FFCP PHASE1:Hg19::chr12:13065626..13065659,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:13065626..13065659,+
|short_description=p@chr12:13065626..13065659,+
|description=CAGE_peak_at_chr12:13065626..13065659,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:13065626..13065659,+ | |||
|coexpression_cluster_id=C814 | |||
|description=CAGE_peak_at_chr12:13065626..13065659,+ | |||
|id=chr12:13065626..13065659,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.85e-31!254;CL:0000077!2.41e-12!19;CL:0002076!1.44e-08!43;CL:0000076!5.32e-08!62 | |||
|ontology_enrichment_celltype_v019=CL:0000077;4.45e-16;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.43e-24,253;CL:0000077,2.55e-16,19;CL:0000076,2.33e-09,63 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.07e-11;29 | |||
|ontology_enrichment_disease=DOID:305!4.93e-26!106;DOID:0050687!1.18e-20!143;DOID:299!6.14e-12!25;DOID:14566!6.74e-12!239;DOID:162!1.69e-10!235;DOID:1749!3.45e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:299;2.45e-10;25!DOID:1749;1.56e-08;14!DOID:305;2.17e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.95e-25,106;DOID:0050687,2.28e-20,143;DOID:14566,7.74e-16,239;DOID:162,2.29e-14,235;DOID:299,1.65e-10,25;DOID:1749,1.57e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.27e-12!169;UBERON:0000925!3.27e-12!169;UBERON:0006595!3.27e-12!169;UBERON:0001007!6.44e-11!155;UBERON:0001555!6.44e-11!155;UBERON:0007026!6.44e-11!155;UBERON:0004921!1.80e-10!129;UBERON:0004185!1.80e-10!129;UBERON:0003104!1.61e-09!238;UBERON:0009142!1.61e-09!238;UBERON:0008947!3.67e-09!38;UBERON:0003258!3.67e-09!38;UBERON:0006554!4.90e-09!44;UBERON:0003064!5.69e-09!37;UBERON:0000065!1.33e-08!53;UBERON:0001008!1.37e-08!45;UBERON:0000077!5.92e-08!130;UBERON:0001737!1.11e-07!9;UBERON:0004122!1.43e-07!15;UBERON:0005153!1.50e-07!37;UBERON:0005911!1.92e-07!82;UBERON:0002367!2.03e-07!11;UBERON:0010147!2.03e-07!11;UBERON:0009846!2.03e-07!11;UBERON:0003353!2.03e-07!11;UBERON:0004902!2.03e-07!11;UBERON:0003820!2.03e-07!11;UBERON:0009847!2.03e-07!11;UBERON:0002100!7.77e-07!216;UBERON:0003101!8.21e-07!22;UBERON:0000079!8.21e-07!22;UBERON:0000162!8.32e-07!14;UBERON:0001353!8.32e-07!14;UBERON:0000163!8.32e-07!14;UBERON:0006866!8.32e-07!14;UBERON:0000164!8.32e-07!14;UBERON:0000931!8.32e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.28e-10;9!UBERON:0001557;2.28e-10;9!UBERON:0002367;1.27e-09;11!UBERON:0010147;1.27e-09;11!UBERON:0003937;1.20e-08;12!UBERON:0005399;1.20e-08;12!UBERON:0000065;1.49e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.40e-10,9;UBERON:0002367,1.20e-09,11;UBERON:0010147,1.20e-09,11;UBERON:0009846,1.20e-09,11;UBERON:0003353,1.20e-09,11;UBERON:0004902,1.20e-09,11;UBERON:0003820,1.20e-09,11;UBERON:0009847,1.20e-09,11;UBERON:0008947,1.82e-09,38;UBERON:0003258,1.82e-09,38;UBERON:0003937,1.14e-08,12;UBERON:0005399,1.14e-08,12;UBERON:0005153,1.63e-08,37;UBERON:0004921,2.20e-08,118;UBERON:0004122,2.42e-08,15;UBERON:0000065,2.61e-08,54;UBERON:0004119,1.69e-07,160;UBERON:0000925,1.69e-07,160;UBERON:0006595,1.69e-07,160;UBERON:0003064,2.49e-07,28;UBERON:0001007,3.47e-07,145;UBERON:0001555,3.47e-07,145;UBERON:0007026,3.47e-07,145;UBERON:0000162,3.85e-07,14;UBERON:0001353,3.85e-07,14;UBERON:0000163,3.85e-07,14;UBERON:0006866,3.85e-07,14;UBERON:0000164,3.85e-07,14;UBERON:0000931,3.85e-07,14 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,8.10921990454979,3.48900583986214,0.218441372130172,0.791300934685361,1.23766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0,0,0.580418477257168,0,0,0,1.0429658368404,0.217188844705117,0,0.736555271975129,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0.722878304769133,0,2.89693037921647,0,0,0.378139268656271,1.55210578223795,0.702678285545008,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0.825354125820202,0.208994966536811,0.258416759169329,0,0,0,0,0,0,1.62028389576352,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.397227542439656,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0,0,0.151357427644931,1.15235184896,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0.247266929278557,0.910161361938026,1.43723628363248,0,0,0,0,0,0.45071417671979,1.13432183160021,0.179389635688862,0.427114777637135,0,0.300091096084402,0.103052529238439,0.515281080091258,0.744467425326359,0,0,0,0,0,0,0,0.169560592310488,0.57978255948989,0,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0,0,0,0,2.36613600079688,4.21461725195254,3.37415441836875,4.41175890929576,3.7039505495709,4.50814176311084,2.83145747136345,1.96221465125346,0.769494313892781,0,0,0,0,0,0,0,0,2.09080345523293,2.40194934417936,0,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,8.6598805215164,0,0.587043471179108,0,0,0,3.95102198979638,1.71697232418975,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.205654985406647,0.600686115687835,0.571652865261156,0,0.43596006883328,1.0267360014933,0.904902010304444,0,0,1.06375246633948,1.04007436911366,0.257207374262142,0,0.266422179016099,0.428933980974443,0.542621605391443,0,0,0.355391948742546,0.791951872933429,0.904318131178758,0.871533458600294,5.59848750619519,0,0,0,0,0,0,0.289562613335158,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0.500170521059677,0,0.415941723061614,1.24900292158013,0.630809660135739,0.234282829985426,0,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0.232420756919918,1.32945394550784,4.41114234667227,2.5782676902051,4.93702127107809,1.82091168006717,3.01586154406675,3.60959690325929,3.92778219232515,0,0,0.949964660035881,0,0.170093705276516,0.647747748306418,0,1.35473218771926,0.501689773854853,7.90116446439619,8.31076008928724,0.447749509444357,0,0,1.28225062558195,4.92021968549559,0.325378394664303,0.9273691048295,0,0,0,0,6.42735719376638,0,0,0,0.137836572484531,0,0,0,0,2.14870389969272,0.384380134730212,1.27612712494584,0.708104465988849,0,0,0.6970372701606,0.308033580176089,0.532306030317022,0,0,0,1.116475108079,1.2655176988749,1.33441135746677,0,0,0,0,0.539617372749944,0.54907405947211,0.706874414074119,0.202182481573316,1.58510321173008,0,0.975267478179181,1.70599442741899,0,0.545999645631943,2.82810863907426,0,1.10273068709225,3.3171948762061,0,0,0.655894752046633,0.202910376962704,0,0,0.143411352204052,0.687743287091848,0.35667105148125,0,2.32218398827431,0,0,0,0.0962221127255121,0,1.08890984861323,1.12972560932135,1.72202149068492,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0.146508179271894,0,0,0.284136146806413,3.34242278632766,1.48482340416319,1.84296421259539,0,0.140669416410513,0,0,0.211125408127993,1.39473591775749,0,0,1.43176155503017,0,0.311039587661807,3.86433909933505,2.32727527078292,0,0.295930216910801,0,1.11136990144637,0,0,0,1.82299432759663,0.174919999992391,0,1.70690172428249,1.27126825146383,0.709163045303809,0.344743373241465,0,0,0,0,0,0,0,0,0.32681539055697,1.25481369850743,0.153900517007594,0.569710279235006,0,0,1.4124158349861,3.50901275705111,1.19076871422421,0.533034776018635,0,0,0,0,0,0,0,0,1.89898258075224,3.26465616318295,0.282706142867882,0,0,0.353830258013357,4.888241159469,0,0,0,0,0,0,0,1.56531695145672,3.64170569301139,0,0,0.30607276163049,0,0.300646838828985,0.414752765588989,0.664653872707185,2.97892760287949,0,2.38944859545918,0.853828638089378,0.554698692052555,2.2562765983567,0.587954384486266,1.30588809870604,0,0,2.80593360738347,0.803982487948041,1.97077096927702,0,0,0.225980740780532,1.09633539717401,0,0,8.60426084033133,0.721429382263803,0,0.39961921916426,4.03453168031497,0,0,1.00838358591705,0,0.471388069233591,0.407712618220842,0.104602846312333,0,0,0,0,0,0.859530882839914,0,0,0.229160424011684,0,1.99679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.0788057072991982,0.0524545881349981,0.844802692155252,1.79287339332845,2.87872795979168,0.714695326373367,0,0,3.25799761052228,9.50643640321395,1.9595241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| ||
|short_description=p@chr12:13065626..13065659,+ | |||
}} | }} |
Latest revision as of 06:44, 24 July 2015
Short description: | p@chr12:13065626..13065659, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:13065626..13065659, + |
Coexpression cluster: | C814_Alveolar_mesothelioma_bile_Renal_papillotubular_papillary_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.43e-24 | 253 |
mesothelial cell | 2.55e-16 | 19 |
squamous epithelial cell | 2.33e-09 | 63 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.40e-10 | 9 |
prostate gland | 1.20e-09 | 11 |
male accessory sex gland | 1.20e-09 | 11 |
embryonic cloacal epithelium | 1.20e-09 | 11 |
epithelium of hindgut | 1.20e-09 | 11 |
urogenital sinus epithelium | 1.20e-09 | 11 |
prostate bud | 1.20e-09 | 11 |
prostate field | 1.20e-09 | 11 |
respiratory primordium | 1.82e-09 | 38 |
endoderm of foregut | 1.82e-09 | 38 |
sex gland | 1.14e-08 | 12 |
male reproductive gland | 1.14e-08 | 12 |
epithelial bud | 1.63e-08 | 37 |
subdivision of digestive tract | 2.20e-08 | 118 |
genitourinary system | 2.42e-08 | 15 |
respiratory tract | 2.61e-08 | 54 |
endoderm-derived structure | 1.69e-07 | 160 |
endoderm | 1.69e-07 | 160 |
presumptive endoderm | 1.69e-07 | 160 |
intermediate mesoderm | 2.49e-07 | 28 |
digestive system | 3.47e-07 | 145 |
digestive tract | 3.47e-07 | 145 |
primitive gut | 3.47e-07 | 145 |
cloaca | 3.85e-07 | 14 |
anal region | 3.85e-07 | 14 |
embryonic cloaca | 3.85e-07 | 14 |
terminal part of digestive tract | 3.85e-07 | 14 |
primitive urogenital sinus | 3.85e-07 | 14 |
proctodeum | 3.85e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.95e-25 | 106 |
cell type cancer | 2.28e-20 | 143 |
disease of cellular proliferation | 7.74e-16 | 239 |
cancer | 2.29e-14 | 235 |
adenocarcinoma | 1.65e-10 | 25 |
squamous cell carcinoma | 1.57e-08 | 14 |