FFCP PHASE1:Hg19::chr13:32313658..32313668,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122042 | |EntrezGene=122042 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17318 | |HGNC=17318 | ||
|TSSclassifier=strong | |||
|UniProt=Q3KU23 | |UniProt=Q3KU23 | ||
|association_with_transcript=-5bp_to_ENST00000380314_5end | |association_with_transcript=-5bp_to_ENST00000380314_5end | ||
|cluster_id=chr13:32313658..32313668,+ | |||
|coexpression_cluster_id=C3364 | |||
|description=CAGE_peak_3_at_RXFP2_5end | |description=CAGE_peak_3_at_RXFP2_5end | ||
|id=chr13:32313658..32313668,+ | |id=chr13:32313658..32313668,+ | ||
|ontology_enrichment_celltype=CL:0000594!1.25e-07!3 | |ontology_enrichment_celltype=CL:0000594!1.25e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.37e-13;2!UBERON:0005795;6.60e-11;10 | |||
|ontology_enrichment_disease=DOID:0060072!4.25e-13!4;DOID:0060084!1.60e-08!3;DOID:127!1.60e-08!3 | |ontology_enrichment_disease=DOID:0060072!4.25e-13!4;DOID:0060084!1.60e-08!3;DOID:127!1.60e-08!3 | ||
|ontology_enrichment_disease_v019=DOID:0060084;7.70e-34;3!DOID:127;7.70e-34;3!DOID:0060072;1.11e-25;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.10e-34,3;DOID:127,9.10e-34,3;DOID:0060072,1.26e-25,4 | |||
|ontology_enrichment_uberon=UBERON:0002020!3.16e-35!34;UBERON:0003528!3.16e-35!34;UBERON:0001869!7.71e-33!32;UBERON:0001893!8.89e-31!34;UBERON:0002308!1.13e-28!9;UBERON:0000125!1.13e-28!9;UBERON:0002791!1.32e-27!33;UBERON:0002780!4.16e-25!41;UBERON:0001890!4.16e-25!41;UBERON:0006240!4.16e-25!41;UBERON:0003080!1.90e-24!42;UBERON:0001049!1.40e-22!57;UBERON:0005068!1.40e-22!57;UBERON:0006241!1.40e-22!57;UBERON:0007135!1.40e-22!57;UBERON:0002616!1.06e-21!59;UBERON:0002420!2.87e-21!9;UBERON:0007245!2.87e-21!9;UBERON:0010009!2.87e-21!9;UBERON:0010011!2.87e-21!9;UBERON:0000454!2.87e-21!9;UBERON:0009663!1.72e-19!7;UBERON:0000955!9.18e-18!69;UBERON:0006238!9.18e-18!69;UBERON:0002619!6.74e-17!22;UBERON:0002771!3.21e-16!3;UBERON:0003056!5.73e-16!61;UBERON:0001871!6.15e-16!7;UBERON:0007023!1.57e-15!115;UBERON:0000956!8.94e-15!25;UBERON:0000203!8.94e-15!25;UBERON:0001950!1.10e-14!20;UBERON:0001017!1.92e-14!82;UBERON:0000200!4.70e-14!6;UBERON:0003075!8.09e-14!86;UBERON:0007284!8.09e-14!86;UBERON:0005743!1.28e-13!86;UBERON:0002346!4.74e-13!90;UBERON:0000369!5.64e-13!4;UBERON:0002435!5.64e-13!4;UBERON:0000204!5.64e-13!4;UBERON:0010082!5.64e-13!4;UBERON:0000073!5.11e-12!94;UBERON:0001016!5.11e-12!94;UBERON:0001875!5.22e-12!2;UBERON:0006514!5.22e-12!2;UBERON:0002148!1.62e-11!2;UBERON:0009662!1.62e-11!2;UBERON:0000349!3.07e-10!5;UBERON:0000033!9.35e-10!123;UBERON:0000153!3.90e-09!129;UBERON:0007811!3.90e-09!129;UBERON:0005383!2.76e-08!3;UBERON:0005382!2.76e-08!3;UBERON:0000988!5.84e-08!3;UBERON:0006331!5.84e-08!3;UBERON:0001282!4.58e-07!1;UBERON:0009842!4.58e-07!1;UBERON:0003704!4.58e-07!1;UBERON:0001171!4.58e-07!1;UBERON:0001172!4.58e-07!1;UBERON:0001874!5.13e-07!1;UBERON:0001301!5.43e-07!1;UBERON:0001882!8.03e-07!1;UBERON:0005403!8.03e-07!1 | |ontology_enrichment_uberon=UBERON:0002020!3.16e-35!34;UBERON:0003528!3.16e-35!34;UBERON:0001869!7.71e-33!32;UBERON:0001893!8.89e-31!34;UBERON:0002308!1.13e-28!9;UBERON:0000125!1.13e-28!9;UBERON:0002791!1.32e-27!33;UBERON:0002780!4.16e-25!41;UBERON:0001890!4.16e-25!41;UBERON:0006240!4.16e-25!41;UBERON:0003080!1.90e-24!42;UBERON:0001049!1.40e-22!57;UBERON:0005068!1.40e-22!57;UBERON:0006241!1.40e-22!57;UBERON:0007135!1.40e-22!57;UBERON:0002616!1.06e-21!59;UBERON:0002420!2.87e-21!9;UBERON:0007245!2.87e-21!9;UBERON:0010009!2.87e-21!9;UBERON:0010011!2.87e-21!9;UBERON:0000454!2.87e-21!9;UBERON:0009663!1.72e-19!7;UBERON:0000955!9.18e-18!69;UBERON:0006238!9.18e-18!69;UBERON:0002619!6.74e-17!22;UBERON:0002771!3.21e-16!3;UBERON:0003056!5.73e-16!61;UBERON:0001871!6.15e-16!7;UBERON:0007023!1.57e-15!115;UBERON:0000956!8.94e-15!25;UBERON:0000203!8.94e-15!25;UBERON:0001950!1.10e-14!20;UBERON:0001017!1.92e-14!82;UBERON:0000200!4.70e-14!6;UBERON:0003075!8.09e-14!86;UBERON:0007284!8.09e-14!86;UBERON:0005743!1.28e-13!86;UBERON:0002346!4.74e-13!90;UBERON:0000369!5.64e-13!4;UBERON:0002435!5.64e-13!4;UBERON:0000204!5.64e-13!4;UBERON:0010082!5.64e-13!4;UBERON:0000073!5.11e-12!94;UBERON:0001016!5.11e-12!94;UBERON:0001875!5.22e-12!2;UBERON:0006514!5.22e-12!2;UBERON:0002148!1.62e-11!2;UBERON:0009662!1.62e-11!2;UBERON:0000349!3.07e-10!5;UBERON:0000033!9.35e-10!123;UBERON:0000153!3.90e-09!129;UBERON:0007811!3.90e-09!129;UBERON:0005383!2.76e-08!3;UBERON:0005382!2.76e-08!3;UBERON:0000988!5.84e-08!3;UBERON:0006331!5.84e-08!3;UBERON:0001282!4.58e-07!1;UBERON:0009842!4.58e-07!1;UBERON:0003704!4.58e-07!1;UBERON:0001171!4.58e-07!1;UBERON:0001172!4.58e-07!1;UBERON:0001874!5.13e-07!1;UBERON:0001301!5.43e-07!1;UBERON:0001882!8.03e-07!1;UBERON:0005403!8.03e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;3.58e-26;1!UBERON:0009842;3.58e-26;1!UBERON:0003704;3.58e-26;1!UBERON:0001171;3.58e-26;1!UBERON:0001172;3.58e-26;1!UBERON:0001874;5.23e-26;1!UBERON:0001301;9.79e-26;1!UBERON:0004175;2.80e-11;21!UBERON:0000058;6.94e-11;10!UBERON:0001280;1.19e-09;3!UBERON:0004647;1.19e-09;3!UBERON:0005383;1.35e-09;3!UBERON:0005382;1.35e-09;3!UBERON:0006947;1.67e-09;3!UBERON:0004054;1.67e-09;3!UBERON:0002394;1.49e-07;4!UBERON:0003928;1.49e-07;4!UBERON:0000369;1.64e-07;4!UBERON:0002435;1.64e-07;4!UBERON:0000204;1.64e-07;4!UBERON:0005904;1.92e-07;4!UBERON:0000995;8.59e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,3.58e-26,1;UBERON:0009842,3.58e-26,1;UBERON:0003704,3.58e-26,1;UBERON:0001171,3.58e-26,1;UBERON:0001172,3.58e-26,1;UBERON:0001874,5.93e-26,1;UBERON:0001301,7.62e-26,1;UBERON:0001280,1.19e-09,3;UBERON:0004647,1.19e-09,3;UBERON:0005171,1.19e-09,3;UBERON:0004175,1.39e-09,25;UBERON:0005383,1.41e-09,3;UBERON:0005382,1.41e-09,3;UBERON:0006947,1.54e-09,3;UBERON:0004054,1.54e-09,3;UBERON:0000369,1.69e-07,4;UBERON:0002435,1.69e-07,4;UBERON:0000204,1.69e-07,4;UBERON:0010082,1.69e-07,4;UBERON:0005904,1.80e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,3.41826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0,0,0,0,0.19871461170299,0.126621591911757,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,2.36598618851383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0,4.57222304153173,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.567545880755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35673384874003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,3.41826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0,0,0,0,0.19871461170299,0.126621591911757,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,2.36598618851383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0,4.57222304153173,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.567545880755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35673384874003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | ||
|short_description=p3@RXFP2 | |short_description=p3@RXFP2 | ||
}} | }} |
Latest revision as of 03:24, 17 September 2015
Short description: | p3@RXFP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RXFP2_5end |
Coexpression cluster: | C3364_mesenchymal_leiomyoma_cholangiocellular_epididymis_hairy_putamen_uterus |
Association with transcript: | -5bp_to_ENST00000380314_5end |
EntrezGene: | RXFP2 |
HGNC: | 17318 |
UniProt: | Q3KU23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 3.58e-26 | 1 |
acinus | 3.58e-26 | 1 |
intrahepatic bile duct | 3.58e-26 | 1 |
portal lobule | 3.58e-26 | 1 |
hepatic acinus | 3.58e-26 | 1 |
putamen | 5.93e-26 | 1 |
epididymis | 7.62e-26 | 1 |
liver parenchyma | 1.19e-09 | 3 |
liver lobule | 1.19e-09 | 3 |
hepatic duct | 1.19e-09 | 3 |
internal genitalia | 1.39e-09 | 25 |
caudate-putamen | 1.41e-09 | 3 |
dorsal striatum | 1.41e-09 | 3 |
male genital duct | 1.54e-09 | 3 |
internal male genitalia | 1.54e-09 | 3 |
corpus striatum | 1.69e-07 | 4 |
striatum | 1.69e-07 | 4 |
ventral part of telencephalon | 1.69e-07 | 4 |
future corpus striatum | 1.69e-07 | 4 |
duct of male reproductive system | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.10e-34 | 3 |
leiomyoma | 9.10e-34 | 3 |
benign neoplasm | 1.26e-25 | 4 |