FFCP PHASE1:Hg19::chr13:42968329..42968343,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:42968329..42968343,+ | |||
|coexpression_cluster_id=C205 | |||
|description=CAGE_peak_at_chr13:42968329..42968343,+ | |description=CAGE_peak_at_chr13:42968329..42968343,+ | ||
|id=chr13:42968329..42968343,+ | |id=chr13:42968329..42968343,+ | ||
|ontology_enrichment_celltype=CL:0002178!5.45e-16!3;CL:0000838!1.06e-13!52;CL:0000542!2.18e-13!53;CL:0000051!2.18e-13!53;CL:0000893!4.30e-11!2;CL:0002489!4.30e-11!2;CL:0000809!4.30e-11!2;CL:0000808!4.30e-11!2;CL:0000894!4.30e-11!2;CL:0000806!4.30e-11!2;CL:0000807!4.30e-11!2;CL:0000805!4.30e-11!2;CL:0002425!4.30e-11!2;CL:0000945!2.07e-09!24;CL:0000826!2.07e-09!24;CL:0000453!4.09e-09!5;CL:0000738!1.79e-08!140;CL:0000988!3.46e-08!182;CL:0000037!5.92e-08!172;CL:0000566!5.92e-08!172;CL:0002032!1.72e-07!165;CL:0000837!1.72e-07!165;CL:0002619!1.99e-07!3;CL:0000084!8.37e-07!25;CL:0000827!8.37e-07!25;CL:0002031!9.24e-07!124 | |ontology_enrichment_celltype=CL:0002178!5.45e-16!3;CL:0000838!1.06e-13!52;CL:0000542!2.18e-13!53;CL:0000051!2.18e-13!53;CL:0000893!4.30e-11!2;CL:0002489!4.30e-11!2;CL:0000809!4.30e-11!2;CL:0000808!4.30e-11!2;CL:0000894!4.30e-11!2;CL:0000806!4.30e-11!2;CL:0000807!4.30e-11!2;CL:0000805!4.30e-11!2;CL:0002425!4.30e-11!2;CL:0000945!2.07e-09!24;CL:0000826!2.07e-09!24;CL:0000453!4.09e-09!5;CL:0000738!1.79e-08!140;CL:0000988!3.46e-08!182;CL:0000037!5.92e-08!172;CL:0000566!5.92e-08!172;CL:0002032!1.72e-07!165;CL:0000837!1.72e-07!165;CL:0002619!1.99e-07!3;CL:0000084!8.37e-07!25;CL:0000827!8.37e-07!25;CL:0002031!9.24e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.81e-19;24!CL:0002178;8.99e-11;3!CL:0000542;8.61e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.09e-19,24;CL:0000826,3.09e-19,24;CL:0000838,6.34e-14,52;CL:0000542,1.14e-13,53;CL:0000051,1.14e-13,53;CL:0002178,7.42e-11,3 | |||
|ontology_enrichment_development_v019=CL:0000051;8.61e-08;53 | |||
|ontology_enrichment_disease=DOID:0060060!9.91e-07!1;DOID:0060061!9.91e-07!1;DOID:8691!9.91e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;7.48e-30;1!DOID:0060061;7.48e-30;1!DOID:8691;7.48e-30;1!DOID:630;1.78e-29;1!DOID:0050177;1.78e-29;1!DOID:0050427;1.78e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,7.48e-30,1;DOID:0060061,7.48e-30,1;DOID:8691,7.48e-30,1;DOID:630,1.33e-29,1;DOID:0050177,1.33e-29,1;DOID:0050427,1.33e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0000945!3.82e-10!8;UBERON:0010039!3.82e-10!8;UBERON:0004177!8.25e-07!7 | |ontology_enrichment_uberon=UBERON:0000945!3.82e-10!8;UBERON:0010039!3.82e-10!8;UBERON:0004177!8.25e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;5.70e-07;5!UBERON:0010039;5.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr13:42968329..42968343,+ | |short_description=p@chr13:42968329..42968343,+ | ||
}} | }} |
Latest revision as of 16:06, 24 July 2015
Short description: | p@chr13:42968329..42968343, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:42968329..42968343, + |
Coexpression cluster: | C205_mycosis_cord_hairy_xeroderma_CD4_B_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.09e-19 | 24 |
pro-B cell | 3.09e-19 | 24 |
lymphoid lineage restricted progenitor cell | 6.34e-14 | 52 |
lymphocyte | 1.14e-13 | 53 |
common lymphoid progenitor | 1.14e-13 | 53 |
epithelial cell of stomach | 7.42e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 7.48e-30 | 1 |
cutaneous T cell lymphoma | 7.48e-30 | 1 |
mycosis fungoides | 7.48e-30 | 1 |
genetic disease | 1.33e-29 | 1 |
monogenic disease | 1.33e-29 | 1 |
xeroderma pigmentosum | 1.33e-29 | 1 |