FFCP PHASE1:Hg19::chr17:39658661..39658672,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3860 | |EntrezGene=3860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6415 | |HGNC=6415 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-498bp_to_ENST00000475217_5end | |association_with_transcript=-498bp_to_ENST00000475217_5end | ||
|cluster_id=chr17:39658661..39658672,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_11_at_KRT13_5end | |description=CAGE_peak_11_at_KRT13_5end | ||
|id=chr17:39658661..39658672,- | |id=chr17:39658661..39658672,- | ||
|ontology_enrichment_celltype=CL:0002621!2.38e-12!3 | |ontology_enrichment_celltype=CL:0002621!2.38e-12!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.16e-26;1!UBERON:0008814;8.82e-14;2!UBERON:0010056;8.82e-14;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000161!5.44e-23!35;UBERON:0000166!1.55e-19!21;UBERON:0003127!3.16e-18!2;UBERON:0000165!1.78e-14!28;UBERON:0000930!1.78e-14!28;UBERON:0001042!2.49e-14!10;UBERON:0009145!2.49e-14!10;UBERON:0000974!5.86e-14!10;UBERON:0006562!4.78e-13!11;UBERON:0001723!5.19e-13!3;UBERON:0001033!5.19e-13!3;UBERON:0010056!5.19e-13!3;UBERON:0001004!9.46e-13!72;UBERON:0001949!2.38e-12!3;UBERON:0003126!9.09e-12!7;UBERON:0001005!9.09e-12!7;UBERON:0002372!2.84e-10!1;UBERON:0001961!2.84e-10!1;UBERON:0001744!2.84e-10!1;UBERON:0001735!2.84e-10!1;UBERON:0000989!3.71e-10!1;UBERON:0008811!3.71e-10!1;UBERON:0006258!3.71e-10!1;UBERON:0005876!3.71e-10!1;UBERON:0004874!3.71e-10!1;UBERON:0007029!4.44e-10!1;UBERON:0001007!7.36e-10!155;UBERON:0001555!7.36e-10!155;UBERON:0007026!7.36e-10!155;UBERON:0003343!2.06e-09!4;UBERON:0004785!2.06e-09!4;UBERON:0003102!3.44e-09!95;UBERON:0004119!7.81e-09!169;UBERON:0000925!7.81e-09!169;UBERON:0006595!7.81e-09!169;UBERON:0000072!1.40e-08!46;UBERON:0001444!3.90e-08!48;UBERON:0003729!1.06e-07!5;UBERON:0001557!1.28e-07!19;UBERON:0000065!2.40e-07!53;UBERON:0000344!5.26e-07!12;UBERON:0000002!7.47e-07!6;UBERON:0001560!7.47e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;5.50e-34;3!UBERON:0001033;5.50e-34;3!UBERON:0005795;4.06e-26;1!UBERON:0002372;1.11e-25;1!UBERON:0001961;1.11e-25;1!UBERON:0001744;1.11e-25;1!UBERON:0001042;1.11e-25;1!UBERON:0001735;1.11e-25;1!UBERON:0000002;2.48e-17;6!UBERON:0001560;2.48e-17;6!UBERON:0000341;8.82e-14;2!UBERON:0006562;1.46e-13;2!UBERON:0001043;1.01e-09;3!UBERON:0000165;1.22e-08;28!UBERON:0000995;9.79e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,6.51e-34,3;UBERON:0001033,6.51e-34,3;UBERON:0010056,6.51e-34,3;UBERON:0002372,9.79e-26,1;UBERON:0001961,9.79e-26,1;UBERON:0001744,9.79e-26,1;UBERON:0001735,9.79e-26,1;UBERON:0001042,6.92e-23,10;UBERON:0009145,6.92e-23,10;UBERON:0006562,7.00e-21,11;UBERON:0000002,2.58e-17,6;UBERON:0001560,2.58e-17,6;UBERON:0000341,7.30e-14,2;UBERON:0001557,2.07e-12,19;UBERON:0000166,8.20e-11,22;UBERON:0005795,9.07e-11,22;UBERON:0001043,1.01e-09,3;UBERON:0009143,1.01e-09,3;UBERON:0000165,2.33e-08,29;UBERON:0000930,2.33e-08,29;UBERON:0000161,7.52e-07,36;UBERON:0000153,8.00e-07,62;UBERON:0007811,8.00e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25481369850743,2.46240827212151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0935172259366,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90438158372256,0,0.0645889098360061,0,0,0,0,4.57205170583619,4.10679961302337,1.48174516632093,0.430333232356058,0.332660356546013,0,0,0,0,0,0,4.47585796147312,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25481369850743,2.46240827212151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0935172259366,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90438158372256,0,0.0645889098360061,0,0,0,0,4.57205170583619,4.10679961302337,1.48174516632093,0.430333232356058,0.332660356546013,0,0,0,0,0,0,4.47585796147312,0,0,0 | ||
|short_description=p11@KRT13 | |short_description=p11@KRT13 | ||
}} | }} |
Latest revision as of 05:14, 20 September 2015
Short description: | p11@KRT13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_KRT13_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -498bp_to_ENST00000475217_5end |
EntrezGene: | KRT13 |
HGNC: | 6415 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 6.51e-34 | 3 |
gustatory system | 6.51e-34 | 3 |
future tongue | 6.51e-34 | 3 |
tonsil | 9.79e-26 | 1 |
mucosa-associated lymphoid tissue | 9.79e-26 | 1 |
lymphoid tissue | 9.79e-26 | 1 |
tonsillar ring | 9.79e-26 | 1 |
chordate pharynx | 6.92e-23 | 10 |
pharyngeal region of foregut | 6.92e-23 | 10 |
pharynx | 7.00e-21 | 11 |
uterine cervix | 2.58e-17 | 6 |
neck of organ | 2.58e-17 | 6 |
throat | 7.30e-14 | 2 |
upper respiratory tract | 2.07e-12 | 19 |
oral opening | 8.20e-11 | 22 |
embryonic uterus | 9.07e-11 | 22 |
esophagus | 1.01e-09 | 3 |
esophageal region | 1.01e-09 | 3 |
mouth | 2.33e-08 | 29 |
stomodeum | 2.33e-08 | 29 |
orifice | 7.52e-07 | 36 |
anterior region of body | 8.00e-07 | 62 |
craniocervical region | 8.00e-07 | 62 |