FFCP PHASE1:Hg19::chr13:36432199..36432209,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_uc001uvi.1_5end | |association_with_transcript=-8bp_to_uc001uvi.1_5end | ||
|cluster_id=chr13:36432199..36432209,+ | |||
|description=CAGE_peak_1_at_uc001uvi.1_5end | |description=CAGE_peak_1_at_uc001uvi.1_5end | ||
|id=chr13:36432199..36432209,+ | |id=chr13:36432199..36432209,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002561;5.99e-41;2!CL:0002559;4.64e-17;5!CL:0000362;6.48e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,4.89e-41,2;CL:0002559,4.28e-17,5;CL:0000362,6.20e-10,9 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.72e-27;3!UBERON:0003057;2.72e-27;3!UBERON:0003918;7.96e-09;10!UBERON:0007687;7.96e-09;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0005933;5.99e-41;2!UBERON:0005942;5.99e-41;2!UBERON:0005932;5.99e-41;2!UBERON:0002240;2.72e-27;3!UBERON:0005174;2.72e-27;3!UBERON:0001137;2.72e-27;3!UBERON:0002038;1.88e-21;1!UBERON:0009661;1.88e-21;1!UBERON:0002950;1.88e-21;1!UBERON:0001891;1.88e-21;1!UBERON:0007195;6.31e-21;1!UBERON:0002073;4.64e-17;5!UBERON:0000489;2.94e-11;29!UBERON:0001896;5.54e-08;3!UBERON:0005290;5.54e-08;3!UBERON:0002106;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,4.89e-41,2;UBERON:0005942,4.89e-41,2;UBERON:0005932,4.89e-41,2;UBERON:0002240,2.08e-27,3;UBERON:0005174,2.08e-27,3;UBERON:0001137,2.08e-27,3;UBERON:0002038,1.88e-21,1;UBERON:0009661,1.88e-21,1;UBERON:0002950,1.88e-21,1;UBERON:0001891,1.88e-21,1;UBERON:0009616,1.88e-21,1;UBERON:0010286,1.88e-21,1;UBERON:0007195,7.72e-21,1;UBERON:0002073,4.28e-17,5;UBERON:0005086,4.28e-17,5;UBERON:0003076,1.35e-12,15;UBERON:0003057,1.35e-12,15;UBERON:0000489,1.45e-10,31;UBERON:0001896,5.93e-08,3;UBERON:0005290,5.93e-08,3;UBERON:0010096,5.93e-08,3;UBERON:0002106,7.26e-08,3;UBERON:0004854,7.26e-08,3;UBERON:0009034,7.26e-08,3;UBERON:0002095,7.26e-08,3;UBERON:0004782,7.26e-08,3;UBERON:0003281,7.26e-08,3;UBERON:0009664,7.26e-08,3;UBERON:0002296,7.26e-08,3;UBERON:0005602,7.26e-08,3;UBERON:0001179,7.26e-08,3;UBERON:0006293,7.26e-08,3;UBERON:0010371,9.16e-07,104 | |||
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| ||
|short_description=p1@uc001uvi.1 | |short_description=p1@uc001uvi.1 | ||
}} | }} |
Latest revision as of 15:47, 24 July 2015
Short description: | p1@uc001uvi.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001uvi.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_uc001uvi.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 4.89e-41 | 2 |
hair follicle cell | 4.28e-17 | 5 |
epidermal cell | 6.20e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 4.89e-41 | 2 |
hair outer root sheath | 4.89e-41 | 2 |
bulb of hair follicle | 4.89e-41 | 2 |
spinal cord | 2.08e-27 | 3 |
dorsal region element | 2.08e-27 | 3 |
dorsum | 2.08e-27 | 3 |
substantia nigra | 1.88e-21 | 1 |
midbrain nucleus | 1.88e-21 | 1 |
regional part of midbrain | 1.88e-21 | 1 |
midbrain | 1.88e-21 | 1 |
presumptive midbrain | 1.88e-21 | 1 |
midbrain neural tube | 1.88e-21 | 1 |
stroma of bone marrow | 7.72e-21 | 1 |
hair follicle | 4.28e-17 | 5 |
hair follicle placode | 4.28e-17 | 5 |
posterior neural tube | 1.35e-12 | 15 |
chordal neural plate | 1.35e-12 | 15 |
cavitated compound organ | 1.45e-10 | 31 |
medulla oblongata | 5.93e-08 | 3 |
myelencephalon | 5.93e-08 | 3 |
future myelencephalon | 5.93e-08 | 3 |
spleen | 7.26e-08 | 3 |
gastrointestinal system mesentery | 7.26e-08 | 3 |
stomach region | 7.26e-08 | 3 |
mesentery | 7.26e-08 | 3 |
gastrointestinal system serosa | 7.26e-08 | 3 |
mesentery of stomach | 7.26e-08 | 3 |
gut mesentery | 7.26e-08 | 3 |
dorsal mesentery | 7.26e-08 | 3 |
dorsal mesogastrium | 7.26e-08 | 3 |
peritoneal cavity | 7.26e-08 | 3 |
spleen primordium | 7.26e-08 | 3 |
ecto-epithelium | 9.16e-07 | 104 |