FFCP PHASE1:Hg19::chr1:100111394..100111419,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54873 | |EntrezGene=54873 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15846 | |HGNC=15846 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NP74 | |UniProt=Q9NP74 | ||
|association_with_transcript=-11bp_to_NM_017734,uc001dsf.2,uc001dsg.2_5end | |association_with_transcript=-11bp_to_NM_017734,uc001dsf.2,uc001dsg.2_5end | ||
|cluster_id=chr1:100111394..100111419,+ | |||
|description=CAGE_peak_6_at_PALMD_5end | |description=CAGE_peak_6_at_PALMD_5end | ||
|id=chr1:100111394..100111419,+ | |id=chr1:100111394..100111419,+ | ||
|ontology_enrichment_celltype=CL:0002139!7.06e-13!24;CL:0000071!1.36e-08!18;CL:0002546!1.36e-08!18;CL:0000115!9.60e-08!35;CL:0000066!3.55e-07!254 | |ontology_enrichment_celltype=CL:0002139!7.06e-13!24;CL:0000071!1.36e-08!18;CL:0002546!1.36e-08!18;CL:0000115!9.60e-08!35;CL:0000066!3.55e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.97e-10;24!CL:0000071;3.85e-09;18!CL:0002618;8.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.92e-10,24;CL:0000071,2.29e-09,18;CL:0002546,2.29e-09,18;CL:0002618,6.49e-08,3;CL:0000115,3.50e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.39e-19;29!UBERON:0001041;9.62e-10;30!CL:0002546;3.85e-09;18!UBERON:0006595;4.33e-09;86!UBERON:0003104;1.54e-07;31!UBERON:0009497;7.78e-07;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.99e-21!115;UBERON:0000477!3.69e-20!286;UBERON:0004111!1.36e-17!241;UBERON:0000025!5.17e-14!194;UBERON:0000481!1.30e-12!347;UBERON:0000467!5.33e-11!625;UBERON:0001041!6.19e-11!98;UBERON:0000480!6.80e-11!626;UBERON:0004921!1.22e-10!129;UBERON:0004185!1.22e-10!129;UBERON:0000468!4.65e-10!659;UBERON:0001004!9.76e-10!72;UBERON:0000483!1.45e-09!309;UBERON:0001007!2.28e-09!155;UBERON:0001555!2.28e-09!155;UBERON:0007026!2.28e-09!155;UBERON:0001737!2.36e-09!9;UBERON:0000119!3.36e-09!312;UBERON:0001048!1.05e-08!168;UBERON:0001986!1.36e-08!18;UBERON:0004638!1.36e-08!18;UBERON:0004852!1.36e-08!18;UBERON:0000065!1.52e-08!53;UBERON:0004119!2.25e-08!169;UBERON:0000925!2.25e-08!169;UBERON:0006595!2.25e-08!169;UBERON:0008947!3.01e-08!38;UBERON:0003258!3.01e-08!38;UBERON:0000922!3.44e-08!612;UBERON:0001557!3.48e-08!19;UBERON:0000063!3.68e-08!97;UBERON:0000077!4.65e-08!130;UBERON:0002050!4.86e-08!605;UBERON:0005423!4.86e-08!605;UBERON:0000072!6.42e-08!46;UBERON:0000923!9.16e-08!604;UBERON:0005291!9.16e-08!604;UBERON:0006598!9.16e-08!604;UBERON:0002532!9.16e-08!604;UBERON:0000487!1.77e-07!22;UBERON:0000062!1.99e-07!511;UBERON:0003075!2.56e-07!86;UBERON:0007284!2.56e-07!86;UBERON:0000153!3.14e-07!129;UBERON:0007811!3.14e-07!129;UBERON:0006914!7.74e-07!25;UBERON:0000055!9.53e-07!69;UBERON:0003914!9.92e-07!118;UBERON:0000033!9.92e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!4.99e-21!115;UBERON:0000477!3.69e-20!286;UBERON:0004111!1.36e-17!241;UBERON:0000025!5.17e-14!194;UBERON:0000481!1.30e-12!347;UBERON:0000467!5.33e-11!625;UBERON:0001041!6.19e-11!98;UBERON:0000480!6.80e-11!626;UBERON:0004921!1.22e-10!129;UBERON:0004185!1.22e-10!129;UBERON:0000468!4.65e-10!659;UBERON:0001004!9.76e-10!72;UBERON:0000483!1.45e-09!309;UBERON:0001007!2.28e-09!155;UBERON:0001555!2.28e-09!155;UBERON:0007026!2.28e-09!155;UBERON:0001737!2.36e-09!9;UBERON:0000119!3.36e-09!312;UBERON:0001048!1.05e-08!168;UBERON:0001986!1.36e-08!18;UBERON:0004638!1.36e-08!18;UBERON:0004852!1.36e-08!18;UBERON:0000065!1.52e-08!53;UBERON:0004119!2.25e-08!169;UBERON:0000925!2.25e-08!169;UBERON:0006595!2.25e-08!169;UBERON:0008947!3.01e-08!38;UBERON:0003258!3.01e-08!38;UBERON:0000922!3.44e-08!612;UBERON:0001557!3.48e-08!19;UBERON:0000063!3.68e-08!97;UBERON:0000077!4.65e-08!130;UBERON:0002050!4.86e-08!605;UBERON:0005423!4.86e-08!605;UBERON:0000072!6.42e-08!46;UBERON:0000923!9.16e-08!604;UBERON:0005291!9.16e-08!604;UBERON:0006598!9.16e-08!604;UBERON:0002532!9.16e-08!604;UBERON:0000487!1.77e-07!22;UBERON:0000062!1.99e-07!511;UBERON:0003075!2.56e-07!86;UBERON:0007284!2.56e-07!86;UBERON:0000153!3.14e-07!129;UBERON:0007811!3.14e-07!129;UBERON:0006914!7.74e-07!25;UBERON:0000055!9.53e-07!69;UBERON:0003914!9.92e-07!118;UBERON:0000033!9.92e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.94e-19;9!UBERON:0001557;1.94e-19;9!UBERON:0000072;5.50e-11;37!UBERON:0004638;3.85e-09;18!UBERON:0001986;3.85e-09;18!UBERON:0004852;3.85e-09;18!UBERON:0000487;5.86e-09;22!UBERON:0000065;2.92e-08;44!UBERON:0002365;4.53e-08;31!UBERON:0002330;4.53e-08;31!UBERON:0006914;1.21e-07;25!UBERON:0001004;9.41e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,1.27e-20,87;UBERON:0001737,9.34e-20,9;UBERON:0004921,4.72e-17,118;UBERON:0008947,6.89e-14,38;UBERON:0003258,6.89e-14,38;UBERON:0001557,1.03e-12,19;UBERON:0011216,1.71e-12,223;UBERON:0001007,3.66e-12,145;UBERON:0001555,3.66e-12,145;UBERON:0007026,3.66e-12,145;UBERON:0000072,6.66e-12,47;UBERON:0001048,2.47e-11,160;UBERON:0001004,2.63e-11,74;UBERON:0000065,4.89e-11,54;UBERON:0004111,1.62e-10,240;UBERON:0004119,3.42e-10,160;UBERON:0000925,3.42e-10,160;UBERON:0006595,3.42e-10,160;UBERON:0004638,2.29e-09,18;UBERON:0001986,2.29e-09,18;UBERON:0004852,2.29e-09,18;UBERON:0000487,3.71e-09,22;UBERON:0000025,1.56e-08,192;UBERON:0007023,1.79e-08,114;UBERON:0002365,2.29e-08,31;UBERON:0002330,2.29e-08,31;UBERON:0006914,8.18e-08,25;UBERON:0007499,5.26e-07,25;UBERON:0003914,6.43e-07,117 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.189069634328136,0,0.087834785693126,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,1.67799774483962,2.20094433552054,1.25396979922086,0.775250277507987,2.13459757612026,4.68608857870538,0.805658634218294,0.760272105718513,1.46437234528902,1.83831540172934,4.86085168729056,3.12549048994279,1.34717623575702,1.35133776579987,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0.404132016209064,0.980771418680752,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.680593098960126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65629520055781,1.34867752062481,2.89213235860178,1.32352767278873,1.30727666455444,2.13543557199987,1.07865046528132,1.56977172100277,1.53898862778556,0,0,0,0,6.33775174109154,0.982827216677626,7.08947888017685,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.352226082707465,0.866198686566443,0.462985512576611,0.761016608938393,0,0,0,0,0.148631162288728,0,0.335964256397719,0.425325291727159,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.510281115829547,1.51141141271498,0,0,0,0,0,0,0,0,0,0.328014645699706,0,4.43076350085206,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,1.31535265576129,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,4.14232723417828,0,0,0,0,0,0,0,0,0,0,0,0,5.34120355637366,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63714722689409,0.121360521749513,0,0,0,0,0,1.9882952955326,1.1253553312841,0,0,0,0.398495976502139,0.828851746593443,0.251932747854276,0.102268682502155,0,0.311039587661807,0,1.07412704805365,0,0.295930216910801,0,0,0,0.185536196323703,0,0,2.44887999989348,0.724999575434793,0.568967241427498,2.2882828526349,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0.32681539055697,0.139423744278603,0.846452843541768,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0.588187602953219,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.269604531922708,3.21031058919516,0,0,0.19566461893209,0,0,0,0.61214552326098,0.442306057399416,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0.698906672968121,0,0.0967563312890851,0.219267951258557,0.0821154570532092,1.06687918137261,0,0.90392296312213,0.137041924646751,0,0.126621591911757,0,0.400794101257669,0,9.19124204077799,0,0.458146384663663,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0.859530882839914,0,1.39641200636127,2.97908551215189,0.717873024576814,0.998395002494955,2.14613024068285,3.34757186162809,3.02325626190268,0,0,4.6482077561262,4.20320877743949,4.58344098208457,0.0984274815147488,0,0,0.544813624446302,0,0,0,0,0,0.0607495566580247,0.670869375198532,0.157611414598396,0.104909176269996,0,1.07572403599707,0,2.1440859791201,5.29673576292345,0,0,2.5926644736038,0.326587360109409,0,0,0,0,5.56898487976713,5.30027555648885,0.258565912723101,0.39669780522807,0.171086837884329,8.45778026780006,0.747511887973863,1.25763444079733,0,0,0,0,1.27668251554036,0.544017803369474,1.0027595760908,0.919036730290385,0.655745261419609,0,0,0.366078794705889,0.1251909307065,4.0138643698305,2.3295100822739,0.248385611765534,6.77908311187531,3.99937305478741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0.970423302570136,0,0,0,0,0,0,0,0,0.80057074828547,0,0.3062454773532,0,0,0,0,0.252071696221718,0,0.161475645631851,1.42769420259154,0.588886311006154,0.471878893390961,0.183428598521679,0,0,0,0,1.12815492523886,0,0,0,0,0,0,0,0,0.126831620387814,1.64092442705466,12.061670870858,0.496211178389294,0,2.42748612515231,2.14280734351315,1.00885116665647,0,0.227662191351298,0.975726071789027,0,0.342976018874837,0.203909198930495,0.0657727735628491,0,1.00108261702862,1.0989032999072,0.314231179832004,0,0,0.863710364874486,0,0.714765441766563,3.00225862292181,0,0,0,0.62164849248911,0,0,6.88363774112444,0,0,0,0.4582137370881,0,0,0,0,0,1.29485767437579,1.33461648913121,1.1598144313382,3.39997695141398,0,0,0,0.11294608203896,17.2606611290324,1.05673990496671,0.154348316215889,0.218559560503957,0,0.245148321753905,0.9427061884065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| ||
|short_description=p6@PALMD | |short_description=p6@PALMD | ||
}} | }} |
Latest revision as of 03:05, 25 September 2015
Short description: | p6@PALMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PALMD_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_NM_017734, uc001dsf.2, uc001dsg.2_5end |
EntrezGene: | PALMD |
HGNC: | 15846 |
UniProt: | Q9NP74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.92e-10 | 24 |
blood vessel endothelial cell | 2.29e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.29e-09 | 18 |
endothelial cell of umbilical vein | 6.49e-08 | 3 |
endothelial cell | 3.50e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
foregut | 1.27e-20 | 87 |
larynx | 9.34e-20 | 9 |
subdivision of digestive tract | 4.72e-17 | 118 |
respiratory primordium | 6.89e-14 | 38 |
endoderm of foregut | 6.89e-14 | 38 |
upper respiratory tract | 1.03e-12 | 19 |
organ system subdivision | 1.71e-12 | 223 |
digestive system | 3.66e-12 | 145 |
digestive tract | 3.66e-12 | 145 |
primitive gut | 3.66e-12 | 145 |
segment of respiratory tract | 6.66e-12 | 47 |
primordium | 2.47e-11 | 160 |
respiratory system | 2.63e-11 | 74 |
respiratory tract | 4.89e-11 | 54 |
anatomical conduit | 1.62e-10 | 240 |
endoderm-derived structure | 3.42e-10 | 160 |
endoderm | 3.42e-10 | 160 |
presumptive endoderm | 3.42e-10 | 160 |
blood vessel endothelium | 2.29e-09 | 18 |
endothelium | 2.29e-09 | 18 |
cardiovascular system endothelium | 2.29e-09 | 18 |
simple squamous epithelium | 3.71e-09 | 22 |
tube | 1.56e-08 | 192 |
adult organism | 1.79e-08 | 114 |
exocrine gland | 2.29e-08 | 31 |
exocrine system | 2.29e-08 | 31 |
squamous epithelium | 8.18e-08 | 25 |
epithelial sac | 5.26e-07 | 25 |
epithelial tube | 6.43e-07 | 117 |