FFCP PHASE1:Hg19::chr21:27423459..27423508,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=351 | |EntrezGene=351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=620 | |HGNC=620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-111bp_to_ENST00000415997_5end | |association_with_transcript=-111bp_to_ENST00000415997_5end | ||
|cluster_id=chr21:27423459..27423508,- | |||
|coexpression_cluster_id=C1073 | |||
|description=CAGE_peak_5_at_APP_5end | |description=CAGE_peak_5_at_APP_5end | ||
|id=chr21:27423459..27423508,- | |id=chr21:27423459..27423508,- | ||
|ontology_enrichment_celltype=CL:0000066!7.37e-09!254 | |ontology_enrichment_celltype=CL:0000066!7.37e-09!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.33e-08,253;CL:0000213,7.11e-07,58;CL:0000215,7.11e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.50e-23!659;UBERON:0000467!8.86e-20!625;UBERON:0007023!1.18e-19!115;UBERON:0000480!2.13e-19!626;UBERON:0001049!5.39e-19!57;UBERON:0005068!5.39e-19!57;UBERON:0006241!5.39e-19!57;UBERON:0007135!5.39e-19!57;UBERON:0000922!1.16e-18!612;UBERON:0001017!1.03e-17!82;UBERON:0005743!4.45e-17!86;UBERON:0000073!5.49e-17!94;UBERON:0001016!5.49e-17!94;UBERON:0002050!7.54e-17!605;UBERON:0005423!7.54e-17!605;UBERON:0000924!9.35e-17!173;UBERON:0006601!9.35e-17!173;UBERON:0004111!1.38e-16!241;UBERON:0000923!1.74e-16!604;UBERON:0005291!1.74e-16!604;UBERON:0006598!1.74e-16!604;UBERON:0002532!1.74e-16!604;UBERON:0004121!3.69e-16!169;UBERON:0002616!4.35e-16!59;UBERON:0002346!1.01e-15!90;UBERON:0000955!1.45e-15!69;UBERON:0006238!1.45e-15!69;UBERON:0002780!1.82e-15!41;UBERON:0001890!1.82e-15!41;UBERON:0006240!1.82e-15!41;UBERON:0000477!2.67e-15!286;UBERON:0003080!2.83e-15!42;UBERON:0003075!3.51e-15!86;UBERON:0007284!3.51e-15!86;UBERON:0002020!2.58e-14!34;UBERON:0003528!2.58e-14!34;UBERON:0000033!3.56e-14!123;UBERON:0000062!8.98e-14!511;UBERON:0001893!1.54e-13!34;UBERON:0000153!2.34e-13!129;UBERON:0007811!2.34e-13!129;UBERON:0002791!3.00e-13!33;UBERON:0001869!5.80e-13!32;UBERON:0002619!2.32e-12!22;UBERON:0000481!7.26e-12!347;UBERON:0000475!2.72e-11!365;UBERON:0000956!4.05e-11!25;UBERON:0000203!4.05e-11!25;UBERON:0001950!4.63e-11!20;UBERON:0003056!1.42e-10!61;UBERON:0000483!3.21e-10!309;UBERON:0000025!4.17e-10!194;UBERON:0000119!4.75e-10!312;UBERON:0000064!4.06e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.24e-13;22!UBERON:0003528;7.50e-13;34!UBERON:0002020;7.50e-13;34!UBERON:0002791;1.06e-12;32!UBERON:0001893;1.39e-12;34!UBERON:0001869;1.50e-12;32!UBERON:0002780;4.11e-12;41!UBERON:0001890;4.11e-12;41!UBERON:0000956;4.21e-12;25!UBERON:0000203;4.21e-12;25!UBERON:0001950;1.09e-11;20!UBERON:0000073;5.96e-11;53!UBERON:0002616;5.96e-11;53!UBERON:0000955;2.98e-07;68!UBERON:0001017;3.22e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.23e-20,56;UBERON:0005068,4.23e-20,56;UBERON:0006241,4.23e-20,56;UBERON:0007135,4.23e-20,56;UBERON:0007023,8.52e-20,114;UBERON:0000073,1.65e-18,53;UBERON:0002616,1.65e-18,53;UBERON:0001017,1.32e-17,81;UBERON:0001016,2.47e-17,89;UBERON:0002780,2.41e-16,41;UBERON:0001890,2.41e-16,41;UBERON:0003080,2.41e-16,41;UBERON:0006240,2.41e-16,41;UBERON:0002346,6.47e-16,86;UBERON:0004111,8.04e-16,240;UBERON:0004121,1.33e-15,171;UBERON:0000924,1.33e-15,171;UBERON:0006601,1.33e-15,171;UBERON:0000955,2.12e-15,68;UBERON:0006238,2.12e-15,68;UBERON:0003075,2.44e-15,82;UBERON:0007284,2.44e-15,82;UBERON:0003528,4.25e-15,34;UBERON:0002020,4.25e-15,34;UBERON:0010371,1.75e-14,104;UBERON:0001893,2.87e-14,34;UBERON:0002791,7.34e-14,32;UBERON:0001869,1.20e-13,32;UBERON:0011216,1.27e-13,223;UBERON:0000922,2.61e-13,592;UBERON:0002619,3.59e-13,22;UBERON:0000956,7.74e-12,25;UBERON:0000203,7.74e-12,25;UBERON:0001950,8.95e-12,20;UBERON:0002050,4.49e-11,564;UBERON:0003056,4.91e-11,61;UBERON:0005423,8.37e-11,581;UBERON:0000923,1.44e-10,560;UBERON:0010316,1.44e-10,560;UBERON:0005291,1.44e-10,560;UBERON:0006598,1.44e-10,560;UBERON:0010317,1.44e-10,560;UBERON:0002532,1.44e-10,560;UBERON:0010314,2.34e-10,132;UBERON:0000025,3.48e-09,192;UBERON:0000483,7.29e-08,306;UBERON:0000119,1.21e-07,309;UBERON:0002553,3.53e-07,61 | |||
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| ||
|short_description=p5@APP | |short_description=p5@APP | ||
}} | }} |
Latest revision as of 23:02, 17 September 2015
Short description: | p5@APP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_APP_5end |
Coexpression cluster: | C1073_olfactory_Prostate_Cardiac_medial_occipital_seminal_diencephalon |
Association with transcript: | -111bp_to_ENST00000415997_5end |
EntrezGene: | APP |
HGNC: | 620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.33e-08 | 253 |
lining cell | 7.11e-07 | 58 |
barrier cell | 7.11e-07 | 58 |