FFCP PHASE1:Hg19::chr11:33183007..33183046,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:33183007..33183046,-
|short_description=p1@CSTF3
|description=CAGE_peak_1_at_CSTF3_5end
|association_with_transcript=0bp_to_ENST00000323959,ENST0000043174...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1479 | |EntrezGene=1479 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2485 | |HGNC=2485 | ||
|UniProt=Q12996, | |TSSclassifier=strong | ||
|UniProt=Q12996,E9PB40,E9PNK2,F5H0G6,Q96QK4 | |||
|association_with_transcript=0bp_to_ENST00000323959,ENST00000431742,ENST00000524556,ENST00000537832,NM_001033505,NM_001033506,NM_001326,uc001muh.2,uc001mui.2,uc001muj.2_5end | |||
|cluster_id=chr11:33183007..33183046,- | |||
|description=CAGE_peak_1_at_CSTF3_5end | |||
|id=chr11:33183007..33183046,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!5.04e-17!239;DOID:162!5.36e-17!235;DOID:0050687!8.85e-10!143;DOID:305!4.38e-08!106;DOID:0050686!5.51e-08!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,5.04e-17,239;DOID:162,5.36e-17,235;DOID:0050687,8.85e-10,143;DOID:305,4.38e-08,106;DOID:0050686,5.51e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.56e-19!94;UBERON:0001016!2.56e-19!94;UBERON:0001017!3.20e-19!82;UBERON:0005743!6.96e-19!86;UBERON:0000955!2.48e-16!69;UBERON:0006238!2.48e-16!69;UBERON:0000924!1.55e-14!173;UBERON:0006601!1.55e-14!173;UBERON:0004121!1.65e-14!169;UBERON:0001049!2.02e-14!57;UBERON:0005068!2.02e-14!57;UBERON:0006241!2.02e-14!57;UBERON:0007135!2.02e-14!57;UBERON:0000033!9.10e-14!123;UBERON:0002780!1.21e-13!41;UBERON:0001890!1.21e-13!41;UBERON:0006240!1.21e-13!41;UBERON:0002616!3.53e-13!59;UBERON:0003080!5.91e-13!42;UBERON:0000153!6.03e-13!129;UBERON:0007811!6.03e-13!129;UBERON:0003075!2.75e-12!86;UBERON:0007284!2.75e-12!86;UBERON:0002020!3.48e-12!34;UBERON:0003528!3.48e-12!34;UBERON:0002346!3.61e-12!90;UBERON:0001869!9.40e-12!32;UBERON:0001893!2.50e-11!34;UBERON:0002791!2.64e-11!33;UBERON:0003056!3.66e-11!61;UBERON:0000956!6.94e-10!25;UBERON:0000203!6.94e-10!25;UBERON:0002619!2.76e-08!22;UBERON:0000119!5.95e-08!312;UBERON:0000483!1.58e-07!309;UBERON:0001950!2.49e-07!20;UBERON:0000475!5.15e-07!365;UBERON:0000481!5.86e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;4.62e-11;32!UBERON:0003528;5.00e-11;34!UBERON:0002020;5.00e-11;34!UBERON:0001869;5.06e-11;32!UBERON:0002780;3.68e-10;41!UBERON:0001890;3.68e-10;41!UBERON:0001893;5.42e-10;34!UBERON:0000956;6.54e-10;25!UBERON:0000203;6.54e-10;25!UBERON:0000073;2.08e-08;53!UBERON:0002616;2.08e-08;53!UBERON:0000955;2.31e-08;68!UBERON:0002619;2.60e-08;22!UBERON:0001017;2.76e-08;75!UBERON:0001016;6.86e-08;83!UBERON:0001950;2.42e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.73e-20,89;UBERON:0001017,8.43e-20,81;UBERON:0000955,6.58e-17,68;UBERON:0006238,6.58e-17,68;UBERON:0001049,5.00e-15,56;UBERON:0005068,5.00e-15,56;UBERON:0006241,5.00e-15,56;UBERON:0007135,5.00e-15,56;UBERON:0004121,5.59e-14,171;UBERON:0000924,5.59e-14,171;UBERON:0006601,5.59e-14,171;UBERON:0000073,6.78e-14,53;UBERON:0002616,6.78e-14,53;UBERON:0002780,1.21e-13,41;UBERON:0001890,1.21e-13,41;UBERON:0003080,1.21e-13,41;UBERON:0006240,1.21e-13,41;UBERON:0003528,3.48e-12,34;UBERON:0002020,3.48e-12,34;UBERON:0003075,8.16e-12,82;UBERON:0007284,8.16e-12,82;UBERON:0002791,8.43e-12,32;UBERON:0001869,9.40e-12,32;UBERON:0002346,1.08e-11,86;UBERON:0011216,1.76e-11,223;UBERON:0003056,2.34e-11,61;UBERON:0001893,2.50e-11,34;UBERON:0010314,5.46e-11,132;UBERON:0010371,1.73e-10,104;UBERON:0000956,6.94e-10,25;UBERON:0000203,6.94e-10,25;UBERON:0002619,2.76e-08,22;UBERON:0000119,1.65e-07,309;UBERON:0001950,2.49e-07,20;UBERON:0000483,4.24e-07,306 | |||
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| ||
|short_description=p1@CSTF3 | |||
}} | }} |
Latest revision as of 16:24, 17 September 2015
Short description: | p1@CSTF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CSTF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000323959, ENST00000431742, ENST00000524556, ENST00000537832, NM_001033505, NM_001033506, NM_001326, uc001muh.2, uc001mui.2, uc001muj.2_5end |
EntrezGene: | CSTF3 |
HGNC: | 2485 |
UniProt: | Q12996E9PB40E9PNK2F5H0G6Q96QK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.04e-17 | 239 |
cancer | 5.36e-17 | 235 |
cell type cancer | 8.85e-10 | 143 |
carcinoma | 4.38e-08 | 106 |
organ system cancer | 5.51e-08 | 137 |