FFCP PHASE1:Hg19::chr11:69457929..69457972,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:69457929..69457972,+
|short_description=p@chr11:69457929..69457972,+
|description=CAGE_peak_at_chr11:69457929..69457972,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:69457929..69457972,+ | |||
|coexpression_cluster_id=C1350 | |||
|description=CAGE_peak_at_chr11:69457929..69457972,+ | |||
|id=chr11:69457929..69457972,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.64e-24!180;CL:0002321!3.46e-20!248;CL:0000220!5.91e-20!246;CL:0000192!4.31e-13!42;CL:0000514!4.31e-13!42;CL:0000359!8.55e-13!32;CL:0000222!1.28e-12!119;CL:0000057!6.43e-12!75;CL:0000680!2.55e-11!57;CL:0000056!2.55e-11!57;CL:0000355!2.55e-11!57;CL:0000548!3.30e-11!679;CL:0000004!3.30e-11!679;CL:0000255!3.30e-11!679;CL:0000012!1.51e-10!682;CL:0000187!2.77e-10!54;CL:0000183!5.24e-10!59;CL:0000144!8.62e-09!625;CL:0000393!1.17e-08!60;CL:0000211!1.17e-08!60;CL:0000066!2.07e-08!254;CL:0002334!7.80e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.11e-13;32!CL:0000192;3.76e-09;43!CL:0002334;1.12e-08;12!CL:0002539;6.31e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.79e-14,32;CL:0000057,3.43e-12,76;CL:0000192,4.57e-12,43;CL:0000514,4.57e-12,43;CL:0002321,1.25e-11,250;CL:0000222,4.01e-10,121;CL:0000680,1.99e-09,58;CL:0000056,1.99e-09,58;CL:0000355,1.99e-09,58;CL:0002334,7.57e-09,12;CL:0000187,3.15e-08,55;CL:0002539,4.87e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;3.76e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.80e-17!143;UBERON:0002100!2.14e-16!216;UBERON:0000055!6.83e-15!69;UBERON:0001637!1.30e-13!42;UBERON:0003509!1.30e-13!42;UBERON:0004572!1.30e-13!42;UBERON:0000914!1.82e-13!83;UBERON:0002329!1.82e-13!83;UBERON:0003077!1.82e-13!83;UBERON:0003059!1.82e-13!83;UBERON:0007282!1.82e-13!83;UBERON:0009618!1.82e-13!83;UBERON:0007285!1.82e-13!83;UBERON:0001981!2.53e-13!60;UBERON:0007500!2.53e-13!60;UBERON:0004537!2.53e-13!60;UBERON:0006965!2.53e-13!60;UBERON:0002049!4.14e-13!79;UBERON:0007798!4.14e-13!79;UBERON:0003914!1.91e-12!118;UBERON:0004290!4.02e-12!70;UBERON:0000486!7.80e-12!82;UBERON:0003102!8.16e-12!95;UBERON:0000490!9.96e-12!138;UBERON:0000475!1.05e-11!365;UBERON:0004573!2.10e-11!33;UBERON:0004571!2.10e-11!33;UBERON:0004872!2.41e-10!84;UBERON:0001134!5.59e-10!61;UBERON:0002036!5.59e-10!61;UBERON:0003082!5.59e-10!61;UBERON:0000468!7.07e-10!659;UBERON:0002385!8.89e-10!63;UBERON:0001015!8.89e-10!63;UBERON:0000383!8.89e-10!63;UBERON:0003104!2.17e-09!238;UBERON:0009142!2.17e-09!238;UBERON:0002199!4.43e-08!45;UBERON:0002416!4.43e-08!45;UBERON:0004923!5.51e-07!57;UBERON:0002097!9.71e-07!40;UBERON:0005156!9.83e-07!59;UBERON:0000990!9.83e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.10e-11;33!UBERON:0004571;7.10e-11;33!UBERON:0001637;2.80e-10;42!UBERON:0003509;2.80e-10;42!UBERON:0004572;2.80e-10;42!UBERON:0000310;5.18e-07;10!UBERON:0004237;6.31e-07;10!UBERON:0004695;6.31e-07;10!UBERON:0002111;6.31e-07;10!UBERON:0004178;6.31e-07;10!UBERON:0007500;9.92e-07;56!UBERON:0001981;9.92e-07;56!UBERON:0004537;9.92e-07;56 | |||
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| ||
|short_description=p@chr11:69457929..69457972,+ | |||
}} | }} |
Latest revision as of 01:57, 24 July 2015
Short description: | p@chr11:69457929..69457972, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:69457929..69457972, + |
Coexpression cluster: | C1350_neuroectodermal_neuroblastoma_Melanocyte_Smooth_leiomyoma_hepatoma_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.79e-14 | 32 |
fibroblast | 3.43e-12 | 76 |
smooth muscle cell | 4.57e-12 | 43 |
smooth muscle myoblast | 4.57e-12 | 43 |
embryonic cell | 1.25e-11 | 250 |
mesodermal cell | 4.01e-10 | 121 |
muscle precursor cell | 1.99e-09 | 58 |
myoblast | 1.99e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.99e-09 | 58 |
preadipocyte | 7.57e-09 | 12 |
muscle cell | 3.15e-08 | 55 |
aortic smooth muscle cell | 4.87e-07 | 10 |