FFCP PHASE1:Hg19::chr11:66313492..66313546,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:66313492..66313546,-
|short_description=p1@ZDHHC24
|description=CAGE_peak_1_at_ZDHHC24_5end
|association_with_transcript=0bp_to_ENST00000534073_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=254359 | |EntrezGene=254359 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27387 | |HGNC=27387 | ||
|TSSclassifier=strong | |||
|UniProt=E9PI61 | |UniProt=E9PI61 | ||
|association_with_transcript=0bp_to_ENST00000534073_5end | |||
|cluster_id=chr11:66313492..66313546,- | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_1_at_ZDHHC24_5end | |||
|id=chr11:66313492..66313546,- | |||
|ontology_enrichment_celltype=CL:0000222!4.87e-18!119;CL:0000220!1.05e-14!246;CL:0002321!6.95e-14!248;CL:0000066!2.73e-12!254;CL:0000213!7.35e-11!57;CL:0000215!7.35e-11!57;CL:0000012!6.77e-10!682;CL:0002078!6.90e-10!44;CL:0000548!2.08e-09!679;CL:0000004!2.08e-09!679;CL:0000255!2.08e-09!679;CL:0000115!2.61e-09!35;CL:0000192!2.73e-09!42;CL:0000514!2.73e-09!42;CL:0000144!3.30e-09!625;CL:0000183!3.33e-09!59;CL:0000359!4.41e-09!32;CL:0002371!8.23e-09!591;CL:0000003!2.78e-08!722;CL:0000680!1.23e-07!57;CL:0000056!1.23e-07!57;CL:0000355!1.23e-07!57;CL:0000187!2.76e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.86e-09;32!CL:0000115;4.12e-08;36!CL:0002078;1.11e-07;45!CL:0000192;3.68e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.12e-18,121;CL:0002321,3.25e-14,250;CL:0000066,3.14e-12,253;CL:0000213,3.51e-11,58;CL:0000215,3.51e-11,58;CL:0002078,3.25e-10,45;CL:0000115,1.21e-09,36;CL:0000192,2.82e-09,43;CL:0000514,2.82e-09,43;CL:0000359,4.41e-09,32;CL:0000680,1.17e-07,58;CL:0000056,1.17e-07,58;CL:0000355,1.17e-07,58;CL:0000187,2.62e-07,55;CL:0000076,4.13e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000514;3.68e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.46e-12!79;UBERON:0007798!1.46e-12!79;UBERON:0000055!4.63e-12!69;UBERON:0001637!4.35e-11!42;UBERON:0003509!4.35e-11!42;UBERON:0004572!4.35e-11!42;UBERON:0003914!9.55e-11!118;UBERON:0004872!1.02e-10!84;UBERON:0001981!1.29e-10!60;UBERON:0007500!1.29e-10!60;UBERON:0004537!1.29e-10!60;UBERON:0006965!1.29e-10!60;UBERON:0004573!8.54e-10!33;UBERON:0004571!8.54e-10!33;UBERON:0004535!6.75e-09!110;UBERON:0002100!7.42e-09!216;UBERON:0001009!1.56e-08!113;UBERON:0009569!1.21e-07!113;UBERON:0000490!3.48e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.40e-09;33!UBERON:0004571;4.40e-09;33!UBERON:0001637;1.77e-08;42!UBERON:0003509;1.77e-08;42!UBERON:0004572;1.77e-08;42!UBERON:0003914;1.21e-07;74!UBERON:0000055;3.90e-07;65!UBERON:0007500;4.37e-07;56!UBERON:0001981;4.37e-07;56!UBERON:0004537;4.37e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.28e-12,78;UBERON:0007798,2.28e-12,78;UBERON:0000055,7.24e-12,68;UBERON:0001637,4.35e-11,42;UBERON:0003509,4.35e-11,42;UBERON:0004572,4.35e-11,42;UBERON:0003914,1.05e-10,117;UBERON:0004872,1.57e-10,83;UBERON:0007500,1.99e-10,59;UBERON:0001981,1.99e-10,59;UBERON:0004537,1.99e-10,59;UBERON:0006965,1.99e-10,59;UBERON:0004573,8.54e-10,33;UBERON:0004571,8.54e-10,33;UBERON:0002100,3.99e-09,199;UBERON:0004535,9.95e-09,109;UBERON:0001009,2.28e-08,112;UBERON:0003104,1.62e-07,160;UBERON:0009142,1.62e-07,160;UBERON:0007503,1.64e-07,78;UBERON:0000490,2.51e-07,148;UBERON:0009569,2.63e-07,112 | |||
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| ||
|short_description=p1@ZDHHC24 | |||
}} | }} |
Latest revision as of 14:43, 19 September 2015
Short description: | p1@ZDHHC24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZDHHC24_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_ENST00000534073_5end |
EntrezGene: | ZDHHC24 |
HGNC: | 27387 |
UniProt: | E9PI61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.12e-18 | 121 |
embryonic cell | 3.25e-14 | 250 |
epithelial cell | 3.14e-12 | 253 |
lining cell | 3.51e-11 | 58 |
barrier cell | 3.51e-11 | 58 |
meso-epithelial cell | 3.25e-10 | 45 |
endothelial cell | 1.21e-09 | 36 |
smooth muscle cell | 2.82e-09 | 43 |
smooth muscle myoblast | 2.82e-09 | 43 |
vascular associated smooth muscle cell | 4.41e-09 | 32 |
muscle precursor cell | 1.17e-07 | 58 |
myoblast | 1.17e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.17e-07 | 58 |
muscle cell | 2.62e-07 | 55 |
squamous epithelial cell | 4.13e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.28e-12 | 78 |
vascular system | 2.28e-12 | 78 |
vessel | 7.24e-12 | 68 |
artery | 4.35e-11 | 42 |
arterial blood vessel | 4.35e-11 | 42 |
arterial system | 4.35e-11 | 42 |
epithelial tube | 1.05e-10 | 117 |
splanchnic layer of lateral plate mesoderm | 1.57e-10 | 83 |
epithelial tube open at both ends | 1.99e-10 | 59 |
blood vessel | 1.99e-10 | 59 |
blood vasculature | 1.99e-10 | 59 |
vascular cord | 1.99e-10 | 59 |
systemic artery | 8.54e-10 | 33 |
systemic arterial system | 8.54e-10 | 33 |
trunk | 3.99e-09 | 199 |
cardiovascular system | 9.95e-09 | 109 |
circulatory system | 2.28e-08 | 112 |
mesenchyme | 1.62e-07 | 160 |
entire embryonic mesenchyme | 1.62e-07 | 160 |
epithelial vesicle | 1.64e-07 | 78 |
unilaminar epithelium | 2.51e-07 | 148 |
subdivision of trunk | 2.63e-07 | 112 |