FFCP PHASE1:Hg19::chr1:145726810..145726835,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5174 | |EntrezGene=5174 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8821 | |HGNC=8821 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-82bp_to_ENST00000443667_5end | |association_with_transcript=-82bp_to_ENST00000443667_5end | ||
|cluster_id=chr1:145726810..145726835,+ | |||
|description=CAGE_peak_4_at_PDZK1_5end | |description=CAGE_peak_4_at_PDZK1_5end | ||
|id=chr1:145726810..145726835,+ | |id=chr1:145726810..145726835,+ | ||
|ontology_enrichment_celltype=CL:0000223!2.00e-12!59;CL:0000181!3.63e-11!12;CL:0000417!3.63e-11!12;CL:0000668!3.63e-11!12;CL:0000414!3.63e-11!12;CL:0000412!3.63e-11!12;CL:0000182!3.63e-11!12;CL:0000066!1.40e-09!254;CL:0000349!2.28e-07!3;CL:0002577!2.28e-07!3;CL:0002621!3.36e-07!3;CL:0002076!9.54e-07!43 | |ontology_enrichment_celltype=CL:0000223!2.00e-12!59;CL:0000181!3.63e-11!12;CL:0000417!3.63e-11!12;CL:0000668!3.63e-11!12;CL:0000414!3.63e-11!12;CL:0000412!3.63e-11!12;CL:0000182!3.63e-11!12;CL:0000066!1.40e-09!254;CL:0000349!2.28e-07!3;CL:0002577!2.28e-07!3;CL:0002621!3.36e-07!3;CL:0002076!9.54e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.07e-11;12!CL:0002166;1.40e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.80e-11,58;CL:0000182,2.19e-11,12;CL:0000066,1.70e-09,253;CL:0002166,1.18e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.98e-08;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.21e-11!14;UBERON:0000158!7.21e-11!14;UBERON:0001987!8.81e-09!4;UBERON:0004340!8.81e-09!4;UBERON:0005172!1.08e-08!55;UBERON:0005173!1.08e-08!55;UBERON:0002107!4.65e-08!19;UBERON:0006925!4.65e-08!19;UBERON:0008836!4.65e-08!19;UBERON:0009854!9.39e-08!23;UBERON:0002417!2.14e-07!61;UBERON:0000916!2.14e-07!61;UBERON:0003124!2.32e-07!7;UBERON:0001949!3.36e-07!3;UBERON:0009497!4.36e-07!25;UBERON:0000015!4.36e-07!25;UBERON:0002423!4.36e-07!25;UBERON:0006235!4.36e-07!25;UBERON:0004161!4.36e-07!25;UBERON:0003929!9.26e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.41e-12;2!UBERON:0002757;2.41e-12;2!UBERON:0010134;2.41e-12;2!UBERON:0005408;2.41e-12;2!UBERON:0001899;2.41e-12;2!UBERON:0003929;1.05e-07;7!UBERON:0002423;1.92e-07;25!UBERON:0001301;4.01e-07;1!UBERON:0002107;4.06e-07;19!UBERON:0006925;4.06e-07;19!UBERON:0002368;7.93e-07;33!UBERON:0003350;8.53e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.41e-12,2;UBERON:0002757,1.41e-12,2;UBERON:0010134,1.41e-12,2;UBERON:0005408,1.41e-12,2;UBERON:0001899,1.41e-12,2;UBERON:0005172,1.83e-10,54;UBERON:0005173,1.83e-10,54;UBERON:0002417,3.25e-09,60;UBERON:0000916,3.25e-09,60;UBERON:0003929,1.82e-08,54;UBERON:0009497,2.09e-07,25;UBERON:0000015,2.09e-07,25;UBERON:0002423,2.09e-07,25;UBERON:0006235,2.09e-07,25;UBERON:0004161,2.09e-07,25;UBERON:0001301,3.78e-07,1;UBERON:0002107,4.21e-07,19;UBERON:0006925,4.21e-07,19;UBERON:0008836,4.21e-07,19;UBERON:0002368,5.57e-07,35;UBERON:0003350,7.12e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.09220686065086,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0.355009592516614,0.201504196455281,0,0.386521706326594,1.36373060295417,0.573609190778008,0.121973706129595,0,0,0.10366105501537,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,1.77236972004421,0,1.96781501668982,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,8.06314215354526,1.55952606966625,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,1.02090169995667,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,2.07875276582847,0,0,0,0,0,0,0,0.276283915531148,0,2.0453736500431,0.246169610922139,0,0,0,0,0,0,0,0,0,0,1.5625665665114,0,1.44999915086959,0,0,0.236387681767936,0,0,0,0,0,1.52581736317083,0.552896299656123,0.886642856860642,0.219385397153973,0,0,0,0,0,0,0.651884231532048,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,4.08082020397869,2.12029607150911,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27687636823834,0,0,0.293977192243133,0.870592065804026,2.27144668714639,0,0,0,0,0,0,0,0,0,0,1.17330829640882,0,0,0.999048047910651,0,0,1.02956998717179,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,5.82479747637269,1.26053091691558,1.15382201733633,0.808842526250219,0.78741985211799,0,0,0,0,0,0,0,0,0,0,1.57611414598396,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.293104467356165,0,0,0,0,0,0,0,0.828478110694391,0,21.7372795087739,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,1.15761237161917,0,0.358177682162975,0,0,0,0,0,19.474355412684,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.294443155503077,0,0.550285795565037,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82131652290458,1.68141861109412,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0.280272163313789,0,5.18226218924691,4.7775168788705,0,0,0,0,0,0,0,0,0,0,0,0,9.164274741762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437062287854782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.09220686065086,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0.355009592516614,0.201504196455281,0,0.386521706326594,1.36373060295417,0.573609190778008,0.121973706129595,0,0,0.10366105501537,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,1.77236972004421,0,1.96781501668982,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,8.06314215354526,1.55952606966625,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,1.02090169995667,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,2.07875276582847,0,0,0,0,0,0,0,0.276283915531148,0,2.0453736500431,0.246169610922139,0,0,0,0,0,0,0,0,0,0,1.5625665665114,0,1.44999915086959,0,0,0.236387681767936,0,0,0,0,0,1.52581736317083,0.552896299656123,0.886642856860642,0.219385397153973,0,0,0,0,0,0,0.651884231532048,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,4.08082020397869,2.12029607150911,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27687636823834,0,0,0.293977192243133,0.870592065804026,2.27144668714639,0,0,0,0,0,0,0,0,0,0,1.17330829640882,0,0,0.999048047910651,0,0,1.02956998717179,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,5.82479747637269,1.26053091691558,1.15382201733633,0.808842526250219,0.78741985211799,0,0,0,0,0,0,0,0,0,0,1.57611414598396,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.293104467356165,0,0,0,0,0,0,0,0.828478110694391,0,21.7372795087739,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,1.15761237161917,0,0.358177682162975,0,0,0,0,0,19.474355412684,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.294443155503077,0,0.550285795565037,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82131652290458,1.68141861109412,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0.280272163313789,0,5.18226218924691,4.7775168788705,0,0,0,0,0,0,0,0,0,0,0,0,9.164274741762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437062287854782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p4@PDZK1 | |short_description=p4@PDZK1 | ||
}} | }} |
Latest revision as of 18:53, 16 September 2015
Short description: | p4@PDZK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PDZK1_5end |
Coexpression cluster: | NA |
Association with transcript: | -82bp_to_ENST00000443667_5end |
EntrezGene: | PDZK1 |
HGNC: | 8821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.80e-11 | 58 |
hepatocyte | 2.19e-11 | 12 |
epithelial cell | 1.70e-09 | 253 |
epithelial cell of Malassez | 1.18e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.41e-12 | 2 |
regional part of epithalamus | 1.41e-12 | 2 |
secretory circumventricular organ | 1.41e-12 | 2 |
circumventricular organ | 1.41e-12 | 2 |
epithalamus | 1.41e-12 | 2 |
abdomen element | 1.83e-10 | 54 |
abdominal segment element | 1.83e-10 | 54 |
abdominal segment of trunk | 3.25e-09 | 60 |
abdomen | 3.25e-09 | 60 |
gut epithelium | 1.82e-08 | 54 |
epithelium of foregut-midgut junction | 2.09e-07 | 25 |
anatomical boundary | 2.09e-07 | 25 |
hepatobiliary system | 2.09e-07 | 25 |
foregut-midgut junction | 2.09e-07 | 25 |
septum transversum | 2.09e-07 | 25 |
epididymis | 3.78e-07 | 1 |
liver | 4.21e-07 | 19 |
digestive gland | 4.21e-07 | 19 |
liver bud | 4.21e-07 | 19 |
endocrine gland | 5.57e-07 | 35 |
epithelium of mucosa | 7.12e-07 | 8 |