FFCP PHASE1:Hg19::chr15:39486515..39486531,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000560743_5end | |association_with_transcript=-5bp_to_ENST00000560743_5end | ||
|cluster_id=chr15:39486515..39486531,- | |||
|coexpression_cluster_id=C878 | |||
|description=CAGE_peak_3_at_ENST00000560743_5end | |description=CAGE_peak_3_at_ENST00000560743_5end | ||
|id=chr15:39486515..39486531,- | |id=chr15:39486515..39486531,- | ||
|ontology_enrichment_celltype=CL:0000057!7.17e-29!75;CL:0002620!3.83e-22!23;CL:0000055!4.02e-13!180;CL:0002580!3.99e-12!3;CL:0002579!1.66e-11!3;CL:0002334!1.46e-10!12;CL:0000197!2.26e-09!6;CL:0000098!2.26e-09!6;CL:0002167!2.26e-09!6;CL:0002617!1.23e-08!2;CL:1000306!3.07e-08!4;CL:0002547!3.07e-08!4 | |ontology_enrichment_celltype=CL:0000057!7.17e-29!75;CL:0002620!3.83e-22!23;CL:0000055!4.02e-13!180;CL:0002580!3.99e-12!3;CL:0002579!1.66e-11!3;CL:0002334!1.46e-10!12;CL:0000197!2.26e-09!6;CL:0000098!2.26e-09!6;CL:0002167!2.26e-09!6;CL:0002617!1.23e-08!2;CL:1000306!3.07e-08!4;CL:0002547!3.07e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002580;1.02e-28;3!CL:0002617;1.03e-19;2!CL:0000136;1.11e-17;13!CL:0002620;1.58e-13;23!CL:0002615;2.11e-13;3!CL:0002334;8.97e-13;12!CL:0000511;2.87e-10;1!CL:0002625;2.87e-10;1!CL:0000216;2.87e-10;1!CL:0002616;2.87e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.07e-28,3;CL:0002617,1.03e-19,2;CL:0000136,2.53e-15,15;CL:0000057,3.45e-15,76;CL:0002620,2.12e-13,23;CL:0002615,2.18e-13,3;CL:0002334,9.12e-13,12;CL:0002616,2.50e-10,1;CL:0000511,2.74e-10,1;CL:0002625,2.74e-10,1;CL:0000216,2.74e-10,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.54e-11!5;DOID:450!2.54e-11!5;DOID:66!2.54e-11!5;DOID:423!2.54e-11!5;DOID:0080000!2.54e-11!5;DOID:11722!2.54e-11!5 | |||
|ontology_enrichment_disease_v019=DOID:2513;1.24e-10;1!DOID:3571;1.50e-10;1!DOID:4235;2.87e-10;1!DOID:17;4.53e-08;5!DOID:450;4.53e-08;5!DOID:66;4.53e-08;5!DOID:423;4.53e-08;5!DOID:0080000;4.53e-08;5!DOID:11722;4.53e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.19e-10,1;DOID:3571,1.43e-10,1;DOID:4235,1.73e-10,1;DOID:17,4.37e-08,5;DOID:450,4.37e-08,5;DOID:66,4.37e-08,5;DOID:423,4.37e-08,5;DOID:0080000,4.37e-08,5;DOID:11722,4.37e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!8.23e-16!40;UBERON:0003688!2.99e-15!6;UBERON:0002358!2.99e-15!6;UBERON:0003684!2.99e-15!6;UBERON:0001178!2.99e-15!6;UBERON:0002199!1.18e-13!45;UBERON:0002416!1.18e-13!45;UBERON:0000310!2.61e-09!10;UBERON:0001443!2.01e-08!11;UBERON:0000415!3.07e-08!4;UBERON:0007240!3.07e-08!4;UBERON:0005742!3.07e-08!4;UBERON:0005734!3.07e-08!4;UBERON:0004664!3.07e-08!4;UBERON:0004663!3.07e-08!4;UBERON:0004457!2.00e-07!12;UBERON:0000042!2.00e-07!12;UBERON:0003102!2.48e-07!95 | |ontology_enrichment_uberon=UBERON:0002097!8.23e-16!40;UBERON:0003688!2.99e-15!6;UBERON:0002358!2.99e-15!6;UBERON:0003684!2.99e-15!6;UBERON:0001178!2.99e-15!6;UBERON:0002199!1.18e-13!45;UBERON:0002416!1.18e-13!45;UBERON:0000310!2.61e-09!10;UBERON:0001443!2.01e-08!11;UBERON:0000415!3.07e-08!4;UBERON:0007240!3.07e-08!4;UBERON:0005742!3.07e-08!4;UBERON:0005734!3.07e-08!4;UBERON:0004664!3.07e-08!4;UBERON:0004663!3.07e-08!4;UBERON:0004457!2.00e-07!12;UBERON:0000042!2.00e-07!12;UBERON:0003102!2.48e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.63e-23;10!UBERON:0001443;3.49e-21;11!UBERON:0003688;1.18e-14;6!UBERON:0002358;1.18e-14;6!UBERON:0003684;1.18e-14;6!UBERON:0001178;1.18e-14;6!UBERON:0002097;7.29e-11;41!UBERON:0001136;2.87e-10;1!UBERON:0001343;2.87e-10;1!UBERON:0004910;2.87e-10;1!UBERON:0004813;2.87e-10;1!UBERON:0004457;6.00e-10;9!UBERON:0000042;6.00e-10;9!UBERON:0002199;1.46e-09;46!UBERON:0002416;1.46e-09;46!UBERON:0003102;2.43e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.69e-23,10;UBERON:0001443,3.57e-21,11;UBERON:0003688,1.21e-14,6;UBERON:0002358,1.21e-14,6;UBERON:0003684,1.21e-14,6;UBERON:0001178,1.21e-14,6;UBERON:0002097,6.52e-13,41;UBERON:0002199,2.10e-11,46;UBERON:0002416,2.10e-11,46;UBERON:0001136,2.74e-10,1;UBERON:0001343,2.74e-10,1;UBERON:0004910,2.74e-10,1;UBERON:0005154,2.74e-10,1;UBERON:0005295,2.74e-10,1;UBERON:0004813,2.74e-10,1;UBERON:0005297,2.74e-10,1;UBERON:0005294,2.74e-10,1;UBERON:0010141,2.74e-10,1;UBERON:0005891,2.74e-10,1;UBERON:0004457,1.42e-07,12;UBERON:0000042,1.42e-07,12 | |||
|phase1_expression=4.1786027232228,4.92431204949261,2.39622486963151,6.00439790118782,0,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0.926864265692532,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,1.83892677479412,0.600952235626387,0,1.79389635688862,1.49490172172997,0.423863802319124,0,0.206105058476878,1.54584324027377,1.11670113798954,0.168776332241266,1.07180705677318,0.252433774244115,1.10459878370759,0.323292113637624,0,0.604512589365842,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.892144943985809,0.630809660135739,1.40569697991256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2254015016441,13.9650395692137,4.2099014164961,0.896974044789907,10.7458522304008,0.804269605718038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.42143546427988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86919826156599,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=4.1786027232228,4.92431204949261,2.39622486963151,6.00439790118782,0,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0.926864265692532,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,1.83892677479412,0.600952235626387,0,1.79389635688862,1.49490172172997,0.423863802319124,0,0.206105058476878,1.54584324027377,1.11670113798954,0.168776332241266,1.07180705677318,0.252433774244115,1.10459878370759,0.323292113637624,0,0.604512589365842,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.892144943985809,0.630809660135739,1.40569697991256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2254015016441,13.9650395692137,4.2099014164961,0.896974044789907,10.7458522304008,0.804269605718038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.42143546427988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86919826156599,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@ENST00000560743 | |short_description=p3@ENST00000560743 | ||
}} | }} |
Latest revision as of 01:09, 25 July 2015
Short description: | p3@ENST00000560743 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000560743_5end |
Coexpression cluster: | C878_Preadipocyte_Adipocyte_Mast_CD14_CD8_CD4_Fibroblast |
Association with transcript: | -5bp_to_ENST00000560743_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.07e-28 | 3 |
adipocyte of breast | 1.03e-19 | 2 |
fat cell | 2.53e-15 | 15 |
fibroblast | 3.45e-15 | 76 |
skin fibroblast | 2.12e-13 | 23 |
adipocyte of omentum tissue | 2.18e-13 | 3 |
preadipocyte | 9.12e-13 | 12 |
perirenal adipocyte cell | 2.50e-10 | 1 |
androgen binding protein secreting cell | 2.74e-10 | 1 |
seminiferous tubule epithelial cell | 2.74e-10 | 1 |
Sertoli cell | 2.74e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
breast | 2.69e-23 | 10 |
chest | 3.57e-21 | 11 |
omentum | 1.21e-14 | 6 |
peritoneum | 1.21e-14 | 6 |
abdominal cavity | 1.21e-14 | 6 |
visceral peritoneum | 1.21e-14 | 6 |
skin of body | 6.52e-13 | 41 |
integument | 2.10e-11 | 46 |
integumental system | 2.10e-11 | 46 |
mesothelium | 2.74e-10 | 1 |
seminiferous tubule of testis | 2.74e-10 | 1 |
epithelium of male gonad | 2.74e-10 | 1 |
epithelial cord | 2.74e-10 | 1 |
sex cord | 2.74e-10 | 1 |
seminiferous tubule epithelium | 2.74e-10 | 1 |
testis sex cord | 2.74e-10 | 1 |
genital ridge | 2.74e-10 | 1 |
primitive sex cord of indifferent gonad | 2.74e-10 | 1 |
coelomic epithelium | 2.74e-10 | 1 |
cavity lining | 1.42e-07 | 12 |
serous membrane | 1.42e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.19e-10 | 1 |
liver cancer | 1.43e-10 | 1 |
spindle cell sarcoma | 1.73e-10 | 1 |
musculoskeletal system disease | 4.37e-08 | 5 |
myotonic disease | 4.37e-08 | 5 |
muscle tissue disease | 4.37e-08 | 5 |
myopathy | 4.37e-08 | 5 |
muscular disease | 4.37e-08 | 5 |
myotonic dystrophy | 4.37e-08 | 5 |