FFCP PHASE1:Hg19::chr15:76304731..76304779,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=145957 | |EntrezGene=145957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29862 | |HGNC=29862 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJI7 | |UniProt=E9PJI7 | ||
|association_with_transcript=0bp_to_ENST00000461391,uc010bkn.2_5end | |association_with_transcript=0bp_to_ENST00000461391,uc010bkn.2_5end | ||
|cluster_id=chr15:76304731..76304779,- | |||
|description=CAGE_peak_1_at_NRG4_5end | |description=CAGE_peak_1_at_NRG4_5end | ||
|id=chr15:76304731..76304779,- | |id=chr15:76304731..76304779,- | ||
|ontology_enrichment_celltype=CL:0000223!9.95e-07!59 | |ontology_enrichment_celltype=CL:0000223!9.95e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.81e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.43e-16;29 | |||
|ontology_enrichment_disease=DOID:305!6.46e-17!106;DOID:0050687!3.04e-16!143;DOID:162!2.37e-14!235;DOID:14566!6.68e-14!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.04e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.48e-21,106;DOID:162,3.69e-16,235;DOID:0050687,5.21e-16,143;DOID:14566,1.63e-15,239;DOID:1749,1.09e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004921!3.02e-14!129;UBERON:0004185!3.02e-14!129;UBERON:0004119!7.22e-14!169;UBERON:0000925!7.22e-14!169;UBERON:0006595!7.22e-14!169;UBERON:0001007!6.67e-13!155;UBERON:0001555!6.67e-13!155;UBERON:0007026!6.67e-13!155;UBERON:0000077!1.09e-11!130;UBERON:0001737!5.12e-11!9;UBERON:0001557!9.49e-10!19;UBERON:0001041!2.20e-09!98;UBERON:0001004!1.82e-08!72;UBERON:0000072!6.92e-08!46;UBERON:0000065!1.03e-07!53 | |ontology_enrichment_uberon=UBERON:0004921!3.02e-14!129;UBERON:0004185!3.02e-14!129;UBERON:0004119!7.22e-14!169;UBERON:0000925!7.22e-14!169;UBERON:0006595!7.22e-14!169;UBERON:0001007!6.67e-13!155;UBERON:0001555!6.67e-13!155;UBERON:0007026!6.67e-13!155;UBERON:0000077!1.09e-11!130;UBERON:0001737!5.12e-11!9;UBERON:0001557!9.49e-10!19;UBERON:0001041!2.20e-09!98;UBERON:0001004!1.82e-08!72;UBERON:0000072!6.92e-08!46;UBERON:0000065!1.03e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.72e-20;9!UBERON:0001557;1.72e-20;9!UBERON:0000072;1.36e-10;37!UBERON:0000065;3.43e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.48e-20,9;UBERON:0004921,3.54e-14,118;UBERON:0001007,2.60e-13,145;UBERON:0001555,2.60e-13,145;UBERON:0007026,2.60e-13,145;UBERON:0001557,1.10e-12,19;UBERON:0001041,2.14e-12,87;UBERON:0004119,7.15e-12,160;UBERON:0000925,7.15e-12,160;UBERON:0006595,7.15e-12,160;UBERON:0008947,1.49e-11,38;UBERON:0003258,1.49e-11,38;UBERON:0000072,4.79e-11,47;UBERON:0000065,5.16e-09,54;UBERON:0001004,6.64e-09,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.0787107813136792,0,0.767658796194425,0.154816123316076,0,0.6024118375565,0,0,0,0.587200878669695,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0,0.28769239232215,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0,0.641858054152187,0,0,0.398927315243264,0,0,0,0,0.502497330513487,0,0.217188844705117,0,1.10483290796269,0.316462387440884,0.211255286311942,0,0,0.336985893439485,0,0.964353520182481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,9.93777120334689,11.632343615389,7.95336398615491,9.59557562771827,8.93305720778865,9.25355414533277,15.9100943628994,10.792180581894,5.77120735419586,0,0,0,0,5.07020139287323,1.96565443335525,4.13552934676983,0,0.245976877086227,0.171567810298526,0.439001141634502,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0.234004265139238,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0.871533458600294,1.3996218765488,0,0,0,0,0,0,0,0,0,3.47463946379935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0.241718899183244,1.00253235151642,0.184161977871793,0,0,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.330569830721956,0.192190067365106,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,2.16530741786592,1.29151611801369,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,11.0268097191464,0,0,0,0,2.19537308576098,1.1490322207942,0.423347165447766,0,4.7735520279288,1.14117339516596,0.626719583092093,0,0,3.21176150207399,0.605399121573143,13.2012333684001,3.09154810280188,0,0,0,0.781552381608161,0,0,0,0,0,0.37428108081644,0.439524537815682,0.728163130497081,0,0,8.83354593529453,5.93929361665277,26.7229810826332,0.994147647766298,0.844016498463076,0,0,0,0.597743964753209,0.828851746593443,0,0,0.369254416383208,0,0,0.358042349351218,0,1.7755813014648,0,0,0,0,0,0,0,0,14.2241810356875,0,13.2377101790044,0.344743373241465,0,0,0,0,0,0,0,0,9.15083093559517,6.69233972537296,0.461701551022782,0.455768223388005,0.23056390438806,0,3.80265801727028,6.38002319463839,0.183195186803725,3.19820865611181,0,0,0,2.03036094555463,0.980312671588698,1.51039428278258,0,0,0,0,0.282706142867882,7.14082511148901,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0,0.802577647298789,0,0,2.15231080825299,0,0,9.67925728389311,0,0.31593289814244,0,1.03688191397247,0,0.330991955875499,0.941798755221676,0,0.853828638089378,0,0,15.1888215992285,0,2.44617335538842,0,24.963133472584,19.8072049303563,21.5142497479408,1.84279131327997,0,0.677942222341597,0,0,0,4.30213042016567,1.28254112402454,0,0.599428828746391,3.31407959454444,0,0.686379991447858,0,0,23.5694034616795,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,4.79229601197579,0,0,0,0,0,0,0,0,26.2801375644379,0.0846733320657845,0,0.408610218334727,0,0,0,0,0,0,8.72130187758092,0.551639951094387,0.104909176269996,0,6.09576953731672,0,0,0,0,0,0,0,0,0,0,0.79318464064088,2.05173127149315,0,0,0,7.86999454267915,7.75296524548339,0,0,0,0,0,0,7.66009509324218,0,0,0.919036730290385,0.655745261419609,0.942324577501406,0,0,0,0,0,0.248385611765534,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20206087197775,1.14241563650639,0,0,0.322231671127465,0,0,0,0,0,0,0,1.71553273099941,0,2.26705925512272,0,0,0,0,0.438568099157414,0,0,0.168942440653073,0,0,0.607719912354764,0,0,0,0,0.327609848846413,8.60205180638018,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.247871528518004,0,0,0,8.0057074828547,0,0,0,0,0,0,0,0,0,1.42769420259154,43.1849961404513,7.07818340086442,0.366857197043358,0.115525666150338,0,0,0,0.150420656698515,0.40341013740704,49.2353827076848,0,0,0.443568258651136,0,0,0,0,0,1.09651553371436,1.48863353516788,0,6.00483409906098,0,0.336283722218824,0,0.455324382702595,0.354809480650555,0.115233987555779,0,0.0679697329768317,0,8.86453806629762,0.111231401892069,1.88383422841234,0,0,0,0,0,0.0714765441766563,0,0.813689977576877,5.56346471368254,0,0,0,0,2.58136415292167,0,0.0852134047591577,0,0.9164274741762,0,0,0,0.098150233615243,0,2.58971534875158,3.79852385368114,0,0,0,0,0,1.01651473835064,0,0.150962843566674,0,0,9.87666322359198,0.245148321753905,5.89191367754065,1.17785080268967,0,1.6906229103336,0,0,0,0,12.3202217637904,0,0,24.1011008121351,0,0,0.157771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| ||
|short_description=p1@NRG4 | |short_description=p1@NRG4 | ||
}} | }} |
Latest revision as of 04:34, 19 September 2015
Short description: | p1@NRG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NRG4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000461391, uc010bkn.2_5end |
EntrezGene: | NRG4 |
HGNC: | 29862 |
UniProt: | E9PJI7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.81e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.48e-20 | 9 |
subdivision of digestive tract | 3.54e-14 | 118 |
digestive system | 2.60e-13 | 145 |
digestive tract | 2.60e-13 | 145 |
primitive gut | 2.60e-13 | 145 |
upper respiratory tract | 1.10e-12 | 19 |
foregut | 2.14e-12 | 87 |
endoderm-derived structure | 7.15e-12 | 160 |
endoderm | 7.15e-12 | 160 |
presumptive endoderm | 7.15e-12 | 160 |
respiratory primordium | 1.49e-11 | 38 |
endoderm of foregut | 1.49e-11 | 38 |
segment of respiratory tract | 4.79e-11 | 47 |
respiratory tract | 5.16e-09 | 54 |
respiratory system | 6.64e-09 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.48e-21 | 106 |
cancer | 3.69e-16 | 235 |
cell type cancer | 5.21e-16 | 143 |
disease of cellular proliferation | 1.63e-15 | 239 |
squamous cell carcinoma | 1.09e-07 | 14 |