FFCP PHASE1:Hg19::chr3:129407511..129407529,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23023 | |EntrezGene=23023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29116 | |HGNC=29116 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_uc003emy.3_5end | |association_with_transcript=-11bp_to_uc003emy.3_5end | ||
|cluster_id=chr3:129407511..129407529,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_9_at_TMCC1_5end | |description=CAGE_peak_9_at_TMCC1_5end | ||
|id=chr3:129407511..129407529,- | |id=chr3:129407511..129407529,- | ||
|ontology_enrichment_celltype=CL:0002322!2.29e-07!5;CL:0000128!4.46e-07!7;CL:0000126!4.46e-07!7;CL:0000127!4.46e-07!7;CL:0002453!4.46e-07!7 | |ontology_enrichment_celltype=CL:0002322!2.29e-07!5;CL:0000128!4.46e-07!7;CL:0000126!4.46e-07!7;CL:0000127!4.46e-07!7;CL:0002453!4.46e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000540;6.95e-10;6!CL:0000404;6.95e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.63e-11,8;CL:0000540,6.66e-10,6;CL:0000031,6.66e-10,6;CL:0000404,6.66e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.76e-14;82!UBERON:0006215;4.52e-13;3!CL:0000031;6.95e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;7.22e-43;53!UBERON:0002616;7.22e-43;53!UBERON:0002780;6.60e-39;41!UBERON:0001890;6.60e-39;41!UBERON:0001893;1.25e-31;34!UBERON:0003528;1.71e-30;34!UBERON:0002020;1.71e-30;34!UBERON:0002791;7.16e-29;32!UBERON:0001869;5.22e-28;32!UBERON:0000955;7.36e-28;68!UBERON:0001017;2.99e-27;75!UBERON:0002619;5.04e-25;22!UBERON:0001016;2.03e-23;83!UBERON:0001950;2.22e-23;20!UBERON:0000956;8.64e-22;25!UBERON:0000203;8.64e-22;25!UBERON:0000125;7.15e-20;9!UBERON:0002308;7.15e-20;9!UBERON:0001894;9.09e-20;7!UBERON:0004733;1.05e-19;12!UBERON:0002028;1.05e-19;12!UBERON:0004732;4.42e-18;13!UBERON:0007023;9.60e-16;114!UBERON:0002298;9.69e-16;6!UBERON:0003296;9.74e-16;4!UBERON:0010133;9.74e-16;4!UBERON:0000200;1.30e-15;6!UBERON:0002680;2.41e-15;9!UBERON:0001895;2.41e-15;9!UBERON:0002420;9.77e-15;9!UBERON:0007245;9.77e-15;9!UBERON:0010009;9.77e-15;9!UBERON:0010011;9.77e-15;9!UBERON:0000454;9.77e-15;9!UBERON:0009663;2.42e-13;7!UBERON:0000988;4.80e-12;3!UBERON:0011216;1.49e-10;132!UBERON:0002784;1.97e-09;4!UBERON:0001871;6.66e-09;6!UBERON:0000007;7.96e-09;2!UBERON:0002148;8.94e-09;2!UBERON:0006331;8.94e-09;2!UBERON:0009662;8.94e-09;2!UBERON:0002771;1.29e-08;2!UBERON:0001905;1.29e-08;2!UBERON:0001875;1.29e-08;2!UBERON:0002757;1.29e-08;2!UBERON:0010134;1.29e-08;2!UBERON:0005408;1.29e-08;2!UBERON:0006514;1.29e-08;2!UBERON:0001899;1.29e-08;2!UBERON:0000349;1.58e-07;5!UBERON:0001872;2.15e-07;5 | |||
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|short_description=p9@TMCC1 | |short_description=p9@TMCC1 | ||
}} | }} |
Latest revision as of 18:08, 24 September 2015
Short description: | p9@TMCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TMCC1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -11bp_to_uc003emy.3_5end |
EntrezGene: | TMCC1 |
HGNC: | 29116 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.63e-11 | 8 |
neuron | 6.66e-10 | 6 |
neuroblast | 6.66e-10 | 6 |
electrically signaling cell | 6.66e-10 | 6 |