FFCP PHASE1:Hg19::chr2:149633261..149633270,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=74bp_to_AB384491_5end | |association_with_transcript=74bp_to_AB384491_5end | ||
|cluster_id=chr2:149633261..149633270,+ | |||
|coexpression_cluster_id=C552 | |||
|description=CAGE_peak_1_at_AB384491_5end | |description=CAGE_peak_1_at_AB384491_5end | ||
|id=chr2:149633261..149633270,+ | |id=chr2:149633261..149633270,+ | ||
|ontology_enrichment_celltype=CL:0002319!3.20e-07!25 | |ontology_enrichment_celltype=CL:0002319!3.20e-07!25 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;1.26e-30;20!UBERON:0002619;4.85e-28;22!UBERON:0000956;6.59e-25;25!UBERON:0000203;6.59e-25;25!UBERON:0001871;1.36e-23;6!UBERON:0002771;3.44e-21;2!UBERON:0001893;5.36e-19;34!UBERON:0002791;5.42e-19;32!UBERON:0001869;5.42e-19;32!UBERON:0002114;1.31e-14;2!UBERON:0003528;2.27e-14;34!UBERON:0002020;2.27e-14;34!UBERON:0002780;2.22e-11;41!UBERON:0001890;2.22e-11;41!UBERON:0002108;2.63e-09;4!UBERON:0001872;3.22e-09;5!UBERON:0002021;3.22e-09;5!UBERON:0000922;3.36e-09;49!UBERON:0000073;1.05e-08;53!UBERON:0002616;1.05e-08;53!UBERON:0001017;1.95e-08;75!UBERON:0000200;5.73e-08;6!UBERON:0000955;1.56e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.22e-30,20;UBERON:0002619,4.68e-28,22;UBERON:0000956,6.39e-25,25;UBERON:0000203,6.39e-25,25;UBERON:0001871,1.44e-23,6;UBERON:0002771,3.11e-21,2;UBERON:0002791,8.18e-20,32;UBERON:0001869,8.18e-20,32;UBERON:0003528,9.96e-19,34;UBERON:0002020,9.96e-19,34;UBERON:0001893,9.96e-19,34;UBERON:0002780,9.75e-16,41;UBERON:0001890,9.75e-16,41;UBERON:0003080,9.75e-16,41;UBERON:0006240,9.75e-16,41;UBERON:0002114,1.40e-14,2;UBERON:0000073,2.11e-12,53;UBERON:0002616,2.11e-12,53;UBERON:0001049,8.70e-12,56;UBERON:0005068,8.70e-12,56;UBERON:0006241,8.70e-12,56;UBERON:0007135,8.70e-12,56;UBERON:0003056,6.84e-11,61;UBERON:0000955,1.01e-09,68;UBERON:0006238,1.01e-09,68;UBERON:0002108,2.74e-09,4;UBERON:0002021,2.97e-09,5;UBERON:0001872,3.22e-09,5;UBERON:0001017,2.69e-08,81;UBERON:0003075,2.69e-08,82;UBERON:0007284,2.69e-08,82;UBERON:0000200,5.54e-08,6;UBERON:0002346,6.09e-08,86;UBERON:0001016,1.53e-07,89 | |||
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| ||
|short_description=p1@AB384491 | |short_description=p1@AB384491 | ||
}} | }} |
Latest revision as of 01:09, 29 July 2015
Short description: | p1@AB384491 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB384491_5end |
Coexpression cluster: | C552_medial_temporal_occipital_parietal_duodenum_brain_spinal |
Association with transcript: | 74bp_to_AB384491_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 1.22e-30 | 20 |
regional part of cerebral cortex | 4.68e-28 | 22 |
cerebral cortex | 6.39e-25 | 25 |
pallium | 6.39e-25 | 25 |
temporal lobe | 1.44e-23 | 6 |
middle temporal gyrus | 3.11e-21 | 2 |
regional part of telencephalon | 8.18e-20 | 32 |
cerebral hemisphere | 8.18e-20 | 32 |
brain grey matter | 9.96e-19 | 34 |
gray matter | 9.96e-19 | 34 |
telencephalon | 9.96e-19 | 34 |
regional part of forebrain | 9.75e-16 | 41 |
forebrain | 9.75e-16 | 41 |
anterior neural tube | 9.75e-16 | 41 |
future forebrain | 9.75e-16 | 41 |
duodenum | 1.40e-14 | 2 |
regional part of nervous system | 2.11e-12 | 53 |
regional part of brain | 2.11e-12 | 53 |
neural tube | 8.70e-12 | 56 |
neural rod | 8.70e-12 | 56 |
future spinal cord | 8.70e-12 | 56 |
neural keel | 8.70e-12 | 56 |
pre-chordal neural plate | 6.84e-11 | 61 |
brain | 1.01e-09 | 68 |
future brain | 1.01e-09 | 68 |
small intestine | 2.74e-09 | 4 |
occipital lobe | 2.97e-09 | 5 |
parietal lobe | 3.22e-09 | 5 |
central nervous system | 2.69e-08 | 81 |
neural plate | 2.69e-08 | 82 |
presumptive neural plate | 2.69e-08 | 82 |
gyrus | 5.54e-08 | 6 |
neurectoderm | 6.09e-08 | 86 |
nervous system | 1.53e-07 | 89 |