006238,1.96e-14,68;UBERON:0002346,2.14e-14,86;UBERON:0001016,2.26e-14,89;UBERON:0001017,1.99e-13,81;UBERON:0003075,3.35e-13,82;UBERON:0007284,3.35e-13,82;UBERON:0003056,9.01e-13,61;UBERON:0004121,8.84e-11,171;UBERON:0000924,8.84e-11,171;UBERON:0006601,8.84e-11,171;UBERON:0010371,9.78e-11,104;UBERON:0010314,6.16e-09,132;UBERON:0000200,2.55e-07,6;UBERON:0011216,4.11e-07,223 | |||
|phase1_expression=0.181678379270557,0.856402095563933,1.12763523276777,2.00146596706261,2.68176656656373,0,0,0.631719873426831,1.04474251279935,0.491467873003018,0,0.873765488520689,0,2.59909341216098,1.65698687863958,2.01697543935533,0.602694528023977,2.19093027116212,3.41552959153355,0.61560529038394,1.42800483870977,0,1.14494394852423,2.46373965131192,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,1.41802225746102,1.55210578223795,0.614843499851882,2.22664428346111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.12663051166458,2.25095607382472,0.286836620748814,0,2.80338800071154,1.06748995729705,0.74000264525148,0,0,0.163461903113459,0,0,0.70296429550139,4.05808099879417,1.1409436430889,0.149448680551801,0.822041490506354,1.29498355494505,0.98315564691574,3.47062091133319,2.57952066354713,3.20309921644873,0,0,0,0.718618141816238,2.18836948140286,2.12701483782339,6.64953877162039,0.877955241761676,0.30648779579902,0.150238058906597,0.226864366320042,3.04962380671065,3.20336083227851,1.48352330811693,3.60109315301283,3.50378599410692,3.86460810068444,2.41951913231067,0.337552664482532,0.194874010322397,1.7670364197088,2.85354685791128,3.39456719319505,7.10019185033229,3.82857973265033,4.0694542154517,0.966304265816484,1.09098448236334,1.14721838155602,0,0.795178609928912,1.16193942869518,0.725627385107593,0.504641701751257,0.36497735907583,1.56449532329816,1.28648187638577,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86261773342101,0,0,0,2.40194934417936,2.52425656439839,0,0,0.0925884451585296,2.28065813717227,0,0,1.39116485970092,2.93521735589554,0,0,0,0,0,0,0,0,0,3.19166043577833,0.708875486211932,2.23896306757121,0.871901815541886,0,0,0,0,0,0.25248486685276,0.063497894292169,0,0,0,0.308482478109971,0,0,0.336393253036082,0,0.2933531432838,4.52451005152222,3.57656445851882,0,6.38251479803689,4.16029747645464,0.771622122786426,1.41849132023278,1.5985330740966,0.142977993658148,3.7983512377401,2.46972101034231,0.325736184293735,0,2.37585561880029,0,0,0,0,0,0,0.479249710983165,0,14.2636905040718,0.289562613335158,1.43833425785268,0.358121926479791,0,0,0,0,1.01637849688985,0,0,0.502548796003046,0,0,0,0,2.33113834266366,2.50085260529839,2.17012018959788,2.70362119990049,0.535286966391485,1.10391690523754,2.57711112983969,0,0,1.03473071292505,1.32845119707087,1.29058417979192,5.21301686808497,0.979005787313703,0,0.206768026122887,0,0,0.606255142892519,1.66435439510497,0.604780586659361,0,0.153461973288062,0.280660094433074,1.40953064181271,0.511707249066704,2.0911009748669,0,1.85051632563187,0.710246901252508,3.44934055257998,5.71179872101983,3.25389059687886,0,0.200506470303285,0.0920809889358963,2.87036120411517,3.45973219212762,4.06485686374215,1.35359883872224,3.85076685522074,2.35304930753057,1.46139224653261,4.01096189792928,0,0,3.88648648983851,1.54227252690289,0.270946437543853,1.00337954770971,3.05851527654046,2.49322802678617,2.46262230194396,2.19259876645935,1.8300481571743,0.256450125116389,0.984043937099117,0.650756789328606,1.23649213977267,0,0,0,0,3.21367859688319,1.45006077438183,1.3864375540318,1.5350367472613,0.413509717453592,1.07420244868274,0.435050081742686,1.19317278382541,0.534192213880424,0,0,0,0,0,3.46293581513704,0.6970372701606,0,0,0,2.22389062924704,0.286249773483982,1.116475108079,0.632758849437452,0.571890581771475,1.27948895655667,10.2705357128141,0,0,1.61885211824983,0.274537029736055,0.824686816419805,0,0,0,1.46290121726877,1.46228093778771,0,4.64099698787152,0.282810863907425,0,2.2054613741845,0.66343897524122,0,1.15755106853338,5.9030527684197,2.23201414658974,0.30982349809975,1.97186921772569,1.00387946542836,1.67023369722306,0.7133421029625,1.06428319221179,0,0,0.379473173765715,1.39973888097993,0,0,0,1.41215701165169,0,0,0.443430153536676,0,0.507447609232169,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,1.22896305723383,0.894704431569664,1.00109485027145,0.586164286206121,0,0,1.08182271390393,0,0,2.05854594449042,0.586032717087576,0,0,0,0,0.890894042497916,0,0.994147647766298,1.96937182974718,2.44879151050393,0,14.5676531608315,0.597743964753209,0.828851746593443,0,0.102268682502155,0,0,2.51631383212515,0,0,0.493217028184668,0,0,4.84666373047609,7.69975214743365,1.99613798001194,0,0,0.724999575434793,1.93448862085349,0.508507300585533,0,0,3.79085997398231,0.694499979733169,1.77148277162768,2.53252521113357,15.2581736317083,21.1206386468639,7.09314285488514,7.89787429754301,0,0.139423744278603,3.69361240818226,0,0,4.21860928725929,0,0.31900115973192,0.915975934018623,0,0,0,0,0,0,0,0,0,0.632994193584081,3.91758739581955,0,0,0,0.619202951523374,1.83309043480088,0,0,0,0.269604531922708,0,1.639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|phase1_expression=0.181678379270557,0.856402095563933,1.12763523276777,2.00146596706261,2.68176656656373,0,0,0.631719873426831,1.04474251279935,0.491467873003018,0,0.873765488520689,0,2.59909341216098,1.65698687863958,2.01697543935533,0.602694528023977,2.19093027116212,3.41552959153355,0.61560529038394,1.42800483870977,0,1.14494394852423,2.46373965131192,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,1.41802225746102,1.55210578223795,0.614843499851882,2.22664428346111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.12663051166458,2.25095607382472,0.286836620748814,0,2.80338800071154,1.06748995729705,0.74000264525148,0,0,0.163461903113459,0,0,0.70296429550139,4.05808099879417,1.1409436430889,0.149448680551801,0.822041490506354,1.29498355494505,0.98315564691574,3.47062091133319,2.57952066354713,3.20309921644873,0,0,0,0.718618141816238,2.18836948140286,2.12701483782339,6.64953877162039,0.877955241761676,0.30648779579902,0.150238058906597,0.226864366320042,3.04962380671065,3.20336083227851,1.48352330811693,3.60109315301283,3.50378599410692,3.86460810068444,2.41951913231067,0.337552664482532,0.194874010322397,1.7670364197088,2.85354685791128,3.39456719319505,7.10019185033229,3.82857973265033,4.0694542154517,0.966304265816484,1.09098448236334,1.14721838155602,0,0.795178609928912,1.16193942869518,0.725627385107593,0.504641701751257,0.36497735907583,1.56449532329816,1.28648187638577,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86261773342101,0,0,0,2.40194934417936,2.52425656439839,0,0,0.0925884451585296,2.28065813717227,0,0,1.39116485970092,2.93521735589554,0,0,0,0,0,0,0,0,0,3.19166043577833,0.708875486211932,2.23896306757121,0.871901815541886,0,0,0,0,0,0.25248486685276,0.063497894292169,0,0,0,0.308482478109971,0,0,0.336393253036082,0,0.2933531432838,4.52451005152222,3.57656445851882,0,6.38251479803689,4.16029747645464,0.771622122786426,1.41849132023278,1.5985330740966,0.142977993658148,3.7983512377401,2.46972101034231,0.325736184293735,0,2.37585561880029,0,0,0,0,0,0,0.479249710983165,0,14.2636905040718,0.289562613335158,1.43833425785268,0.358121926479791,0,0,0,0,1.01637849688985,0,0,0.502548796003046,0,0,0,0,2.33113834266366,2.50085260529839,2.17012018959788,2.70362119990049,0.535286966391485,1.10391690523754,2.57711112983969,0,0,1.03473071292505,1.32845119707087,1.29058417979192,5.21301686808497,0.979005787313703,0,0.206768026122887,0,0,0.606255142892519,1.66435439510497,0.604780586659361,0,0.153461973288062,0.280660094433074,1.40953064181271,0.511707249066704,2.0911009748669,0,1.85051632563187,0.710246901252508,3.44934055257998,5.71179872101983,3.25389059687886,0,0.200506470303285,0.0920809889358963,2.87036120411517,3.45973219212762,4.06485686374215,1.35359883872224,3.85076685522074,2.35304930753057,1.46139224653261,4.01096189792928,0,0,3.88648648983851,1.54227252690289,0.270946437543853,1.00337954770971,3.05851527654046,2.49322802678617,2.46262230194396,2.19259876645935,1.8300481571743,0.256450125116389,0.984043937099117,0.650756789328606,1.23649213977267,0,0,0,0,3.21367859688319,1.45006077438183,1.3864375540318,1.5350367472613,0.413509717453592,1.07420244868274,0.435050081742686,1.19317278382541,0.534192213880424,0,0,0,0,0,3.46293581513704,0.6970372701606,0,0,0,2.22389062924704,0.286249773483982,1.116475108079,0.632758849437452,0.571890581771475,1.27948895655667,10.2705357128141,0,0,1.61885211824983,0.274537029736055,0.824686816419805,0,0,0,1.46290121726877,1.46228093778771,0,4.64099698787152,0.282810863907425,0,2.2054613741845,0.66343897524122,0,1.15755106853338,5.9030527684197,2.23201414658974,0.30982349809975,1.97186921772569,1.00387946542836,1.67023369722306,0.7133421029625,1.06428319221179,0,0,0.379473173765715,1.39973888097993,0,0,0,1.41215701165169,0,0,0.443430153536676,0,0.507447609232169,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,1.22896305723383,0.894704431569664,1.00109485027145,0.586164286206121,0,0,1.08182271390393,0,0,2.05854594449042,0.586032717087576,0,0,0,0,0.890894042497916,0,0.994147647766298,1.96937182974718,2.44879151050393,0,14.5676531608315,0.597743964753209,0.828851746593443,0,0.102268682502155,0,0,2.51631383212515,0,0,0.493217028184668,0,0,4.84666373047609,7.69975214743365,1.99613798001194,0,0,0.724999575434793,1.93448862085349,0.508507300585533,0,0,3.79085997398231,0.694499979733169,1.77148277162768,2.53252521113357,15.2581736317083,21.1206386468639,7.09314285488514,7.89787429754301,0,0.139423744278603,3.69361240818226,0,0,4.21860928725929,0,0.31900115973192,0.915975934018623,0,0,0,0,0,0,0,0,0,0.632994193584081,3.91758739581955,0,0,0,0.619202951523374,1.83309043480088,0,0,0,0.269604531922708,0,1.639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| ||
|short_description=p1@TRHDE | |short_description=p1@TRHDE | ||
}} | }} |
Latest revision as of 18:32, 24 September 2015
Short description: | p1@TRHDE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRHDE_5end |
Coexpression cluster: | NA |
Association with transcript: | -276bp_to_ENST00000261180_5end |
EntrezGene: | TRHDE |
HGNC: | 30748 |
UniProt: | Q9UKU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 3.19e-19 | 32 |
brain grey matter | 2.20e-18 | 34 |
gray matter | 2.20e-18 | 34 |
regional part of nervous system | 1.35e-17 | 53 |
regional part of brain | 1.35e-17 | 53 |
regional part of telencephalon | 1.88e-17 | 32 |
telencephalon | 1.92e-17 | 34 |
neural tube | 5.69e-17 | 56 |
neural rod | 5.69e-17 | 56 |
future spinal cord | 5.69e-17 | 56 |
neural keel | 5.69e-17 | 56 |
regional part of cerebral cortex | 3.78e-16 | 22 |
cerebral cortex | 8.23e-16 | 25 |
pallium | 8.23e-16 | 25 |
regional part of forebrain | 1.20e-15 | 41 |
forebrain | 1.20e-15 | 41 |
anterior neural tube | 1.20e-15 | 41 |
future forebrain | 1.20e-15 | 41 |
neocortex | 9.70e-15 | 20 |
brain | 1.96e-14 | 68 |
future brain | 1.96e-14 | 68 |
neurectoderm | 2.14e-14 | 86 |
nervous system | 2.26e-14 | 89 |
central nervous system | 1.99e-13 | 81 |
neural plate | 3.35e-13 | 82 |
presumptive neural plate | 3.35e-13 | 82 |
pre-chordal neural plate | 9.01e-13 | 61 |
ectoderm-derived structure | 8.84e-11 | 171 |
ectoderm | 8.84e-11 | 171 |
presumptive ectoderm | 8.84e-11 | 171 |
ecto-epithelium | 9.78e-11 | 104 |
structure with developmental contribution from neural crest | 6.16e-09 | 132 |
gyrus | 2.55e-07 | 6 |
organ system subdivision | 4.11e-07 | 223 |