FFCP PHASE1:Hg19::chr3:111718173..111718193,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29114 | |EntrezGene=29114 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29868 | |HGNC=29868 | ||
|TSSclassifier=strong | |||
|UniProt=C9JCX3 | |UniProt=C9JCX3 | ||
|association_with_transcript=-1bp_to_ENST00000494932_5end | |association_with_transcript=-1bp_to_ENST00000494932_5end | ||
|cluster_id=chr3:111718173..111718193,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_TAGLN3_5end | |description=CAGE_peak_1_at_TAGLN3_5end | ||
|id=chr3:111718173..111718193,+ | |id=chr3:111718173..111718193,+ | ||
|ontology_enrichment_celltype=CL:0000221!3.73e-08!71;CL:0000393!6.06e-08!60;CL:0000211!6.06e-08!60;CL:0000183!4.14e-07!59;CL:1000449!4.94e-07!16;CL:1000507!9.07e-07!12;CL:1000494!9.07e-07!12 | |ontology_enrichment_celltype=CL:0000221!3.73e-08!71;CL:0000393!6.06e-08!60;CL:0000211!6.06e-08!60;CL:0000183!4.14e-07!59;CL:1000449!4.94e-07!16;CL:1000507!9.07e-07!12;CL:1000494!9.07e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.70e-08;10!CL:1000494;1.70e-08;10!CL:1000449;4.40e-08;15!CL:0002159;3.68e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.80e-09,72;CL:1000507,1.61e-08,10;CL:1000494,1.61e-08,10;CL:1000449,4.25e-08,15;CL:0002159,3.67e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.64e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;5.79e-28;53!UBERON:0002616;5.79e-28;53!UBERON:0001893;1.07e-27;34!UBERON:0001869;1.16e-27;32!UBERON:0003528;1.64e-27;34!UBERON:0002020;1.64e-27;34!UBERON:0002780;3.58e-27;41!UBERON:0001890;3.58e-27;41!UBERON:0002791;4.55e-27;32!UBERON:0000956;6.00e-24;25!UBERON:0000203;6.00e-24;25!UBERON:0002619;1.66e-22;22!UBERON:0001950;1.23e-20;20!UBERON:0000955;2.91e-18;68!UBERON:0001017;7.01e-18;75!UBERON:0001016;6.49e-16;83!UBERON:0004732;1.14e-12;13!UBERON:0004733;4.07e-12;12!UBERON:0002028;4.07e-12;12!UBERON:0000125;2.31e-09;9!UBERON:0002308;2.31e-09;9!UBERON:0002420;2.38e-09;9!UBERON:0007245;2.38e-09;9!UBERON:0010009;2.38e-09;9!UBERON:0010011;2.38e-09;9!UBERON:0000454;2.38e-09;9!UBERON:0002680;2.50e-09;9!UBERON:0001895;2.50e-09;9!UBERON:0004211;1.70e-08;10!UBERON:0009773;1.70e-08;10!UBERON:0001231;1.70e-08;10!UBERON:0004810;1.70e-08;10!UBERON:0006555;4.40e-08;15!UBERON:0004819;4.40e-08;15!UBERON:0001285;4.40e-08;15!UBERON:0007684;4.40e-08;15!UBERON:0000200;4.85e-08;6!UBERON:0001894;1.20e-07;7!UBERON:0010314;1.44e-07;132!UBERON:0002298;1.90e-07;6!UBERON:0009663;1.97e-07;7!UBERON:0002021;9.53e-07;5!UBERON:0001872;9.85e-07;5 | |||
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| ||
|short_description=p1@TAGLN3 | |short_description=p1@TAGLN3 | ||
}} | }} |
Latest revision as of 13:12, 19 September 2015
Short description: | p1@TAGLN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TAGLN3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -1bp_to_ENST00000494932_5end |
EntrezGene: | TAGLN3 |
HGNC: | 29868 |
UniProt: | C9JCX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.80e-09 | 72 |
kidney tubule cell | 1.61e-08 | 10 |
nephron tubule epithelial cell | 1.61e-08 | 10 |
epithelial cell of nephron | 4.25e-08 | 15 |
general ecto-epithelial cell | 3.67e-07 | 14 |