FFCP PHASE1:Hg19::chr12:19592602..19592648,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:19592602..19592648,+
|short_description=p1@AEBP2
|description=CAGE_peak_1_at_AEBP2_5end
|association_with_transcript=0bp_to_ENST00000266508,ENST0000039886...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=121536 | |EntrezGene=121536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24051 | |HGNC=24051 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZN18,B3KXA1 | |UniProt=Q6ZN18,B3KXA1 | ||
|association_with_transcript=0bp_to_ENST00000266508,ENST00000398864,ENST00000435841,NM_001114176,NM_153207,uc001ree.2,uc001ref.2_5end | |||
|cluster_id=chr12:19592602..19592648,+ | |||
|description=CAGE_peak_1_at_AEBP2_5end | |||
|id=chr12:19592602..19592648,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.06e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.60e-32!115;UBERON:0001049!3.25e-15!57;UBERON:0005068!3.25e-15!57;UBERON:0006241!3.25e-15!57;UBERON:0007135!3.25e-15!57;UBERON:0003080!4.39e-13!42;UBERON:0002780!8.71e-13!41;UBERON:0001890!8.71e-13!41;UBERON:0006240!8.71e-13!41;UBERON:0000073!5.93e-12!94;UBERON:0001016!5.93e-12!94;UBERON:0000955!6.49e-12!69;UBERON:0006238!6.49e-12!69;UBERON:0005743!6.75e-12!86;UBERON:0002346!1.35e-11!90;UBERON:0001017!1.40e-11!82;UBERON:0002616!1.72e-11!59;UBERON:0003075!1.30e-10!86;UBERON:0007284!1.30e-10!86;UBERON:0002020!5.23e-10!34;UBERON:0003528!5.23e-10!34;UBERON:0001893!8.89e-10!34;UBERON:0002791!1.54e-09!33;UBERON:0001869!4.87e-09!32;UBERON:0000153!3.33e-08!129;UBERON:0007811!3.33e-08!129;UBERON:0003056!5.23e-08!61;UBERON:0002619!2.31e-07!22;UBERON:0000033!3.62e-07!123;UBERON:0000956!9.91e-07!25;UBERON:0000203!9.91e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.69e-09;41!UBERON:0001890;1.69e-09;41!UBERON:0007023;1.84e-09;114!UBERON:0000922;2.75e-09;49!UBERON:0000073;2.08e-08;53!UBERON:0002616;2.08e-08;53!UBERON:0003528;2.36e-08;34!UBERON:0002020;2.36e-08;34!UBERON:0002791;2.85e-08;32!UBERON:0001893;3.04e-08;34!UBERON:0001869;4.77e-08;32!UBERON:0002619;2.73e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.51e-32,114;UBERON:0001049,6.51e-15,56;UBERON:0005068,6.51e-15,56;UBERON:0006241,6.51e-15,56;UBERON:0007135,6.51e-15,56;UBERON:0000073,1.02e-13,53;UBERON:0002616,1.02e-13,53;UBERON:0002780,8.71e-13,41;UBERON:0001890,8.71e-13,41;UBERON:0003080,8.71e-13,41;UBERON:0006240,8.71e-13,41;UBERON:0002346,3.58e-12,86;UBERON:0000955,1.23e-11,68;UBERON:0006238,1.23e-11,68;UBERON:0001016,2.32e-11,89;UBERON:0001017,2.59e-11,81;UBERON:0003075,3.64e-11,82;UBERON:0007284,3.64e-11,82;UBERON:0003528,5.23e-10,34;UBERON:0002020,5.23e-10,34;UBERON:0001893,8.89e-10,34;UBERON:0002791,3.68e-09,32;UBERON:0001869,4.87e-09,32;UBERON:0011216,3.93e-08,223;UBERON:0003056,3.95e-08,61;UBERON:0002619,2.31e-07,22;UBERON:0004121,7.42e-07,171;UBERON:0000924,7.42e-07,171;UBERON:0006601,7.42e-07,171;UBERON:0000956,9.91e-07,25;UBERON:0000203,9.91e-07,25 | |||
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| ||
|short_description=p1@AEBP2 | |||
}} | }} |
Latest revision as of 18:07, 17 September 2015
Short description: | p1@AEBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AEBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000266508, ENST00000398864, ENST00000435841, NM_001114176, NM_153207, uc001ree.2, uc001ref.2_5end |
EntrezGene: | AEBP2 |
HGNC: | 24051 |
UniProt: | Q6ZN18B3KXA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.51e-32 | 114 |
neural tube | 6.51e-15 | 56 |
neural rod | 6.51e-15 | 56 |
future spinal cord | 6.51e-15 | 56 |
neural keel | 6.51e-15 | 56 |
regional part of nervous system | 1.02e-13 | 53 |
regional part of brain | 1.02e-13 | 53 |
regional part of forebrain | 8.71e-13 | 41 |
forebrain | 8.71e-13 | 41 |
anterior neural tube | 8.71e-13 | 41 |
future forebrain | 8.71e-13 | 41 |
neurectoderm | 3.58e-12 | 86 |
brain | 1.23e-11 | 68 |
future brain | 1.23e-11 | 68 |
nervous system | 2.32e-11 | 89 |
central nervous system | 2.59e-11 | 81 |
neural plate | 3.64e-11 | 82 |
presumptive neural plate | 3.64e-11 | 82 |
brain grey matter | 5.23e-10 | 34 |
gray matter | 5.23e-10 | 34 |
telencephalon | 8.89e-10 | 34 |
regional part of telencephalon | 3.68e-09 | 32 |
cerebral hemisphere | 4.87e-09 | 32 |
organ system subdivision | 3.93e-08 | 223 |
pre-chordal neural plate | 3.95e-08 | 61 |
regional part of cerebral cortex | 2.31e-07 | 22 |
ectoderm-derived structure | 7.42e-07 | 171 |
ectoderm | 7.42e-07 | 171 |
presumptive ectoderm | 7.42e-07 | 171 |
cerebral cortex | 9.91e-07 | 25 |
pallium | 9.91e-07 | 25 |