FFCP PHASE1:Hg19::chr12:9268765..9268779,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2 | |EntrezGene=2 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7 | |HGNC=7 | ||
|TSSclassifier=strong | |||
|UniProt=P01023 | |UniProt=P01023 | ||
|association_with_transcript=-12bp_to_ENST00000318602_5end | |association_with_transcript=-12bp_to_ENST00000318602_5end | ||
|cluster_id=chr12:9268765..9268779,- | |||
|coexpression_cluster_id=C308 | |||
|description=CAGE_peak_8_at_A2M_5end | |description=CAGE_peak_8_at_A2M_5end | ||
|id=chr12:9268765..9268779,- | |id=chr12:9268765..9268779,- | ||
|ontology_enrichment_celltype=CL:0000181!9.57e-07!12;CL:0000417!9.57e-07!12;CL:0000668!9.57e-07!12;CL:0000414!9.57e-07!12;CL:0000412!9.57e-07!12;CL:0000182!9.57e-07!12 | |ontology_enrichment_celltype=CL:0000181!9.57e-07!12;CL:0000417!9.57e-07!12;CL:0000668!9.57e-07!12;CL:0000414!9.57e-07!12;CL:0000412!9.57e-07!12;CL:0000182!9.57e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.45e-16;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.15e-16,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.14e-17;11!UBERON:0009497;6.22e-15;13!UBERON:0001041;3.08e-12;30!UBERON:0009143;5.74e-09;1!UBERON:0006242;5.74e-09;1!UBERON:0006595;8.03e-07;86 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002423;1.95e-14;25!UBERON:0002107;2.66e-14;19!UBERON:0006925;2.66e-14;19!UBERON:0002171;1.81e-09;1!UBERON:0006518;1.81e-09;1!UBERON:0008949;1.81e-09;1!UBERON:0000101;1.81e-09;1!UBERON:0002167;1.81e-09;1!UBERON:0006834;5.74e-09;1!UBERON:0002365;2.32e-08;31!UBERON:0002330;2.32e-08;31!UBERON:0002368;3.80e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,1.87e-14,25;UBERON:0000015,1.87e-14,25;UBERON:0002423,1.87e-14,25;UBERON:0006235,1.87e-14,25;UBERON:0004161,1.87e-14,25;UBERON:0002107,2.43e-14,19;UBERON:0006925,2.43e-14,19;UBERON:0008836,2.43e-14,19;UBERON:0008835,2.55e-12,22;UBERON:0003894,2.55e-12,22;UBERON:0009854,9.18e-12,23;UBERON:0007499,8.78e-11,25;UBERON:0007023,1.34e-10,114;UBERON:0009856,2.39e-10,26;UBERON:0004921,2.47e-10,118;UBERON:0005911,1.01e-09,82;UBERON:0002171,1.89e-09,1;UBERON:0006518,1.89e-09,1;UBERON:0008949,1.89e-09,1;UBERON:0000101,1.89e-09,1;UBERON:0002167,1.89e-09,1;UBERON:0001007,2.88e-09,145;UBERON:0001555,2.88e-09,145;UBERON:0007026,2.88e-09,145;UBERON:0005177,5.32e-09,101;UBERON:0006834,9.17e-09,1;UBERON:0002365,1.35e-08,31;UBERON:0002330,1.35e-08,31;UBERON:0003929,3.66e-08,54;UBERON:0004119,3.81e-08,160;UBERON:0000925,3.81e-08,160;UBERON:0006595,3.81e-08,160;UBERON:0002368,1.48e-07,35;UBERON:0001041,2.22e-07,87 | |||
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| ||
|short_description=p8@A2M | |short_description=p8@A2M | ||
}} | }} |
Latest revision as of 22:46, 15 September 2015
Short description: | p8@A2M |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_A2M_5end |
Coexpression cluster: | C308_lung_Hepatocyte_liver_thyroid_heart_left_breast |
Association with transcript: | -12bp_to_ENST00000318602_5end |
EntrezGene: | A2M |
HGNC: | 7 |
UniProt: | P01023 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.15e-16 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 1.87e-14 | 25 |
anatomical boundary | 1.87e-14 | 25 |
hepatobiliary system | 1.87e-14 | 25 |
foregut-midgut junction | 1.87e-14 | 25 |
septum transversum | 1.87e-14 | 25 |
liver | 2.43e-14 | 19 |
digestive gland | 2.43e-14 | 19 |
liver bud | 2.43e-14 | 19 |
hepatic diverticulum | 2.55e-12 | 22 |
liver primordium | 2.55e-12 | 22 |
digestive tract diverticulum | 9.18e-12 | 23 |
epithelial sac | 8.78e-11 | 25 |
adult organism | 1.34e-10 | 114 |
sac | 2.39e-10 | 26 |
subdivision of digestive tract | 2.47e-10 | 118 |
endo-epithelium | 1.01e-09 | 82 |
lower lobe of right lung | 1.89e-09 | 1 |
right lung lobe | 1.89e-09 | 1 |
lower lobe of lung | 1.89e-09 | 1 |
lobe of lung | 1.89e-09 | 1 |
right lung | 1.89e-09 | 1 |
digestive system | 2.88e-09 | 145 |
digestive tract | 2.88e-09 | 145 |
primitive gut | 2.88e-09 | 145 |
trunk region element | 5.32e-09 | 101 |
uterus or analog | 9.17e-09 | 1 |
exocrine gland | 1.35e-08 | 31 |
exocrine system | 1.35e-08 | 31 |
gut epithelium | 3.66e-08 | 54 |
endoderm-derived structure | 3.81e-08 | 160 |
endoderm | 3.81e-08 | 160 |
presumptive endoderm | 3.81e-08 | 160 |
endocrine gland | 1.48e-07 | 35 |
foregut | 2.22e-07 | 87 |