FFCP PHASE1:Hg19::chr12:96379399..96379403,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:96379399..96379403,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr12:96379399..96379403,- | |description=CAGE_peak_at_chr12:96379399..96379403,- | ||
|id=chr12:96379399..96379403,- | |id=chr12:96379399..96379403,- | ||
|ontology_enrichment_celltype=CL:0000988!3.19e-09!182;CL:0000037!6.78e-09!172;CL:0000566!6.78e-09!172;CL:0002032!1.32e-08!165;CL:0000837!1.32e-08!165;CL:0000738!6.90e-08!140;CL:0002393!7.68e-08!9;CL:0002397!7.68e-08!9;CL:0002087!4.03e-07!119;CL:0002031!5.49e-07!124 | |ontology_enrichment_celltype=CL:0000988!3.19e-09!182;CL:0000037!6.78e-09!172;CL:0000566!6.78e-09!172;CL:0002032!1.32e-08!165;CL:0000837!1.32e-08!165;CL:0000738!6.90e-08!140;CL:0002393!7.68e-08!9;CL:0002397!7.68e-08!9;CL:0002087!4.03e-07!119;CL:0002031!5.49e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000313;1.07e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.81e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.53e-12;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;1.07e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.81e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.15e-15!15;UBERON:0000179!1.15e-15!15;UBERON:0000463!1.15e-15!15;UBERON:0002390!6.01e-10!102;UBERON:0003061!6.01e-10!102;UBERON:0002193!1.05e-08!112;UBERON:0003929!8.69e-07!54 | |ontology_enrichment_uberon=UBERON:0000178!1.15e-15!15;UBERON:0000179!1.15e-15!15;UBERON:0000463!1.15e-15!15;UBERON:0002390!6.01e-10!102;UBERON:0003061!6.01e-10!102;UBERON:0002193!1.05e-08!112;UBERON:0003929!8.69e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.18e-33;15!UBERON:0000179;1.18e-33;15!UBERON:0000463;1.18e-33;15!UBERON:0002390;2.13e-14;32!UBERON:0000941;4.53e-12;1!UBERON:0001785;4.53e-12;1!UBERON:0002464;4.53e-12;1!UBERON:0004904;4.53e-12;1!UBERON:0001021;4.53e-12;1!UBERON:0004911;1.07e-11;1!UBERON:0002193;6.45e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.84e-34,15;UBERON:0000179,8.84e-34,15;UBERON:0000463,8.84e-34,15;UBERON:0000941,4.06e-12,1;UBERON:0001785,4.06e-12,1;UBERON:0002464,4.06e-12,1;UBERON:0004904,4.06e-12,1;UBERON:0001021,4.06e-12,1;UBERON:0003902,4.06e-12,1;UBERON:0005425,4.06e-12,1;UBERON:0004911,1.81e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0.142169232487422,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0.422510572623884,0,0.628975936525128,0.673971786878971,0.150176892841506,0,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0.270803863765016,0.512365278902701,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0,0,0.651083453856419,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,0,42.5368732810611,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0.290633938513962,0,0,0,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0.128343036279748,0.254094624222463,1.30139853857622,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,1.12972560932135,0.43050537267123,0,0,0,2.02979043692868,2.29391162142713,2.84823593587081,1.19115887728894,2.87953591160336,0.648473311192717,1.62009431171434,1.58625035258854,0,0,0,0,0.144269212976445,0,0.159426272728822,0,0.191505370132367,0,0,0,0.228234679033192,0.156679895773023,0,0,1.2847046008296,0.201799707191048,1.27753871307098,0.687010689511529,0.614481528616916,0,0.500547425135725,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.333926115068718,0.494411622680279,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0.063186579628488,0,0.207376382794494,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.58620893471233,5.30027555648885,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0.107824811396682,0.314531883711793,0,0,0.425149840203366,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,2.85538840518309,0.0981477185010256,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.91064876540519,0,0.115233987555779,0,0,0,0.118193840883968,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,1.00669888618013,0.098150233615243,0.121917924982269,0,0.102662806856247,0,0,0.233939463462106,0,0,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0.160482733378337,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0.142169232487422,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0.422510572623884,0,0.628975936525128,0.673971786878971,0.150176892841506,0,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0.270803863765016,0.512365278902701,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0,0,0.651083453856419,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,0,42.5368732810611,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0.290633938513962,0,0,0,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0.128343036279748,0.254094624222463,1.30139853857622,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,1.12972560932135,0.43050537267123,0,0,0,2.02979043692868,2.29391162142713,2.84823593587081,1.19115887728894,2.87953591160336,0.648473311192717,1.62009431171434,1.58625035258854,0,0,0,0,0.144269212976445,0,0.159426272728822,0,0.191505370132367,0,0,0,0.228234679033192,0.156679895773023,0,0,1.2847046008296,0.201799707191048,1.27753871307098,0.687010689511529,0.614481528616916,0,0.500547425135725,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.333926115068718,0.494411622680279,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0.063186579628488,0,0.207376382794494,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.58620893471233,5.30027555648885,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0.107824811396682,0.314531883711793,0,0,0.425149840203366,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,2.85538840518309,0.0981477185010256,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.91064876540519,0,0.115233987555779,0,0,0,0.118193840883968,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,1.00669888618013,0.098150233615243,0.121917924982269,0,0.102662806856247,0,0,0.233939463462106,0,0,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0.160482733378337,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:96379399..96379403,- | |short_description=p@chr12:96379399..96379403,- | ||
}} | }} |
Latest revision as of 13:51, 24 July 2015
Short description: | p@chr12:96379399..96379403, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:96379399..96379403, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.81e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 8.84e-34 | 15 |
haemolymphatic fluid | 8.84e-34 | 15 |
organism substance | 8.84e-34 | 15 |
cranial nerve II | 4.06e-12 | 1 |
cranial nerve | 4.06e-12 | 1 |
nerve trunk | 4.06e-12 | 1 |
nerve connecting eye with brain | 4.06e-12 | 1 |
nerve | 4.06e-12 | 1 |
retinal neural layer | 4.06e-12 | 1 |
presumptive neural retina | 4.06e-12 | 1 |
epithelium of female gonad | 1.81e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.81e-11 | 1 |