FFCP PHASE1:Hg19::chr14:106241831..106241872,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:106241831..106241872,- | |||
|coexpression_cluster_id=C99 | |||
|description=CAGE_peak_at_chr14:106241831..106241872,- | |description=CAGE_peak_at_chr14:106241831..106241872,- | ||
|id=chr14:106241831..106241872,- | |id=chr14:106241831..106241872,- | ||
|ontology_enrichment_celltype=CL:0000945!1.35e-55!24;CL:0000826!1.35e-55!24;CL:0000236!1.19e-43!14;CL:0000542!4.19e-32!53;CL:0000051!4.19e-32!53;CL:0000838!1.93e-29!52;CL:0002087!1.91e-20!119;CL:0000738!2.00e-19!140;CL:0000037!7.63e-16!172;CL:0000566!7.63e-16!172;CL:0002031!1.28e-14!124;CL:0000988!1.34e-14!182;CL:0002032!3.60e-14!165;CL:0000837!3.60e-14!165;CL:0000840!4.60e-07!5;CL:0001029!4.60e-07!5 | |ontology_enrichment_celltype=CL:0000945!1.35e-55!24;CL:0000826!1.35e-55!24;CL:0000236!1.19e-43!14;CL:0000542!4.19e-32!53;CL:0000051!4.19e-32!53;CL:0000838!1.93e-29!52;CL:0002087!1.91e-20!119;CL:0000738!2.00e-19!140;CL:0000037!7.63e-16!172;CL:0000566!7.63e-16!172;CL:0002031!1.28e-14!124;CL:0000988!1.34e-14!182;CL:0002032!3.60e-14!165;CL:0000837!3.60e-14!165;CL:0000840!4.60e-07!5;CL:0001029!4.60e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.72e-46;24!CL:0000236;3.20e-35;13!CL:0000542;1.63e-21;53!CL:0000946;6.14e-11;1!CL:0000786;6.14e-11;1!CL:0002087;1.53e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.89e-46,24;CL:0000826,3.89e-46,24;CL:0000236,2.08e-42,14;CL:0000542,4.05e-33,53;CL:0000051,4.05e-33,53;CL:0000838,6.18e-29,52;CL:0002087,1.61e-18,115;CL:0000738,2.72e-15,136;CL:0002031,3.44e-13,120;CL:0000037,6.57e-12,168;CL:0000988,3.56e-11,177;CL:0002032,7.32e-11,161;CL:0000837,7.32e-11,161;CL:0000946,7.46e-11,1;CL:0000786,7.46e-11,1;CL:0000980,7.46e-11,1 | |||
|ontology_enrichment_development_v019=CL:0000051;1.63e-21;53!UBERON:0001045;1.21e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:12603;2.79e-11;1!DOID:0060060;6.14e-11;1!DOID:0060061;6.14e-11;1!DOID:8691;6.14e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,2.79e-11,1;DOID:0060060,5.05e-11,1;DOID:0060061,5.05e-11,1;DOID:8691,5.05e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!6.21e-10!7;UBERON:0000178!9.59e-10!15;UBERON:0000179!9.59e-10!15;UBERON:0000463!9.59e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.54e-19;2!UBERON:0005058;1.54e-19;2!UBERON:0009113;1.54e-19;2!UBERON:0002372;3.76e-11;1!UBERON:0001961;3.76e-11;1!UBERON:0001744;3.76e-11;1!UBERON:0001042;3.76e-11;1!UBERON:0001735;3.76e-11;1!UBERON:0001154;1.21e-10;1!UBERON:0001153;1.21e-10;1!UBERON:0009854;1.21e-10;1!UBERON:0004177;2.24e-08;5!UBERON:0005057;2.24e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,3.76e-11,1;UBERON:0001961,3.76e-11,1;UBERON:0001744,3.76e-11,1;UBERON:0001735,3.76e-11,1;UBERON:0001154,8.22e-11,1;UBERON:0001153,8.22e-11,1;UBERON:0001045,8.22e-11,1;UBERON:0002370,3.44e-10,4;UBERON:0005058,3.44e-10,4;UBERON:0009113,3.44e-10,4;UBERON:0003295,3.44e-10,4;UBERON:0005562,3.44e-10,4;UBERON:0001042,4.76e-09,10;UBERON:0009145,4.76e-09,10;UBERON:0006562,2.85e-08,11;UBERON:0003351,4.44e-07,6 | |||
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| ||
|short_description=p@chr14:106241831..106241872,- | |short_description=p@chr14:106241831..106241872,- | ||
}} | }} |
Latest revision as of 18:39, 24 July 2015
Short description: | p@chr14:106241831..106241872, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:106241831..106241872, - |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.89e-46 | 24 |
pro-B cell | 3.89e-46 | 24 |
B cell | 2.08e-42 | 14 |
lymphocyte | 4.05e-33 | 53 |
common lymphoid progenitor | 4.05e-33 | 53 |
lymphoid lineage restricted progenitor cell | 6.18e-29 | 52 |
nongranular leukocyte | 1.61e-18 | 115 |
leukocyte | 2.72e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 3.44e-13 | 120 |
hematopoietic stem cell | 6.57e-12 | 168 |
hematopoietic cell | 3.56e-11 | 177 |
hematopoietic oligopotent progenitor cell | 7.32e-11 | 161 |
hematopoietic multipotent progenitor cell | 7.32e-11 | 161 |
antibody secreting cell | 7.46e-11 | 1 |
plasma cell | 7.46e-11 | 1 |
plasmablast | 7.46e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
tonsil | 3.76e-11 | 1 |
mucosa-associated lymphoid tissue | 3.76e-11 | 1 |
lymphoid tissue | 3.76e-11 | 1 |
tonsillar ring | 3.76e-11 | 1 |
vermiform appendix | 8.22e-11 | 1 |
caecum | 8.22e-11 | 1 |
midgut | 8.22e-11 | 1 |
thymus | 3.44e-10 | 4 |
hemolymphoid system gland | 3.44e-10 | 4 |
thymic region | 3.44e-10 | 4 |
pharyngeal gland | 3.44e-10 | 4 |
thymus primordium | 3.44e-10 | 4 |
chordate pharynx | 4.76e-09 | 10 |
pharyngeal region of foregut | 4.76e-09 | 10 |
pharynx | 2.85e-08 | 11 |
pharyngeal epithelium | 4.44e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 2.79e-11 | 1 |
non-Hodgkin lymphoma | 5.05e-11 | 1 |
cutaneous T cell lymphoma | 5.05e-11 | 1 |
mycosis fungoides | 5.05e-11 | 1 |