FFCP PHASE1:Hg19::chr16:12633220..12633234,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:12633220..12633234,+ | |||
|coexpression_cluster_id=C144 | |||
|description=CAGE_peak_at_chr16:12633220..12633234,+ | |description=CAGE_peak_at_chr16:12633220..12633234,+ | ||
|id=chr16:12633220..12633234,+ | |id=chr16:12633220..12633234,+ | ||
|ontology_enrichment_celltype=CL:0000838!8.41e-26!52;CL:0000542!3.21e-25!53;CL:0000051!3.21e-25!53;CL:0000084!7.47e-17!25;CL:0000827!7.47e-17!25;CL:0000945!3.87e-12!24;CL:0000826!3.87e-12!24;CL:0002087!8.66e-12!119;CL:0000624!4.42e-11!6;CL:0002031!5.50e-10!124;CL:0000791!8.44e-10!18;CL:0000789!8.44e-10!18;CL:0002420!8.44e-10!18;CL:0002419!8.44e-10!18;CL:0000790!8.44e-10!18;CL:0000738!3.08e-09!140;CL:0000988!1.79e-07!182 | |ontology_enrichment_celltype=CL:0000838!8.41e-26!52;CL:0000542!3.21e-25!53;CL:0000051!3.21e-25!53;CL:0000084!7.47e-17!25;CL:0000827!7.47e-17!25;CL:0000945!3.87e-12!24;CL:0000826!3.87e-12!24;CL:0002087!8.66e-12!119;CL:0000624!4.42e-11!6;CL:0002031!5.50e-10!124;CL:0000791!8.44e-10!18;CL:0000789!8.44e-10!18;CL:0002420!8.44e-10!18;CL:0002419!8.44e-10!18;CL:0000790!8.44e-10!18;CL:0000738!3.08e-09!140;CL:0000988!1.79e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.95e-15;24!CL:0000898;4.76e-15;3!CL:0000946;1.25e-11;1!CL:0000895;1.25e-11;1!CL:0000786;1.25e-11;1!CL:0000542;1.05e-10;53!CL:0000624;5.64e-08;6!CL:0000084;6.01e-07;25!CL:0000815;9.96e-07;2!CL:0000792;9.96e-07;2!CL:0002677;9.96e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.02e-18,52;CL:0000542,2.44e-18,53;CL:0000051,2.44e-18,53;CL:0000945,2.73e-15,24;CL:0000826,2.73e-15,24;CL:0000898,5.68e-15,3;CL:0000946,9.61e-12,1;CL:0000786,9.61e-12,1;CL:0000980,9.61e-12,1;CL:0000810,1.63e-11,1;CL:0000895,1.63e-11,1;CL:0002436,1.63e-11,1;CL:0002427,1.63e-11,1;CL:0002428,1.63e-11,1;CL:0002429,1.63e-11,1;CL:0002433,1.63e-11,1;CL:0002431,1.63e-11,1;CL:0002432,1.63e-11,1;CL:0000624,6.16e-08,6;CL:0002087,1.25e-07,115;CL:0002031,2.94e-07,120;CL:0000084,6.06e-07,25;CL:0000827,6.06e-07,25;CL:0000815,9.96e-07,2;CL:0000792,9.96e-07,2;CL:0002677,9.96e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002427;1.25e-11;1!UBERON:0001045;1.25e-11;1!CL:0000051;1.05e-10;53 | |||
|ontology_enrichment_disease=DOID:0060058!6.62e-10!10 | |ontology_enrichment_disease=DOID:0060058!6.62e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:630;7.35e-12;1!DOID:0050177;7.35e-12;1!DOID:0050427;7.35e-12;1!DOID:0060060;1.25e-11;1!DOID:0060061;1.25e-11;1!DOID:8691;1.25e-11;1!DOID:0060058;3.75e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,7.76e-12,1;DOID:0050177,7.76e-12,1;DOID:0050427,7.76e-12,1;DOID:0060060,1.07e-11,1;DOID:0060061,1.07e-11,1;DOID:8691,1.07e-11,1;DOID:0060058,3.52e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!6.29e-14!7;UBERON:0002106!9.53e-13!3;UBERON:0004854!9.53e-13!3;UBERON:0009034!9.53e-13!3;UBERON:0002095!9.53e-13!3;UBERON:0004782!9.53e-13!3;UBERON:0003281!9.53e-13!3;UBERON:0009664!9.53e-13!3;UBERON:0002296!9.53e-13!3;UBERON:0005602!9.53e-13!3;UBERON:0001179!9.53e-13!3;UBERON:0006293!9.53e-13!3 | |ontology_enrichment_uberon=UBERON:0004177!6.29e-14!7;UBERON:0002106!9.53e-13!3;UBERON:0004854!9.53e-13!3;UBERON:0009034!9.53e-13!3;UBERON:0002095!9.53e-13!3;UBERON:0004782!9.53e-13!3;UBERON:0003281!9.53e-13!3;UBERON:0009664!9.53e-13!3;UBERON:0002296!9.53e-13!3;UBERON:0005602!9.53e-13!3;UBERON:0001179!9.53e-13!3;UBERON:0006293!9.53e-13!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.25e-11;1!UBERON:0001154;1.25e-11;1!UBERON:0001153;1.25e-11;1!UBERON:0009854;1.25e-11;1!UBERON:0001961;1.25e-11;1!UBERON:0001744;1.25e-11;1!UBERON:0001042;1.25e-11;1!UBERON:0001735;1.25e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.19e-11,1;UBERON:0001153,1.19e-11,1;UBERON:0001045,1.19e-11,1;UBERON:0002372,1.32e-11,1;UBERON:0001961,1.32e-11,1;UBERON:0001744,1.32e-11,1;UBERON:0001735,1.32e-11,1;UBERON:0004177,6.02e-07,7;UBERON:0005057,6.02e-07,7 | |||
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| ||
|short_description=p@chr16:12633220..12633234,+ | |short_description=p@chr16:12633220..12633234,+ | ||
}} | }} |
Latest revision as of 06:19, 25 July 2015
Short description: | p@chr16:12633220..12633234, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:12633220..12633234, + |
Coexpression cluster: | C144_CD4_tonsil_NK_appendix_CD8_splenic_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.19e-11 | 1 |
caecum | 1.19e-11 | 1 |
midgut | 1.19e-11 | 1 |
tonsil | 1.32e-11 | 1 |
mucosa-associated lymphoid tissue | 1.32e-11 | 1 |
lymphoid tissue | 1.32e-11 | 1 |
tonsillar ring | 1.32e-11 | 1 |
hemopoietic organ | 6.02e-07 | 7 |
immune organ | 6.02e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.76e-12 | 1 |
monogenic disease | 7.76e-12 | 1 |
xeroderma pigmentosum | 7.76e-12 | 1 |
non-Hodgkin lymphoma | 1.07e-11 | 1 |
cutaneous T cell lymphoma | 1.07e-11 | 1 |
mycosis fungoides | 1.07e-11 | 1 |
lymphoma | 3.52e-10 | 10 |