FFCP PHASE1:Hg19::chr1:12123219..12123228,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=943 | |EntrezGene=943 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11923 | |HGNC=11923 | ||
|TSSclassifier=strong | |||
|UniProt=P28908 | |UniProt=P28908 | ||
|association_with_transcript=-205bp_to_ENST00000263932,NM_001243,uc001atq.2,uc010obc.1_5end | |association_with_transcript=-205bp_to_ENST00000263932,NM_001243,uc001atq.2,uc010obc.1_5end | ||
|cluster_id=chr1:12123219..12123228,+ | |||
|coexpression_cluster_id=C920 | |||
|description=CAGE_peak_6_at_TNFRSF8_5end | |description=CAGE_peak_6_at_TNFRSF8_5end | ||
|id=chr1:12123219..12123228,+ | |id=chr1:12123219..12123228,+ | ||
|ontology_enrichment_celltype=CL:0002322!5.52e-19!5;CL:0000838!8.64e-15!52;CL:0000542!1.95e-14!53;CL:0000051!1.95e-14!53;CL:0000945!6.92e-14!24;CL:0000826!6.92e-14!24;CL:0000988!7.26e-13!182;CL:0000453!9.01e-12!5;CL:0002032!1.98e-11!165;CL:0000837!1.98e-11!165;CL:0000037!1.09e-10!172;CL:0000566!1.09e-10!172;CL:0001014!1.67e-08!2;CL:0001016!1.67e-08!2;CL:0000785!3.76e-08!2;CL:0000955!3.76e-08!2;CL:0000818!3.76e-08!2;CL:0000954!3.76e-08!2;CL:0000816!3.76e-08!2 | |ontology_enrichment_celltype=CL:0002322!5.52e-19!5;CL:0000838!8.64e-15!52;CL:0000542!1.95e-14!53;CL:0000051!1.95e-14!53;CL:0000945!6.92e-14!24;CL:0000826!6.92e-14!24;CL:0000988!7.26e-13!182;CL:0000453!9.01e-12!5;CL:0002032!1.98e-11!165;CL:0000837!1.98e-11!165;CL:0000037!1.09e-10!172;CL:0000566!1.09e-10!172;CL:0001014!1.67e-08!2;CL:0001016!1.67e-08!2;CL:0000785!3.76e-08!2;CL:0000955!3.76e-08!2;CL:0000818!3.76e-08!2;CL:0000954!3.76e-08!2;CL:0000816!3.76e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.26e-17;24!CL:0000542;3.37e-12;53!CL:0000540;1.53e-08;6!CL:0000404;1.53e-08;6!CL:0000084;6.93e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.23e-21,52;CL:0000542,5.95e-21,53;CL:0000051,5.95e-21,53;CL:0000945,3.46e-17,24;CL:0000826,3.46e-17,24;CL:0000988,1.77e-09,177;CL:0002087,6.96e-09,115;CL:0000540,1.47e-08,6;CL:0000031,1.47e-08,6;CL:0000404,1.47e-08,6;CL:0002031,1.84e-08,120;CL:0000084,6.74e-08,25;CL:0000827,6.74e-08,25;CL:0000738,2.56e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;3.37e-12;53!CL:0000031;1.53e-08;6 | |||
|ontology_enrichment_disease=DOID:2531!1.28e-23!51;DOID:0060083!1.28e-23!51;DOID:0060058!3.74e-18!10;DOID:1036!9.63e-11!8;DOID:1240!1.29e-10!39;DOID:74!2.71e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.37e-29;10!DOID:2355;2.18e-13;1!DOID:630;4.77e-13;1!DOID:0050177;4.77e-13;1!DOID:0060060;4.77e-13;1!DOID:0060061;4.77e-13;1!DOID:0050427;4.77e-13;1!DOID:8691;4.77e-13;1!DOID:74;2.50e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.29e-29,10;DOID:2355,2.32e-13,1;DOID:0060060,3.76e-13,1;DOID:0060061,3.76e-13,1;DOID:8691,3.76e-13,1;DOID:630,4.77e-13,1;DOID:0050177,4.77e-13,1;DOID:0050427,4.77e-13,1;DOID:2531,4.92e-08,51;DOID:0060083,4.92e-08,51;DOID:74,2.58e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004177!4.66e-08!7;UBERON:0002370!5.37e-08!4;UBERON:0005058!5.37e-08!4;UBERON:0009113!5.37e-08!4;UBERON:0003295!5.37e-08!4;UBERON:0005562!5.37e-08!4 | |ontology_enrichment_uberon=UBERON:0004177!4.66e-08!7;UBERON:0002370!5.37e-08!4;UBERON:0005058!5.37e-08!4;UBERON:0009113!5.37e-08!4;UBERON:0003295!5.37e-08!4;UBERON:0005562!5.37e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.38e-11;10!UBERON:0000178;9.72e-08;15!UBERON:0000179;9.72e-08;15!UBERON:0000463;9.72e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.30e-11,10;UBERON:0000358,2.30e-11,10;UBERON:0000307,2.30e-11,10;UBERON:0000091,2.30e-11,10;UBERON:0000087,2.30e-11,10;UBERON:0007010,2.30e-11,10;UBERON:0007806,2.30e-11,10;UBERON:0008780,2.30e-11,10;UBERON:0005728,2.30e-11,10;UBERON:0000178,9.50e-08,15;UBERON:0000179,9.50e-08,15;UBERON:0000463,9.50e-08,15 | |||
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| ||
|short_description=p6@TNFRSF8 | |short_description=p6@TNFRSF8 | ||
}} | }} |
Latest revision as of 12:57, 16 September 2015
Short description: | p6@TNFRSF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TNFRSF8_5end |
Coexpression cluster: | C920_anaplastic_adult_hereditary_cord_hairy_immature_xeroderma |
Association with transcript: | -205bp_to_ENST00000263932, NM_001243, uc001atq.2, uc010obc.1_5end |
EntrezGene: | TNFRSF8 |
HGNC: | 11923 |
UniProt: | P28908 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.23e-21 | 52 |
lymphocyte | 5.95e-21 | 53 |
common lymphoid progenitor | 5.95e-21 | 53 |
lymphocyte of B lineage | 3.46e-17 | 24 |
pro-B cell | 3.46e-17 | 24 |
hematopoietic cell | 1.77e-09 | 177 |
nongranular leukocyte | 6.96e-09 | 115 |
neuron | 1.47e-08 | 6 |
neuroblast | 1.47e-08 | 6 |
electrically signaling cell | 1.47e-08 | 6 |
hematopoietic lineage restricted progenitor cell | 1.84e-08 | 120 |
T cell | 6.74e-08 | 25 |
pro-T cell | 6.74e-08 | 25 |
leukocyte | 2.56e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.30e-11 | 10 |
blastocyst | 2.30e-11 | 10 |
blastula | 2.30e-11 | 10 |
bilaminar disc | 2.30e-11 | 10 |
inner cell mass | 2.30e-11 | 10 |
cleaving embryo | 2.30e-11 | 10 |
connecting stalk | 2.30e-11 | 10 |
inner cell mass derived epiblast | 2.30e-11 | 10 |
extraembryonic mesoderm | 2.30e-11 | 10 |
blood | 9.50e-08 | 15 |
haemolymphatic fluid | 9.50e-08 | 15 |
organism substance | 9.50e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.29e-29 | 10 |
anemia | 2.32e-13 | 1 |
non-Hodgkin lymphoma | 3.76e-13 | 1 |
cutaneous T cell lymphoma | 3.76e-13 | 1 |
mycosis fungoides | 3.76e-13 | 1 |
genetic disease | 4.77e-13 | 1 |
monogenic disease | 4.77e-13 | 1 |
xeroderma pigmentosum | 4.77e-13 | 1 |
hematologic cancer | 4.92e-08 | 51 |
immune system cancer | 4.92e-08 | 51 |
hematopoietic system disease | 2.58e-07 | 2 |