FFCP PHASE1:Hg19::chr11:65307327..65307343,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:65307327..65307343,-
|short_description=p@chr11:65307327..65307343,-
|description=CAGE_peak_at_chr11:65307327..65307343,-
|association_with_transcript=NA
...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:65307327..65307343,- | |||
|description=CAGE_peak_at_chr11:65307327..65307343,- | |||
|id=chr11:65307327..65307343,- | |||
|ontology_enrichment_celltype=CL:0000066!8.16e-12!254;CL:0002076!1.22e-10!43;CL:0002368!3.61e-08!13;CL:0000240!9.44e-08!6;CL:0000311!9.44e-08!6;CL:0000079!9.44e-08!6;CL:0000237!9.44e-08!6;CL:0000036!9.44e-08!6;CL:0000357!9.44e-08!6;CL:0000114!9.44e-08!6;CL:0000312!6.63e-07!5;CL:0002159!8.62e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.74e-11;3!CL:0000349;1.43e-10;19!CL:0000575;1.63e-08;2!CL:0000123;4.36e-08;2!CL:0000242;4.36e-08;2!CL:0002536;1.68e-07;2!CL:0000312;4.64e-07;5!CL:0002537;4.88e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.61e-15,253;CL:0002577,1.91e-11,3;CL:0000349,1.65e-10,19;CL:0000575,1.60e-08,2;CL:0000242,3.66e-08,2;CL:0002536,2.87e-07,2;CL:0002537,4.15e-07,5;CL:0000312,4.24e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.47e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:5093;3.85e-08;4!DOID:1612;3.85e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.13e-13,106;DOID:0050687,4.51e-10,143;DOID:5093,2.27e-08,4;DOID:1612,2.27e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.66e-09!14;UBERON:0000158!4.66e-09!14;UBERON:0000064!8.05e-09!219;UBERON:0004119!1.10e-07!169;UBERON:0000925!1.10e-07!169;UBERON:0006595!1.10e-07!169;UBERON:0001004!8.62e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;3.00e-12;7!UBERON:0000478;3.02e-10;24!UBERON:0001987;1.03e-08;4!UBERON:0005631;1.78e-08;10!UBERON:0000158;1.78e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.46e-15,14;UBERON:0000158,9.46e-15,14;UBERON:0000305,3.65e-12,7;UBERON:0004871,1.32e-10,8;UBERON:0000478,3.47e-10,24;UBERON:0001987,1.10e-08,4;UBERON:0004340,1.10e-08,4;UBERON:0000995,1.93e-07,21;UBERON:0005795,4.68e-07,22;UBERON:0003975,4.68e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.09340350391728,1.09220686065086,1.05506791291381,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0.919421224478927,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,3.64295288292542,7.04490441290416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0.773043412653187,0.818238361772504,0.286804595389004,0.487894824518382,0.662648841607426,0.348581828608555,0.829288440122964,1.26160425437814,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.658501712451753,5.62008766288098,0.904760751704678,0.648119116109707,0,0,0,0,0,0,0,0,2.37061319387782,1.71697232418975,0,0,0.148631162288728,0,0.503946384596579,0,0,0,0.383382679165211,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0.117141414992713,0,0,0,0,0.368738337083406,0,0,0,0.206768026122887,0,0.106727557803444,54.2598352888804,3.32870879020994,1.20956117331872,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0.116210378459959,0,1.00253235151642,0.276242966807689,0,0,0,1.35359883872224,0.0770153371044148,0,1.46139224653261,0,0,0,0,0,0,0,0.509752546090077,0,0.671624264166535,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0.214840489736547,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,1.34060455107157,0,0,0,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18138918693974,0,0,0,0,6.68484557265532,1.78178808499583,5.52889263778618,0,0.140669416410513,0,0.16480387422676,0,0,0,0.755798243562828,0,0,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,1.92411999991631,0,11.606931725121,2.03402920234213,2.6002644994473,2.41320361269025,0,0,0,0.60298219312704,0,0,0,0.219385397153973,0,0.278847488557207,0.0769502585037971,0,0,0,0,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0.242780379534093,0.789168805698781,2.41981432097328,0.61214552326098,0,0,0,0,0,0,0,1.13843818411917,0,0,0.293977192243133,7.13885493959301,0.34945333648406,0,0,0,0,0.484945082442097,0,0,0,0,0.0633107959558787,5.86654148204409,0.240476460754601,1.70762395791482,0.19980960958213,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,1.92555211236127,2.07720169014593,0,3.0952078182318,0.182248669974074,0,0,0.472091293214983,0,0,4.60596473566669,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0.414239055347196,0,0.988058159489721,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40500471742064,7.97065657359538,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.857766365499703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11312123358627,0,0,0,0,0,7.97313194000834,1.24415452006595,0,0,0,0,0.169732529954025,0,0,0,0,0,4.80342448971282,0,0,0.128458450192919,0,0,0.205116364240755,0,0.138314504928436,0,0,0,2.83127336034577,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0.548257766857182,0.496211178389294,0,1.14986184875636,0,0,0.606965604236632,1.82129753081038,0,0,0,0,0.0657727735628491,0.118193840883968,1.55723962648897,0,0.628462359664008,0,0.913158720509496,0,0,0,0.158013611732727,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0.423387050190929,5.9567785821453,0,0,0,8.53907032452614,0.975343399858155,0,0,0,0.971421986118279,3.27515248846948,0,0,0.33883824611688,0,0,0.231522474323834,0,0.470317296361523,0,56.5623713043902,0,0,0,0,0.0939839179798536,0.193373663920732,0,0.535661815816973,0,0,0.730336388246517,0.458729283404541,0,0,0.407948941145488,0,0,0.371995018166751,0,0,0,0,0,1.32585478664576,0,0,1.0028301571695,0.0757786982182394,0.267964130156178,0,0,1.27940389140589,0,0,0.0620747142958579,0.224263725161227,0.0636471582781649,0.202117188958219,2.61260097476354,1.02669990325584,0.875576689189638,0.0717222053926763,0.99798106963804,0.0814032686109745,1.92109222579888,0,0,2.34640942403454,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.09340350391728,1.09220686065086,1.05506791291381,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0.919421224478927,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,3.64295288292542,7.04490441290416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0.773043412653187,0.818238361772504,0.286804595389004,0.487894824518382,0.662648841607426,0.348581828608555,0.829288440122964,1.26160425437814,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.658501712451753,5.62008766288098,0.904760751704678,0.648119116109707,0,0,0,0,0,0,0,0,2.37061319387782,1.71697232418975,0,0,0.148631162288728,0,0.503946384596579,0,0,0,0.383382679165211,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0.117141414992713,0,0,0,0,0.368738337083406,0,0,0,0.206768026122887,0,0.106727557803444,54.2598352888804,3.32870879020994,1.20956117331872,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0.116210378459959,0,1.00253235151642,0.276242966807689,0,0,0,1.35359883872224,0.0770153371044148,0,1.46139224653261,0,0,0,0,0,0,0,0.509752546090077,0,0.671624264166535,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0.214840489736547,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,1.34060455107157,0,0,0,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18138918693974,0,0,0,0,6.68484557265532,1.78178808499583,5.52889263778618,0,0.140669416410513,0,0.16480387422676,0,0,0,0.755798243562828,0,0,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,1.92411999991631,0,11.606931725121,2.03402920234213,2.6002644994473,2.41320361269025,0,0,0,0.60298219312704,0,0,0,0.219385397153973,0,0.278847488557207,0.0769502585037971,0,0,0,0,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0.242780379534093,0.789168805698781,2.41981432097328,0.61214552326098,0,0,0,0,0,0,0,1.13843818411917,0,0,0.293977192243133,7.13885493959301,0.34945333648406,0,0,0,0,0.484945082442097,0,0,0,0,0.0633107959558787,5.86654148204409,0.240476460754601,1.70762395791482,0.19980960958213,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,1.92555211236127,2.07720169014593,0,3.0952078182318,0.182248669974074,0,0,0.472091293214983,0,0,4.60596473566669,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0.414239055347196,0,0.988058159489721,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40500471742064,7.97065657359538,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.857766365499703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11312123358627,0,0,0,0,0,7.97313194000834,1.24415452006595,0,0,0,0,0.169732529954025,0,0,0,0,0,4.80342448971282,0,0,0.128458450192919,0,0,0.205116364240755,0,0.138314504928436,0,0,0,2.83127336034577,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0.548257766857182,0.496211178389294,0,1.14986184875636,0,0,0.606965604236632,1.82129753081038,0,0,0,0,0.0657727735628491,0.118193840883968,1.55723962648897,0,0.628462359664008,0,0.913158720509496,0,0,0,0.158013611732727,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0.423387050190929,5.9567785821453,0,0,0,8.53907032452614,0.975343399858155,0,0,0,0.971421986118279,3.27515248846948,0,0,0.33883824611688,0,0,0.231522474323834,0,0.470317296361523,0,56.5623713043902,0,0,0,0,0.0939839179798536,0.193373663920732,0,0.535661815816973,0,0,0.730336388246517,0.458729283404541,0,0,0.407948941145488,0,0,0.371995018166751,0,0,0,0,0,1.32585478664576,0,0,1.0028301571695,0.0757786982182394,0.267964130156178,0,0,1.27940389140589,0,0,0.0620747142958579,0.224263725161227,0.0636471582781649,0.202117188958219,2.61260097476354,1.02669990325584,0.875576689189638,0.0717222053926763,0.99798106963804,0.0814032686109745,1.92109222579888,0,0,2.34640942403454,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr11:65307327..65307343,- | |||
}} | }} |
Latest revision as of 00:41, 24 July 2015
Short description: | p@chr11:65307327..65307343, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65307327..65307343, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.61e-15 | 253 |
placental epithelial cell | 1.91e-11 | 3 |
extraembryonic cell | 1.65e-10 | 19 |
corneal epithelial cell | 1.60e-08 | 2 |
Merkel cell | 3.66e-08 | 2 |
amniotic epithelial cell | 2.87e-07 | 2 |
amnion mesenchymal stem cell | 4.15e-07 | 5 |
keratinocyte | 4.24e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.46e-15 | 14 |
membranous layer | 9.46e-15 | 14 |
amnion | 3.65e-12 | 7 |
somatic layer of lateral plate mesoderm | 1.32e-10 | 8 |
extraembryonic structure | 3.47e-10 | 24 |
placenta | 1.10e-08 | 4 |
allantois | 1.10e-08 | 4 |
uterus | 1.93e-07 | 21 |
embryonic uterus | 4.68e-07 | 22 |
internal female genitalia | 4.68e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.13e-13 | 106 |
cell type cancer | 4.51e-10 | 143 |
thoracic cancer | 2.27e-08 | 4 |
breast cancer | 2.27e-08 | 4 |