FFCP PHASE1:Hg19::chr18:60190619..60190652,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54877 | |EntrezGene=54877 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22916 | |HGNC=22916 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C0B9,Q9BRD4 | |UniProt=Q9C0B9,Q9BRD4 | ||
|association_with_transcript=-5bp_to_ENST00000269499,NM_017742,uc002lio.2,uc002lip.3_5end | |association_with_transcript=-5bp_to_ENST00000269499,NM_017742,uc002lio.2,uc002lip.3_5end | ||
|cluster_id=chr18:60190619..60190652,+ | |||
|description=CAGE_peak_2_at_ZCCHC2_5end | |description=CAGE_peak_2_at_ZCCHC2_5end | ||
|id=chr18:60190619..60190652,+ | |id=chr18:60190619..60190652,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.01e-19!140;CL:0002031!2.80e-15!124;CL:0002087!6.92e-15!119;CL:0000037!1.18e-14!172;CL:0000566!1.18e-14!172;CL:0000988!3.65e-14!182;CL:0002032!1.66e-13!165;CL:0000837!1.66e-13!165;CL:0000542!3.46e-09!53;CL:0000051!3.46e-09!53;CL:0000766!3.95e-09!76;CL:0000838!6.89e-09!52;CL:0000839!5.94e-07!70;CL:0000557!7.09e-07!71;CL:0000791!8.81e-07!18;CL:0000789!8.81e-07!18;CL:0002420!8.81e-07!18;CL:0002419!8.81e-07!18;CL:0000790!8.81e-07!18 | |ontology_enrichment_celltype=CL:0000738!1.01e-19!140;CL:0002031!2.80e-15!124;CL:0002087!6.92e-15!119;CL:0000037!1.18e-14!172;CL:0000566!1.18e-14!172;CL:0000988!3.65e-14!182;CL:0002032!1.66e-13!165;CL:0000837!1.66e-13!165;CL:0000542!3.46e-09!53;CL:0000051!3.46e-09!53;CL:0000766!3.95e-09!76;CL:0000838!6.89e-09!52;CL:0000839!5.94e-07!70;CL:0000557!7.09e-07!71;CL:0000791!8.81e-07!18;CL:0000789!8.81e-07!18;CL:0002420!8.81e-07!18;CL:0002419!8.81e-07!18;CL:0000790!8.81e-07!18 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.47e-20,136;CL:0002031,1.83e-15,120;CL:0002087,4.97e-15,115;CL:0000037,8.49e-15,168;CL:0000988,1.01e-14,177;CL:0002032,1.71e-13,161;CL:0000837,1.71e-13,161;CL:0000542,2.03e-10,53;CL:0000051,2.03e-10,53;CL:0000838,4.52e-10,52;CL:0000766,1.40e-08,72;CL:0000791,2.77e-07,18;CL:0000789,2.77e-07,18;CL:0002420,2.77e-07,18;CL:0002419,2.77e-07,18;CL:0000790,2.77e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.65e-17!115;UBERON:0002390!2.40e-10!102;UBERON:0003061!2.40e-10!102;UBERON:0002193!3.70e-10!112;UBERON:0000178!2.23e-07!15;UBERON:0000179!2.23e-07!15;UBERON:0000463!2.23e-07!15;UBERON:0002405!5.15e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!1.65e-17!115;UBERON:0002390!2.40e-10!102;UBERON:0003061!2.40e-10!102;UBERON:0002193!3.70e-10!112;UBERON:0000178!2.23e-07!15;UBERON:0000179!2.23e-07!15;UBERON:0000463!2.23e-07!15;UBERON:0002405!5.15e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.94e-08;15!UBERON:0000179;2.94e-08;15!UBERON:0000463;2.94e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.01e-17,114;UBERON:0002193,6.48e-11,108;UBERON:0002390,8.29e-11,98;UBERON:0003061,8.29e-11,98;UBERON:0000178,2.40e-08,15;UBERON:0000179,2.40e-08,15;UBERON:0000463,2.40e-08,15 | |||
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| ||
|short_description=p2@ZCCHC2 | |short_description=p2@ZCCHC2 | ||
}} | }} |
Latest revision as of 02:45, 20 September 2015
Short description: | p2@ZCCHC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZCCHC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000269499, NM_017742, uc002lio.2, uc002lip.3_5end |
EntrezGene: | ZCCHC2 |
HGNC: | 22916 |
UniProt: | Q9C0B9Q9BRD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.47e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 1.83e-15 | 120 |
nongranular leukocyte | 4.97e-15 | 115 |
hematopoietic stem cell | 8.49e-15 | 168 |
hematopoietic cell | 1.01e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.71e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.71e-13 | 161 |
lymphocyte | 2.03e-10 | 53 |
common lymphoid progenitor | 2.03e-10 | 53 |
lymphoid lineage restricted progenitor cell | 4.52e-10 | 52 |
myeloid leukocyte | 1.40e-08 | 72 |
mature alpha-beta T cell | 2.77e-07 | 18 |
alpha-beta T cell | 2.77e-07 | 18 |
immature T cell | 2.77e-07 | 18 |
mature T cell | 2.77e-07 | 18 |
immature alpha-beta T cell | 2.77e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.01e-17 | 114 |
hemolymphoid system | 6.48e-11 | 108 |
hematopoietic system | 8.29e-11 | 98 |
blood island | 8.29e-11 | 98 |
blood | 2.40e-08 | 15 |
haemolymphatic fluid | 2.40e-08 | 15 |
organism substance | 2.40e-08 | 15 |