FFCP PHASE1:Hg19::chr11:69466187..69466212,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:69466187..69466212,+
|short_description=p9@CCND1
|description=CAGE_peak_9_at_CCND1_5end
|association_with_transcript=52bp_to_S71637_5end
|EntrezGene=595
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=595 | |EntrezGene=595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1582 | |HGNC=1582 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_S71637_5end | |||
|cluster_id=chr11:69466187..69466212,+ | |||
|description=CAGE_peak_9_at_CCND1_5end | |||
|id=chr11:69466187..69466212,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.82e-21!180;CL:0000359!1.91e-10!32;CL:0000057!1.88e-09!75;CL:0000192!6.93e-09!42;CL:0000514!6.93e-09!42;CL:0002321!1.10e-08!248;CL:0000220!1.82e-08!246;CL:0000680!1.94e-07!57;CL:0000056!1.94e-07!57;CL:0000355!1.94e-07!57;CL:0000183!2.41e-07!59;CL:0000548!3.33e-07!679;CL:0000004!3.33e-07!679;CL:0000255!3.33e-07!679;CL:0000012!8.28e-07!682;CL:0000144!9.26e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.70e-17;32!CL:0002539;1.24e-10;10!CL:0000192;5.53e-10;43!CL:0002595;5.11e-09;5!CL:0000148;1.87e-08;10!CL:0002567;3.37e-08;3!CL:0000147;1.16e-07;14!CL:0000515;2.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.55e-17,32;CL:0000192,6.82e-12,43;CL:0000514,6.82e-12,43;CL:0000680,5.82e-11,58;CL:0000056,5.82e-11,58;CL:0000355,5.82e-11,58;CL:0002539,9.13e-11,10;CL:0002595,5.29e-09,5;CL:0000148,9.68e-09,10;CL:0000541,9.68e-09,10;CL:0002567,2.20e-08,3;CL:0000187,2.26e-08,55;CL:0000147,5.15e-08,14;CL:0000393,3.73e-07,61;CL:0000211,3.73e-07,61;CL:0000222,6.05e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;5.53e-10;43 | |||
|ontology_enrichment_disease=DOID:2394!5.61e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.38e-08;3!DOID:127;5.38e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.76e-08,3;DOID:127,3.76e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001637!9.36e-11!42;UBERON:0003509!9.36e-11!42;UBERON:0004572!9.36e-11!42;UBERON:0005256!3.47e-09!143;UBERON:0000055!4.49e-09!69;UBERON:0003102!5.51e-09!95;UBERON:0002100!6.57e-09!216;UBERON:0004573!2.82e-08!33;UBERON:0004571!2.82e-08!33;UBERON:0003914!3.25e-08!118;UBERON:0002049!3.35e-08!79;UBERON:0007798!3.35e-08!79;UBERON:0001981!1.03e-07!60;UBERON:0007500!1.03e-07!60;UBERON:0004537!1.03e-07!60;UBERON:0006965!1.03e-07!60;UBERON:0000486!2.13e-07!82;UBERON:0006554!3.96e-07!44;UBERON:0000475!4.57e-07!365;UBERON:0000468!6.99e-07!659;UBERON:0004872!7.26e-07!84;UBERON:0001008!9.97e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.94e-17;33!UBERON:0004571;3.94e-17;33!UBERON:0001637;2.48e-13;42!UBERON:0003509;2.48e-13;42!UBERON:0004572;2.48e-13;42!UBERON:0000947;6.38e-11;21!UBERON:0010191;6.38e-11;21!UBERON:0004237;1.24e-10;10!UBERON:0004695;1.24e-10;10!UBERON:0002111;1.24e-10;10!UBERON:0004178;1.24e-10;10!UBERON:0007500;1.96e-09;56!UBERON:0001981;1.96e-09;56!UBERON:0004537;1.96e-09;56!UBERON:0003513;3.04e-09;7!UBERON:0003834;5.11e-09;5!UBERON:0001533;5.11e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.80e-19,42;UBERON:0003509,1.80e-19,42;UBERON:0004572,1.80e-19,42;UBERON:0004573,3.47e-19,33;UBERON:0004571,3.47e-19,33;UBERON:0007500,3.56e-15,59;UBERON:0001981,3.56e-15,59;UBERON:0004537,3.56e-15,59;UBERON:0006965,3.56e-15,59;UBERON:0000055,1.28e-13,68;UBERON:0004872,2.22e-12,83;UBERON:0000947,4.01e-11,21;UBERON:0010191,4.01e-11,21;UBERON:0002049,4.56e-11,78;UBERON:0007798,4.56e-11,78;UBERON:0004237,9.13e-11,10;UBERON:0004695,9.13e-11,10;UBERON:0002111,9.13e-11,10;UBERON:0004178,9.13e-11,10;UBERON:0002329,2.47e-10,71;UBERON:0003059,2.47e-10,71;UBERON:0007282,2.47e-10,71;UBERON:0004290,2.47e-10,71;UBERON:0009618,2.47e-10,71;UBERON:0003077,4.11e-10,72;UBERON:0007285,4.11e-10,72;UBERON:0005256,4.93e-10,122;UBERON:0001134,6.26e-10,62;UBERON:0002036,6.26e-10,62;UBERON:0003082,6.26e-10,62;UBERON:0007524,6.73e-10,73;UBERON:0002385,1.83e-09,64;UBERON:0001015,1.83e-09,64;UBERON:0000383,1.83e-09,64;UBERON:0003513,3.01e-09,7;UBERON:0003914,4.46e-09,117;UBERON:0000486,5.14e-09,83;UBERON:0003834,5.29e-09,5;UBERON:0001533,5.29e-09,5;UBERON:0007503,6.49e-09,78;UBERON:0002100,3.69e-08,199;UBERON:0003104,7.70e-08,160;UBERON:0009142,7.70e-08,160;UBERON:0004535,8.88e-08,109;UBERON:0000490,1.02e-07,148;UBERON:0001009,2.09e-07,112;UBERON:0000926,7.70e-07,315;UBERON:0004120,7.70e-07,315;UBERON:0006603,7.70e-07,315;UBERON:0001135,8.35e-07,15 | |||
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| ||
|short_description=p9@CCND1 | |||
}} | }} |
Latest revision as of 21:29, 19 September 2015
Short description: | p9@CCND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CCND1_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_S71637_5end |
EntrezGene: | CCND1 |
HGNC: | 1582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.55e-17 | 32 |
smooth muscle cell | 6.82e-12 | 43 |
smooth muscle myoblast | 6.82e-12 | 43 |
muscle precursor cell | 5.82e-11 | 58 |
myoblast | 5.82e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.82e-11 | 58 |
aortic smooth muscle cell | 9.13e-11 | 10 |
smooth muscle cell of the subclavian artery | 5.29e-09 | 5 |
melanocyte | 9.68e-09 | 10 |
melanoblast | 9.68e-09 | 10 |
light melanocyte | 2.20e-08 | 3 |
muscle cell | 2.26e-08 | 55 |
pigment cell | 5.15e-08 | 14 |
electrically responsive cell | 3.73e-07 | 61 |
electrically active cell | 3.73e-07 | 61 |
mesodermal cell | 6.05e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.76e-08 | 3 |
leiomyoma | 3.76e-08 | 3 |