FFCP PHASE1:Hg19::chr12:29302255..29302266,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:29302255..29302266,+
|short_description=p5@FAR2
|description=CAGE_peak_5_at_FAR2_5end
|association_with_transcript=2bp_to_ENST00000550541_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55711 | |EntrezGene=55711 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25531 | |HGNC=25531 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENST00000550541_5end | |||
|cluster_id=chr12:29302255..29302266,+ | |||
|description=CAGE_peak_5_at_FAR2_5end | |||
|id=chr12:29302255..29302266,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.47e-19!24;CL:0000115!6.15e-17!35;CL:0000071!7.65e-15!18;CL:0002546!7.65e-15!18;CL:0002078!1.64e-11!44;CL:0000213!5.88e-11!57;CL:0000215!5.88e-11!57;CL:1000413!1.68e-08!9;CL:0000222!5.90e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.74e-57;24!CL:0000115;1.28e-44;36!CL:0000071;1.83e-39;18!CL:0002078;3.97e-30;45!CL:1000413;7.25e-24;9!CL:0002544;1.20e-20;6!CL:0002138;8.93e-20;6!CL:0000213;1.84e-19;58!CL:0000215;1.84e-19;58!CL:0002144;5.07e-11;3!CL:0002543;5.80e-09;6!CL:0002545;4.18e-08;2!CL:0000076;9.34e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.52e-58,24;CL:0000115,6.10e-53,36;CL:0002078,5.89e-41,45;CL:0000071,3.81e-40,18;CL:0002546,3.81e-40,18;CL:0000213,5.93e-33,58;CL:0000215,5.93e-33,58;CL:1000413,4.94e-24,9;CL:0002544,1.04e-20,6;CL:0005020,3.71e-20,6;CL:0002138,3.71e-20,6;CL:0005022,3.71e-20,6;CL:0000222,2.28e-13,121;CL:0002144,4.97e-11,3;CL:0000076,4.01e-10,63;CL:0002543,2.29e-09,6;CL:0002545,4.51e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002546;1.83e-39;18!CL:0005022;8.93e-20;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!7.65e-15!18;UBERON:0004638!7.65e-15!18;UBERON:0004852!7.65e-15!18;UBERON:0000487!1.78e-11!22;UBERON:0004535!9.81e-10!110;UBERON:0001009!1.93e-09!113;UBERON:0006914!4.94e-09!25;UBERON:0002049!5.71e-09!79;UBERON:0007798!5.71e-09!79;UBERON:0002619!1.41e-08!22;UBERON:0003915!1.68e-08!9;UBERON:0004700!1.68e-08!9;UBERON:0001917!1.68e-08!9;UBERON:0000055!2.73e-08!69;UBERON:0001950!5.86e-08!20;UBERON:0004872!9.58e-08!84;UBERON:0000956!1.80e-07!25;UBERON:0000203!1.80e-07!25;UBERON:0001869!1.85e-07!32;UBERON:0000477!2.07e-07!286;UBERON:0004111!4.06e-07!241;UBERON:0001893!4.26e-07!34;UBERON:0007023!5.71e-07!115;UBERON:0002020!7.76e-07!34;UBERON:0003528!7.76e-07!34;UBERON:0000025!8.09e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.83e-39;18!UBERON:0001986;1.83e-39;18!UBERON:0004852;1.83e-39;18!UBERON:0000487;1.43e-31;22!UBERON:0006914;2.60e-27;25!UBERON:0003915;7.25e-24;9!UBERON:0004700;7.25e-24;9!UBERON:0001917;7.25e-24;9!UBERON:0000490;3.68e-19;33!UBERON:0001473;1.18e-14;8!UBERON:0004536;1.18e-14;8!UBERON:0006558;1.18e-14;8!UBERON:0000055;2.32e-12;65!UBERON:0002465;1.41e-11;10!UBERON:0010523;5.07e-11;3!UBERON:0001915;5.07e-11;3!UBERON:0001982;5.07e-11;3!UBERON:0002405;3.82e-10;27!UBERON:0002193;1.64e-08;42!UBERON:0005800;4.18e-08;2!UBERON:0001515;4.18e-08;2!UBERON:0002049;7.47e-08;75!UBERON:0007798;7.47e-08;75!UBERON:0007500;1.14e-07;56!UBERON:0001981;1.14e-07;56!UBERON:0004537;1.14e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.81e-40,18;UBERON:0001986,3.81e-40,18;UBERON:0004852,3.81e-40,18;UBERON:0000487,4.03e-32,22;UBERON:0006914,8.62e-28,25;UBERON:0003915,4.94e-24,9;UBERON:0004700,4.94e-24,9;UBERON:0001917,4.94e-24,9;UBERON:0000055,9.48e-19,68;UBERON:0002049,1.33e-15,78;UBERON:0007798,1.33e-15,78;UBERON:0001473,6.17e-15,8;UBERON:0004536,6.17e-15,8;UBERON:0006558,6.17e-15,8;UBERON:0004535,2.76e-14,109;UBERON:0001009,1.00e-13,112;UBERON:0002465,8.44e-12,10;UBERON:0010523,4.97e-11,3;UBERON:0001915,4.97e-11,3;UBERON:0001982,4.97e-11,3;UBERON:0007500,4.98e-11,59;UBERON:0001981,4.98e-11,59;UBERON:0004537,4.98e-11,59;UBERON:0006965,4.98e-11,59;UBERON:0004872,8.02e-10,83;UBERON:0005800,4.51e-08,2;UBERON:0001515,4.51e-08,2;UBERON:0004111,1.93e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76160263600908,0,0.200544447470142,0.434021741431704,0.671746422719773,0.32389366601898,0.257575567634187,0.581592955118259,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0.426224750532694,0,0,0,0.502497330513487,0,0.217188844705117,0,0,0,0,0,0.419317291016752,0.112328631146495,0.450530678524519,0.64290234678832,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0.493313713811028,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0.950452044448374,0,0,0,0,0.821127996921047,0,0,0,0,0,0.639312809217652,0.361439152384566,1.00267582127178,0,0,0,0.283604451492204,0.221729397462564,0.263504357079378,0.327447688744282,0,0,0,0,0.132957960518865,0,0,0,2.18638648103376,4.30117297553062,1.73570250803797,2.26123176769604,2.51699661725944,2.75118041940067,0.626984899610432,1.8089173141853,1.42306505074684,1.67360306382335,3.62546385398232,1.52054421143703,2.19655851793353,2.20597848207521,2.43042584364528,1.7859945656816,0.44905874525234,0.900891843866578,1.53316637465883,1.89853131913626,4.21364011039937,1.31780417436063,0,0,0,0,0,0.573673241497627,0,0,0,0.24666754841716,0.933633106199299,1.0776853765575,0.653847612453835,0.454072282934794,0,0.234321431833797,0.624320153660641,1.71141546463335,0.298897361103602,0.117434498643765,0,0.140450806702248,0.204154171254893,0.122834317311768,0.309977343527296,0,0,0,0,0.168336113954066,0,1.10825646193673,0,0,0,0.340296549480063,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,1.09776335516636,0.397589304964456,0,0.10366105501537,0.756962552626885,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0,0.514703430895577,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.234817388471643,3.3204282985047,2.31492756288305,2.28304982681518,0,0,0.492434012174795,0.468008530278475,0.891786973732369,0,0.16798212819886,0,0,0,0,0.492663237895943,1.23267807618516,0.621984346622316,0.288239906833923,0.25248486685276,1.26995788584338,0.381988425558278,0,0,0.411309970813294,0.600686115687835,0.285826432630578,0.560655421726804,0.43596006883328,0.36669142910475,0.129271715757778,0,0,0.797814349754612,0,0,0,0,0,0,0,1.30294473717494,0,0,0,1.74306691720059,0.099972991182057,0,0.502257091432126,0,1.67737398844108,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0.60818530127658,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0.462629081407967,0,0.0821271560138091,0.519254429183621,0.232420756919918,0,0.200506470303285,0,0.114814448164607,0.546273504020151,0.262248829918848,0,0.616122696835318,0,0,0.633309773357254,1.13733384070897,1.19065593693561,2.59099099322567,0,0,0,0.509752546090077,0,0,0,0,0.512900250232778,0,0.325378394664303,0.309123034943167,0,0,0,0,0,0.290012154876366,0.462145851343933,0,0,0.214840489736547,0.435050081742686,0.426133137080504,0.178064071293475,0.165284915360978,0,0,0.10115778085555,0.464845549297286,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0.731140468893853,0,0,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,2.02979043692868,0,0,0.952927101831156,0,2.59389324477087,1.08006287447623,0,0,0,0,0,0,0.0711418433484141,0,0,0.957526850661834,1.48171507906718,0.649243880549111,0.842391534340376,0,0.156679895773023,0,1.69291777801603,0,0,0.851692475380653,1.71752672377882,0.614481528616916,0.447352215784832,0.834245708559542,0,0,0,2.70455678475983,2.33150377598474,0,0.18714054040822,0.439524537815682,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0.333926115068718,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.463840490809256,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.384751292518985,0,0,0,0.217294743844016,0,0.457987967009312,0.533034776018635,0,1.8837630767403,0.166211681900156,0,0,0,0,0.794682894901893,0,0,0,0.432777279484182,0,0.353830258013357,0.611030144933625,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0.207376382794494,0.664653872707185,0.661983911750998,0,1.19472429772959,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.451961481561065,0.685209623233754,0,1.32952671507345,0.195551382734803,0,0,0.799238438328521,0,0,0.343189995723929,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,1.27746588066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| ||
|short_description=p5@FAR2 | |||
}} | }} |
Latest revision as of 01:42, 18 September 2015
Short description: | p5@FAR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FAR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000550541_5end |
EntrezGene: | FAR2 |
HGNC: | 25531 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.52e-58 | 24 |
endothelial cell | 6.10e-53 | 36 |
meso-epithelial cell | 5.89e-41 | 45 |
blood vessel endothelial cell | 3.81e-40 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.81e-40 | 18 |
lining cell | 5.93e-33 | 58 |
barrier cell | 5.93e-33 | 58 |
endothelial cell of artery | 4.94e-24 | 9 |
aortic endothelial cell | 1.04e-20 | 6 |
lymphangioblast | 3.71e-20 | 6 |
endothelial cell of lymphatic vessel | 3.71e-20 | 6 |
vascular lymphangioblast | 3.71e-20 | 6 |
mesodermal cell | 2.28e-13 | 121 |
capillary endothelial cell | 4.97e-11 | 3 |
squamous epithelial cell | 4.01e-10 | 63 |
vein endothelial cell | 2.29e-09 | 6 |
thoracic aorta endothelial cell | 4.51e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.81e-40 | 18 |
endothelium | 3.81e-40 | 18 |
cardiovascular system endothelium | 3.81e-40 | 18 |
simple squamous epithelium | 4.03e-32 | 22 |
squamous epithelium | 8.62e-28 | 25 |
endothelial tube | 4.94e-24 | 9 |
arterial system endothelium | 4.94e-24 | 9 |
endothelium of artery | 4.94e-24 | 9 |
vessel | 9.48e-19 | 68 |
vasculature | 1.33e-15 | 78 |
vascular system | 1.33e-15 | 78 |
lymphatic vessel | 6.17e-15 | 8 |
lymph vasculature | 6.17e-15 | 8 |
lymphatic part of lymphoid system | 6.17e-15 | 8 |
cardiovascular system | 2.76e-14 | 109 |
circulatory system | 1.00e-13 | 112 |
lymphoid system | 8.44e-12 | 10 |
microcirculatory vessel | 4.97e-11 | 3 |
endothelium of capillary | 4.97e-11 | 3 |
capillary | 4.97e-11 | 3 |
epithelial tube open at both ends | 4.98e-11 | 59 |
blood vessel | 4.98e-11 | 59 |
blood vasculature | 4.98e-11 | 59 |
vascular cord | 4.98e-11 | 59 |
splanchnic layer of lateral plate mesoderm | 8.02e-10 | 83 |
segment of aorta | 4.51e-08 | 2 |
thoracic aorta | 4.51e-08 | 2 |
anatomical conduit | 1.93e-07 | 240 |