FFCP PHASE1:Hg19::chr14:50459621..50459636,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:50459621..50459636,- | |||
|coexpression_cluster_id=C99 | |||
|description=CAGE_peak_at_chr14:50459621..50459636,- | |description=CAGE_peak_at_chr14:50459621..50459636,- | ||
|id=chr14:50459621..50459636,- | |id=chr14:50459621..50459636,- | ||
|ontology_enrichment_celltype=CL:0000359!3.74e-12!32;CL:0000192!1.47e-09!42;CL:0000514!1.47e-09!42;CL:0000453!3.28e-08!5;CL:0000680!7.01e-08!57;CL:0000056!7.01e-08!57;CL:0000355!7.01e-08!57;CL:0002539!1.15e-07!10;CL:0002592!1.17e-07!3 | |ontology_enrichment_celltype=CL:0000359!3.74e-12!32;CL:0000192!1.47e-09!42;CL:0000514!1.47e-09!42;CL:0000453!3.28e-08!5;CL:0000680!7.01e-08!57;CL:0000056!7.01e-08!57;CL:0000355!7.01e-08!57;CL:0002539!1.15e-07!10;CL:0002592!1.17e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000511;1.10e-10;1!CL:0002625;1.10e-10;1!CL:0000216;1.10e-10;1!CL:0000453;1.57e-08;5!CL:0002551;2.73e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,8.22e-11,1;CL:0002625,8.22e-11,1;CL:0000216,8.22e-11,1;CL:0000453,1.32e-08,5;CL:0002551,3.15e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;2.79e-11;1!DOID:0060060;3.24e-11;1!DOID:0060061;3.24e-11;1!DOID:8691;3.24e-11;1!DOID:5093;1.15e-10;4!DOID:1612;1.15e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.79e-11,1;DOID:0060060,3.08e-11,1;DOID:0060061,3.08e-11,1;DOID:8691,3.08e-11,1;DOID:5093,1.10e-10,4;DOID:1612,1.10e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0004573!3.46e-10!33;UBERON:0004571!3.46e-10!33;UBERON:0000914!6.69e-09!83;UBERON:0002329!6.69e-09!83;UBERON:0003077!6.69e-09!83;UBERON:0003059!6.69e-09!83;UBERON:0007282!6.69e-09!83;UBERON:0009618!6.69e-09!83;UBERON:0007285!6.69e-09!83;UBERON:0002100!1.15e-08!216;UBERON:0004290!1.83e-08!70;UBERON:0004237!1.15e-07!10;UBERON:0004695!1.15e-07!10;UBERON:0002111!1.15e-07!10;UBERON:0004178!1.15e-07!10;UBERON:0001621!1.17e-07!3;UBERON:0000486!2.72e-07!82;UBERON:0001637!2.83e-07!42;UBERON:0003509!2.83e-07!42;UBERON:0004572!2.83e-07!42;UBERON:0001134!4.38e-07!61;UBERON:0002036!4.38e-07!61;UBERON:0003082!4.38e-07!61;UBERON:0002385!9.97e-07!63;UBERON:0001015!9.97e-07!63;UBERON:0000383!9.97e-07!63 | |ontology_enrichment_uberon=UBERON:0004573!3.46e-10!33;UBERON:0004571!3.46e-10!33;UBERON:0000914!6.69e-09!83;UBERON:0002329!6.69e-09!83;UBERON:0003077!6.69e-09!83;UBERON:0003059!6.69e-09!83;UBERON:0007282!6.69e-09!83;UBERON:0009618!6.69e-09!83;UBERON:0007285!6.69e-09!83;UBERON:0002100!1.15e-08!216;UBERON:0004290!1.83e-08!70;UBERON:0004237!1.15e-07!10;UBERON:0004695!1.15e-07!10;UBERON:0002111!1.15e-07!10;UBERON:0004178!1.15e-07!10;UBERON:0001621!1.17e-07!3;UBERON:0000486!2.72e-07!82;UBERON:0001637!2.83e-07!42;UBERON:0003509!2.83e-07!42;UBERON:0004572!2.83e-07!42;UBERON:0001134!4.38e-07!61;UBERON:0002036!4.38e-07!61;UBERON:0003082!4.38e-07!61;UBERON:0002385!9.97e-07!63;UBERON:0001015!9.97e-07!63;UBERON:0000383!9.97e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0005795;5.30e-11;1!UBERON:0001136;1.10e-10;1!UBERON:0001343;1.10e-10;1!UBERON:0004910;1.10e-10;1!UBERON:0004813;1.10e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,8.22e-11,1;UBERON:0001343,8.22e-11,1;UBERON:0004910,8.22e-11,1;UBERON:0005154,8.22e-11,1;UBERON:0005295,8.22e-11,1;UBERON:0004813,8.22e-11,1;UBERON:0005297,8.22e-11,1;UBERON:0005294,8.22e-11,1;UBERON:0010141,8.22e-11,1;UBERON:0005891,8.22e-11,1 | |||
|phase1_expression=0,0,0.845726424575827,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.382067028739756,0.57470412614962,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1216007683032,1.1409436430889,0.747243402759005,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0.45071417671979,0,0,0.427114777637135,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,1.44331342025273,0.231860809950154,0,0,0,0,2.37061319387782,3.43394464837949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,1.85938219718914,0.31481234683064,0.6970372701606,0.308033580176089,1.06461206063404,0,0.74129687641568,0.286249773483982,0,0,0,0,0,0,0.78494864019923,0,0,0,0.606547444719948,1.58510321173008,0.421258456238981,0,2.19342140668156,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0.246169610922139,11.8195043311487,0,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,1.23120413606075,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370691816839509,0,0.134802265961354,0,0,0,0,1.21390189767046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1804963250039,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.340776043570843,0,0.439656701034247,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.318593534327405,0.899606224327209,0.155262956876259,0,0,1.5652351854352,0,0,0.813741466409323,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33832370607266,1.86010776438708,0.981392365535065,0,0,0,4.99968489637325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,4.10262423315381,0.47775168788705,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.322289439867886,0.89947040332436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44137706989443,0,0,0.320568492303233 | |phase1_expression=0,0,0.845726424575827,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.382067028739756,0.57470412614962,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1216007683032,1.1409436430889,0.747243402759005,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0.45071417671979,0,0,0.427114777637135,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,1.44331342025273,0.231860809950154,0,0,0,0,2.37061319387782,3.43394464837949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,1.85938219718914,0.31481234683064,0.6970372701606,0.308033580176089,1.06461206063404,0,0.74129687641568,0.286249773483982,0,0,0,0,0,0,0.78494864019923,0,0,0,0.606547444719948,1.58510321173008,0.421258456238981,0,2.19342140668156,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0.246169610922139,11.8195043311487,0,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,1.23120413606075,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370691816839509,0,0.134802265961354,0,0,0,0,1.21390189767046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1804963250039,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.340776043570843,0,0.439656701034247,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.318593534327405,0.899606224327209,0.155262956876259,0,0,1.5652351854352,0,0,0.813741466409323,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33832370607266,1.86010776438708,0.981392365535065,0,0,0,4.99968489637325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,4.10262423315381,0.47775168788705,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.322289439867886,0.89947040332436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44137706989443,0,0,0.320568492303233 | ||
|short_description=p@chr14:50459621..50459636,- | |short_description=p@chr14:50459621..50459636,- | ||
}} | }} |
Latest revision as of 20:50, 24 July 2015
Short description: | p@chr14:50459621..50459636, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:50459621..50459636, - |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 8.22e-11 | 1 |
seminiferous tubule epithelial cell | 8.22e-11 | 1 |
Sertoli cell | 8.22e-11 | 1 |
Langerhans cell | 1.32e-08 | 5 |
fibroblast of dermis | 3.15e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 8.22e-11 | 1 |
seminiferous tubule of testis | 8.22e-11 | 1 |
epithelium of male gonad | 8.22e-11 | 1 |
epithelial cord | 8.22e-11 | 1 |
sex cord | 8.22e-11 | 1 |
seminiferous tubule epithelium | 8.22e-11 | 1 |
testis sex cord | 8.22e-11 | 1 |
genital ridge | 8.22e-11 | 1 |
primitive sex cord of indifferent gonad | 8.22e-11 | 1 |
coelomic epithelium | 8.22e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.79e-11 | 1 |
non-Hodgkin lymphoma | 3.08e-11 | 1 |
cutaneous T cell lymphoma | 3.08e-11 | 1 |
mycosis fungoides | 3.08e-11 | 1 |
thoracic cancer | 1.10e-10 | 4 |
breast cancer | 1.10e-10 | 4 |