FFCP PHASE1:Hg19::chr2:96959867..96959871,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:96959867..96959871,- | |||
|coexpression_cluster_id=C306 | |||
|description=CAGE_peak_at_chr2:96959867..96959871,- | |description=CAGE_peak_at_chr2:96959867..96959871,- | ||
|id=chr2:96959867..96959871,- | |id=chr2:96959867..96959871,- | ||
|ontology_enrichment_celltype=CL:0000988!2.58e-11!182;CL:0000037!3.84e-11!172;CL:0000566!3.84e-11!172;CL:0000738!1.64e-10!140;CL:0000542!2.21e-10!53;CL:0000051!2.21e-10!53;CL:0000838!2.99e-10!52;CL:0002087!4.64e-10!119;CL:0002032!2.27e-09!165;CL:0000837!2.27e-09!165;CL:0002031!1.23e-07!124 | |ontology_enrichment_celltype=CL:0000988!2.58e-11!182;CL:0000037!3.84e-11!172;CL:0000566!3.84e-11!172;CL:0000738!1.64e-10!140;CL:0000542!2.21e-10!53;CL:0000051!2.21e-10!53;CL:0000838!2.99e-10!52;CL:0002087!4.64e-10!119;CL:0002032!2.27e-09!165;CL:0000837!2.27e-09!165;CL:0002031!1.23e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000623;8.85e-18;3!CL:0000226;5.34e-17;3!CL:0000842;5.34e-17;3!CL:0000791;4.34e-15;18!CL:0000789;4.34e-15;18!CL:0002419;4.34e-15;18!CL:0000084;1.33e-10;25!CL:0000624;1.58e-09;6!CL:0000542;1.71e-09;53!CL:0000625;1.37e-08;11!CL:0000094;6.62e-07;8!CL:0000511;8.72e-07;1!CL:0002625;8.72e-07;1!CL:0000216;8.72e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,5.17e-18,3;CL:0000825,5.17e-18,3;CL:0000226,4.18e-17,3;CL:0000842,4.18e-17,3;CL:0000838,2.39e-16,52;CL:0000542,5.47e-16,53;CL:0000051,5.47e-16,53;CL:0000791,3.44e-15,18;CL:0000789,3.44e-15,18;CL:0002420,3.44e-15,18;CL:0002419,3.44e-15,18;CL:0000790,3.44e-15,18;CL:0000738,2.18e-12,136;CL:0000084,1.13e-10,25;CL:0000827,1.13e-10,25;CL:0002087,1.21e-10,115;CL:0000037,2.29e-10,168;CL:0000988,1.29e-09,177;CL:0000624,1.56e-09,6;CL:0000625,1.12e-08,11;CL:0002032,1.27e-07,161;CL:0000837,1.27e-07,161;CL:0000511,6.38e-07,1;CL:0002625,6.38e-07,1;CL:0000216,6.38e-07,1;CL:0000094,6.57e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;4.34e-15;18!CL:0000051;1.71e-09;53!UBERON:0005425;8.72e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;6.27e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.84e-09,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;8.72e-07;1!UBERON:0000941;8.72e-07;1!UBERON:0001343;8.72e-07;1!UBERON:0001785;8.72e-07;1!UBERON:0002464;8.72e-07;1!UBERON:0004904;8.72e-07;1!UBERON:0001021;8.72e-07;1!UBERON:0004910;8.72e-07;1!UBERON:0004813;8.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.38e-07,1;UBERON:0001343,6.38e-07,1;UBERON:0004910,6.38e-07,1;UBERON:0005154,6.38e-07,1;UBERON:0005295,6.38e-07,1;UBERON:0004813,6.38e-07,1;UBERON:0005297,6.38e-07,1;UBERON:0005294,6.38e-07,1;UBERON:0010141,6.38e-07,1;UBERON:0005891,6.38e-07,1;UBERON:0000941,6.76e-07,1;UBERON:0001785,6.76e-07,1;UBERON:0002464,6.76e-07,1;UBERON:0004904,6.76e-07,1;UBERON:0001021,6.76e-07,1;UBERON:0003902,6.76e-07,1;UBERON:0005425,6.76e-07,1 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.305653622991805,0.410502947249729,0.393553906568396,0.786728553697808,2.30297638858328,0.154816123316076,0,0,0,0.46480320348181,0.426507697462265,0.293600439334847,1.10799081706375,0.802177789880567,0.868043482863407,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0.232429036905685,0.411167888021826,0.619412741790207,0,0,0.236482229888585,0,0,0,0.564727018627814,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0.398927315243264,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0.22465726229299,0.150176892841506,0.32145117339416,0.285012743741249,0.19891667719909,0.182664153764634,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0,0,3.98449078376614,4.11066032559657,6.11637165000366,0,0,0,5.70458333330116,5.89516144123747,4.11202997999018,0,0.32592226663359,0.946895611469467,1.94826728407911,0.445641827540694,0.589211814949674,0.886135578334485,1.35401931882508,0.512365278902701,0.390178042679635,0,0,0.289803085735052,1.33457906845854,0.535081656179426,3.1360657141493,0,0.766440987203842,0.34362744548263,0.506039384039006,0.637130828648193,1.95325036156926,0,0,0.127986611154418,0,0,0.821127996921047,2.82249440514625,5.08136371988664,4.34473211648397,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0.649094787309367,0,0.26591592103773,0.715471872916026,0,0.74291500265913,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0.735326160691737,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0.860509862246441,0.354668382198357,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0.717558542755448,0,0.211931901159562,0.900273288253207,0.206105058476878,0.515281080091258,0,0.337552664482532,0.0974370051611986,0.504867548488229,0,0,1.06502877754984,0,0.169560592310488,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0,0.288239906833923,0,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,2.56139988262505,1.94064817373566,4.87703537863044,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,1.6541442089831,1.2942852049117,1.28073069364133,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0.229628896329213,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0.27470839445503,0.165018999841176,0,0,1.6068392984416,0,0,0.15350367472613,0.275673144969061,0.322260734604821,0,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0.94443704049192,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.714695326373367,1.23408681925858,0.648473311192717,0,0,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0.142283686696828,0,0.399158742865633,0.191505370132367,0,0.324621940274555,0,1.14117339516596,0.47003968731907,0,0,0,0.80719882876419,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0.270455678475983,0,0,0.37428108081644,0,0.36408156524854,0.66866030566487,0,0,0,0,0,0.562677665642051,0.111308705022906,0.16480387422676,0,0.19924798825107,0,0,0.102268682502155,0.492339221844278,0,0,0.895105873378046,0.511572370226872,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0,0.349839999984783,0,0.227586896570999,0.254253650292766,0,0,0.291604613383254,0.347249989866585,0,0.120596438625408,0,0.331737779793674,0.591095237907095,0.438770794307945,0.10893846351899,0,0.307801034015188,0.113942055847001,0.46112780877612,0.179515288819544,0.54323685961004,0.31900115973192,0,0,0,0.784901281975124,0.332423363800313,0,0.392125068635479,0.503464760927528,0,0.158936578980379,0.210998064528027,0,0.141353071433941,0.649165919226273,0.995261931078505,0.0884575645033392,0.611030144933625,0.593042257361244,0.370691816839509,0.522109747527277,0.134802265961354,0,0,0.91227394607833,0,0.242780379534093,0,0,0.30607276163049,0.379119477770928,0,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0.0967563312890851,0.43853590251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| ||
|short_description=p@chr2:96959867..96959871,- | |short_description=p@chr2:96959867..96959871,- | ||
}} | }} |
Latest revision as of 13:19, 29 July 2015
Short description: | p@chr2:96959867..96959871, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:96959867..96959871, - |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 5.17e-18 | 3 |
pro-NK cell | 5.17e-18 | 3 |
single nucleate cell | 4.18e-17 | 3 |
mononuclear cell | 4.18e-17 | 3 |
lymphoid lineage restricted progenitor cell | 2.39e-16 | 52 |
lymphocyte | 5.47e-16 | 53 |
common lymphoid progenitor | 5.47e-16 | 53 |
mature alpha-beta T cell | 3.44e-15 | 18 |
alpha-beta T cell | 3.44e-15 | 18 |
immature T cell | 3.44e-15 | 18 |
mature T cell | 3.44e-15 | 18 |
immature alpha-beta T cell | 3.44e-15 | 18 |
leukocyte | 2.18e-12 | 136 |
T cell | 1.13e-10 | 25 |
pro-T cell | 1.13e-10 | 25 |
nongranular leukocyte | 1.21e-10 | 115 |
hematopoietic stem cell | 2.29e-10 | 168 |
hematopoietic cell | 1.29e-09 | 177 |
CD4-positive, alpha-beta T cell | 1.56e-09 | 6 |
CD8-positive, alpha-beta T cell | 1.12e-08 | 11 |
hematopoietic oligopotent progenitor cell | 1.27e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.27e-07 | 161 |
androgen binding protein secreting cell | 6.38e-07 | 1 |
seminiferous tubule epithelial cell | 6.38e-07 | 1 |
Sertoli cell | 6.38e-07 | 1 |
granulocyte | 6.57e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 6.38e-07 | 1 |
seminiferous tubule of testis | 6.38e-07 | 1 |
epithelium of male gonad | 6.38e-07 | 1 |
epithelial cord | 6.38e-07 | 1 |
sex cord | 6.38e-07 | 1 |
seminiferous tubule epithelium | 6.38e-07 | 1 |
testis sex cord | 6.38e-07 | 1 |
genital ridge | 6.38e-07 | 1 |
primitive sex cord of indifferent gonad | 6.38e-07 | 1 |
coelomic epithelium | 6.38e-07 | 1 |
cranial nerve II | 6.76e-07 | 1 |
cranial nerve | 6.76e-07 | 1 |
nerve trunk | 6.76e-07 | 1 |
nerve connecting eye with brain | 6.76e-07 | 1 |
nerve | 6.76e-07 | 1 |
retinal neural layer | 6.76e-07 | 1 |
presumptive neural retina | 6.76e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.84e-09 | 10 |